Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:33:11 (4568): wrapper (7.7.26015): starting
02:33:11 (4568): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 02:33:11] Arguments: --nthreads 4
[2025-10-18 02:33:11] Threads: 4
[2025-10-18 02:33:11] Checking for CVMFS
[2025-10-18 02:33:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 02:33:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 02:33:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 02:33:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 02:33:39] 2.11.5.0 4790 0 25436 151834 3 1 2951194 4194304 0 130560 0 0 0.000 1291 59 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-18 02:33:39] CVMFS is ok
[2025-10-18 02:33:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 02:33:39] Checking for apptainer binary...
[2025-10-18 02:33:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 02:33:39] Running /usr/bin/apptainer --version
[2025-10-18 02:33:39] apptainer version 1.0.3
[2025-10-18 02:33:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 02:33:40] TeeC33
[2025-10-18 02:33:40] apptainer works
[2025-10-18 02:33:40] Set ATHENA_PROC_NUMBER=4
[2025-10-18 02:33:40] Set ATHENA_CORE_NUMBER=4
[2025-10-18 02:33:40] Starting ATLAS job with PandaID=6848015388
[2025-10-18 02:33:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 05:47:36]  *** The last 200 lines of the pilot log: ***
[2025-10-18 05:47:36] 2025-10-18 04:46:36,533 | INFO     | time since job start (11544s) is within the limit (172800.0s)
[2025-10-18 05:47:36] 2025-10-18 04:46:36,910 | INFO     | monitor loop #894: job 0:6848015388 is in state 'finished'
[2025-10-18 05:47:36] 2025-10-18 04:46:36,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:47:36] 2025-10-18 04:46:38,539 | INFO     | time since job start (11546s) is within the limit (172800.0s)
[2025-10-18 05:47:36] 2025-10-18 04:46:39,251 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-18 05:47:36] 2025-10-18 04:46:39,252 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3200.0525000000002
[2025-10-18 05:47:36] 2025-10-18 04:46:39,253 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6848015388/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 05:47:36] 2025-10-18 04:46:39,254 | INFO     | extracted standard info from prmon json
[2025-10-18 05:47:36] 2025-10-18 04:46:39,254 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 05:47:36] 2025-10-18 04:46:39,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 05:47:36] 2025-10-18 04:46:39,254 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 05:47:36] 2025-10-18 04:46:39,254 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 05:47:36] 2025-10-18 04:46:39,258 | INFO     | fitting pss+swap vs Time
[2025-10-18 05:47:36] 2025-10-18 04:46:39,259 | INFO     | sum of square deviations: 2060343747.0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,260 | INFO     | sum of deviations: -22665175585.500008
[2025-10-18 05:47:36] 2025-10-18 04:46:39,260 | INFO     | mean x: 1760756979.5
[2025-10-18 05:47:36] 2025-10-18 04:46:39,261 | INFO     | mean y: 2407056.654255319
[2025-10-18 05:47:36] 2025-10-18 04:46:39,261 | INFO     | -- intersect: 19371925449.82078
[2025-10-18 05:47:36] 2025-10-18 04:46:39,261 | INFO     | intersect: 19371925449.82078
[2025-10-18 05:47:36] 2025-10-18 04:46:39,261 | INFO     | chi2: 1.9695601888166514
[2025-10-18 05:47:36] 2025-10-18 04:46:39,261 | INFO     | sum of square deviations: 1900284932.0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,263 | INFO     | sum of deviations: -21645169117.999996
[2025-10-18 05:47:36] 2025-10-18 04:46:39,263 | INFO     | mean x: 1760756827.0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,263 | INFO     | mean y: 2408028.7103825137
[2025-10-18 05:47:36] 2025-10-18 04:46:39,263 | INFO     | -- intersect: 20058284205.119526
[2025-10-18 05:47:36] 2025-10-18 04:46:39,264 | INFO     | intersect: 20058284205.119526
[2025-10-18 05:47:36] 2025-10-18 04:46:39,264 | INFO     | chi2: 1.9668402125333375
[2025-10-18 05:47:36] 2025-10-18 04:46:39,264 | INFO     | current chi2=1.9668402125333375 (change=0.1381006936857359 %)
[2025-10-18 05:47:36] 2025-10-18 04:46:39,264 | INFO     | right removable region: 182
[2025-10-18 05:47:36] 2025-10-18 04:46:39,264 | INFO     | sum of square deviations: 1900284932.0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,266 | INFO     | sum of deviations: -50450992145.0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,266 | INFO     | mean x: 1760757132.0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,266 | INFO     | mean y: 2433192.2841530056
[2025-10-18 05:47:36] 2025-10-18 04:46:39,266 | INFO     | -- intersect: 46749077729.580696
[2025-10-18 05:47:36] 2025-10-18 04:46:39,267 | INFO     | intersect: 46749077729.580696
[2025-10-18 05:47:36] 2025-10-18 04:46:39,267 | INFO     | chi2: 0.3937300889118649
[2025-10-18 05:47:36] 2025-10-18 04:46:39,267 | INFO     | current chi2=0.3937300889118649 (change=80.00923804474209 %)
[2025-10-18 05:47:36] 2025-10-18 04:46:39,267 | INFO     | sum of square deviations: 1748737904.5
[2025-10-18 05:47:36] 2025-10-18 04:46:39,269 | INFO     | sum of deviations: -43860013850.5
[2025-10-18 05:47:36] 2025-10-18 04:46:39,269 | INFO     | mean x: 1760757284.5
[2025-10-18 05:47:36] 2025-10-18 04:46:39,269 | INFO     | mean y: 2426531.691011236
[2025-10-18 05:47:36] 2025-10-18 04:46:39,269 | INFO     | -- intersect: 44163897891.58556
[2025-10-18 05:47:36] 2025-10-18 04:46:39,269 | INFO     | intersect: 44163897891.58556
[2025-10-18 05:47:36] 2025-10-18 04:46:39,270 | INFO     | chi2: 0.3837658004033023
[2025-10-18 05:47:36] 2025-10-18 04:46:39,270 | INFO     | current chi2=0.3837658004033023 (change=2.5307409286652307 %)
[2025-10-18 05:47:36] 2025-10-18 04:46:39,270 | INFO     | left removable region: 20
[2025-10-18 05:47:36] 2025-10-18 04:46:39,270 | INFO     | sum of square deviations: 1318277740.5
[2025-10-18 05:47:36] 2025-10-18 04:46:39,272 | INFO     | sum of deviations: -24802934280.000004
[2025-10-18 05:47:36] 2025-10-18 04:46:39,272 | INFO     | mean x: 1760757406.5
[2025-10-18 05:47:36] 2025-10-18 04:46:39,272 | INFO     | mean y: 2408121.345679012
[2025-10-18 05:47:36] 2025-10-18 04:46:39,272 | INFO     | -- intersect: 33130442445.79595
[2025-10-18 05:47:36] 2025-10-18 04:46:39,272 | INFO     | intersect: 33130442445.79595
[2025-10-18 05:47:36] 2025-10-18 04:46:39,272 | INFO     | chi2: 0.3055151387325434
[2025-10-18 05:47:36] 2025-10-18 04:46:39,272 | INFO     | -- intersect: 33130442445.79595
[2025-10-18 05:47:36] 2025-10-18 04:46:39,273 | INFO     | current memory leak: -18.81 B/s (using 162 data points, chi2=0.31)
[2025-10-18 05:47:36] 2025-10-18 04:46:39,273 | INFO     | could have reported an average CPU frequency of 3123 MHz (10 samples)
[2025-10-18 05:47:36] 2025-10-18 04:46:39,273 | INFO     | ..............................
[2025-10-18 05:47:36] 2025-10-18 04:46:39,273 | INFO     | . Timing measurements:
[2025-10-18 05:47:36] 2025-10-18 04:46:39,273 | INFO     | . get job = 0 s
[2025-10-18 05:47:36] 2025-10-18 04:46:39,273 | INFO     | . initial setup = 9 s
[2025-10-18 05:47:36] 2025-10-18 04:46:39,273 | INFO     | . payload setup = 6 s
[2025-10-18 05:47:36] 2025-10-18 04:46:39,273 | INFO     | . stage-in = 0 s
[2025-10-18 05:47:36] 2025-10-18 04:46:39,273 | INFO     | . payload execution = 11444 s
[2025-10-18 05:47:36] 2025-10-18 04:46:39,273 | INFO     | . stage-out = 50 s
[2025-10-18 05:47:36] 2025-10-18 04:46:39,274 | INFO     | . log creation = 0 s
[2025-10-18 05:47:36] 2025-10-18 04:46:39,274 | INFO     | ..............................
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | 
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | job summary report
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | --------------------------------------------------
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | PanDA job id: 6848015388
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | task id: 46771637
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | errors: (none)
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | pilot state: finished 
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | transexitcode: 0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | exeerrorcode: 0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,376 | INFO     | exeerrordiag: 
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | exitcode: 0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | exitmsg: OK
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | cpuconsumptiontime: 43921 s
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | nevents: 400
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | neventsw: 0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | pid: 15252
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | pgrp: 15252
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | corecount: 4
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | event service: False
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | sizes: {0: 2348101, 1: 2348956, 4: 2349218, 12: 2349246, 11454: 2378611, 11506: 2387791, 11534: 2387929}
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | --------------------------------------------------
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | 
[2025-10-18 05:47:36] 2025-10-18 04:46:39,377 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-18 05:47:36] 2025-10-18 04:46:39,386 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,386 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,386 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,386 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | job 6848015388 has completed (purged errors)
[2025-10-18 05:47:36] 2025-10-18 04:46:39,387 | INFO     | overall cleanup function is called
[2025-10-18 05:47:36] 2025-10-18 04:46:40,394 | INFO     | --- collectZombieJob: --- 10, [15252]
[2025-10-18 05:47:36] 2025-10-18 04:46:40,395 | INFO     | zombie collector waiting for pid 15252
[2025-10-18 05:47:36] 2025-10-18 04:46:40,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 05:47:36] 2025-10-18 04:46:40,395 | INFO     | collected zombie processes
[2025-10-18 05:47:36] 2025-10-18 04:46:40,396 | INFO     | will attempt to kill all subprocesses of pid=15252
[2025-10-18 05:47:36] 2025-10-18 04:46:40,472 | INFO     | process IDs to be killed: [15252] (in reverse order)
[2025-10-18 05:47:36] 2025-10-18 04:46:40,498 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 05:47:36] 2025-10-18 04:46:40,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 05:47:36] 2025-10-18 04:46:40,500 | INFO     | did not find any defunct processes belonging to 15252
[2025-10-18 05:47:36] 2025-10-18 04:46:40,502 | INFO     | did not find any defunct processes belonging to 15252
[2025-10-18 05:47:36] 2025-10-18 04:46:40,502 | INFO     | ready for new job
[2025-10-18 05:47:36] 2025-10-18 04:46:40,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 05:47:36] 2025-10-18 04:46:40,503 | INFO     | ***************************************
[2025-10-18 05:47:36] 2025-10-18 04:46:40,503 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 05:47:36] 2025-10-18 04:46:40,503 | INFO     | ***************************************
[2025-10-18 05:47:36] 2025-10-18 04:46:40,503 | INFO     | 
[2025-10-18 05:47:36] 2025-10-18 04:46:40,523 | INFO     | architecture information:
[2025-10-18 05:47:36] 2025-10-18 04:46:40,524 | INFO     | executing command: cat /etc/os-release
[2025-10-18 05:47:36] 2025-10-18 04:46:40,530 | INFO     | cat /etc/os-release:
[2025-10-18 05:47:36] NAME="CentOS Linux"
[2025-10-18 05:47:36] VERSION="7 (Core)"
[2025-10-18 05:47:36] ID="centos"
[2025-10-18 05:47:36] ID_LIKE="rhel fedora"
[2025-10-18 05:47:36] VERSION_ID="7"
[2025-10-18 05:47:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 05:47:36] ANSI_COLOR="0;31"
[2025-10-18 05:47:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 05:47:36] HOME_URL="https://www.centos.org/"
[2025-10-18 05:47:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 05:47:36] 
[2025-10-18 05:47:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 05:47:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 05:47:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 05:47:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 05:47:36] 
[2025-10-18 05:47:36] 2025-10-18 04:46:40,531 | INFO     | ***************************************
[2025-10-18 05:47:36] 2025-10-18 04:46:41,034 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-18 05:47:36] 2025-10-18 04:46:41,045 | INFO     | sufficient remaining disk space (434157649920 B)
[2025-10-18 05:47:36] 2025-10-18 04:46:41,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 05:47:36] 2025-10-18 04:46:41,046 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 05:47:36] 2025-10-18 04:46:41,046 | INFO     | update_server=False
[2025-10-18 05:47:36] 2025-10-18 04:46:41,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 05:47:36] 2025-10-18 04:46:41,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 05:47:36] 2025-10-18 04:46:41,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:47:36] 2025-10-18 04:46:41,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:47:36] 2025-10-18 04:46:41,048 | INFO     | aborting loop
[2025-10-18 05:47:36] 2025-10-18 04:46:41,128 | INFO     | all payload control threads have been joined
[2025-10-18 05:47:36] 2025-10-18 04:46:41,182 | INFO     | all data control threads have been joined
[2025-10-18 05:47:36] 2025-10-18 04:46:41,714 | INFO     | all job control threads have been joined
[2025-10-18 05:47:36] 2025-10-18 04:46:42,053 | INFO     | [job] retrieve thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:42,054 | INFO     | [job] queue monitor thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:42,054 | INFO     | [job] job monitor thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:42,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 05:47:36] 2025-10-18 04:46:42,134 | INFO     | [payload] control thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:42,188 | INFO     | [data] control thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:42,220 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:42,540 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:42,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:42,631 | INFO     | [payload] validate_post thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:42,720 | INFO     | [job] control thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:43,350 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:43,414 | INFO     | [job] validate thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:43,422 | INFO     | [data] copytool_in thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:43,552 | INFO     | [payload] failed_post thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:44,130 | INFO     | [data] copytool_out thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:46:45,054 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 05:47:36] 2025-10-18 04:47:11,681 | INFO     | PID=8879 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 05:47:36] 2025-10-18 04:47:11,681 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 05:47:36] 2025-10-18 04:47:11,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 05:47:36] 2025-10-18 04:47:11,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 05:47:36] 2025-10-18 04:47:30,233 | INFO     | [monitor] cgroup control has ended
[2025-10-18 05:47:36] 2025-10-18 04:47:31,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790955902784)>', '<ExcThread(monitor, started 139790372562688)>']
[2025-10-18 05:47:36] 2025-10-18 04:47:31,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 05:47:36] 2025-10-18 04:47:31,788 | INFO     | [monitor] control thread has ended
[2025-10-18 05:47:36] 2025-10-18 04:47:36,262 | INFO     | all workflow threads have been joined
[2025-10-18 05:47:36] 2025-10-18 04:47:36,262 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 05:47:36] 2025-10-18 04:47:36,263 | INFO     | traces error code: 0
[2025-10-18 05:47:36] 2025-10-18 04:47:36,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 05:47:36] 2025-10-18 04:47:36,384 [wrapper] ==== pilot stdout END ====
[2025-10-18 05:47:36] 2025-10-18 04:47:36,386 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 05:47:36] 2025-10-18 04:47:36,388 [wrapper] pilotpid: 8879
[2025-10-18 05:47:36] 2025-10-18 04:47:36,389 [wrapper] Pilot exit status: 0
[2025-10-18 05:47:36] 2025-10-18 04:47:36,417 [wrapper] pandaids: 6848015388
[2025-10-18 05:47:36] 2025-10-18 04:47:36,465 [wrapper] cleanup supervisor_pilot  2243 8880
[2025-10-18 05:47:36] 2025-10-18 04:47:36,468 [wrapper] Test setup, not cleaning
[2025-10-18 05:47:36] 2025-10-18 04:47:36,470 [wrapper] apfmon messages muted
[2025-10-18 05:47:36] 2025-10-18 04:47:36,472 [wrapper] ==== wrapper stdout END ====
[2025-10-18 05:47:36] 2025-10-18 04:47:36,474 [wrapper] ==== wrapper stderr END ====
[2025-10-18 05:47:36]  *** Error codes and diagnostics ***
[2025-10-18 05:47:36]     "exeErrorCode": 0,
[2025-10-18 05:47:36]     "exeErrorDiag": "",
[2025-10-18 05:47:36]     "pilotErrorCode": 0,
[2025-10-18 05:47:36]     "pilotErrorDiag": "",
[2025-10-18 05:47:36]  *** Listing of results directory ***
[2025-10-18 05:47:36] total 441608
[2025-10-18 05:47:36] -rw-r--r-- 1 m m    557409 Oct 18 00:20 pilot3.tar.gz
[2025-10-18 05:47:36] -rw-r--r-- 1 m m      5112 Oct 18 00:21 queuedata.json
[2025-10-18 05:47:36] -rwx------ 1 m m     36292 Oct 18 00:22 runpilot2-wrapper.sh
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m       100 Oct 18 02:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 05:47:36] -rwxr-xr-x 1 m m      7986 Oct 18 02:33 run_atlas
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m       105 Oct 18 02:33 job.xml
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m      6015 Oct 18 02:33 init_data.xml
[2025-10-18 05:47:36] -rw-r--r-- 2 m m 229002731 Oct 18 02:33 EVNT.46771634._001484.pool.root.1
[2025-10-18 05:47:36] -rw-r--r-- 2 m m     15120 Oct 18 02:33 start_atlas.sh
[2025-10-18 05:47:36] drwxrwx--x 2 m m      4096 Oct 18 02:33 shared
[2025-10-18 05:47:36] -rw-r--r-- 2 m m    569677 Oct 18 02:33 input.tar.gz
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m         0 Oct 18 02:33 boinc_lockfile
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m      2558 Oct 18 02:33 pandaJob.out
[2025-10-18 05:47:36] -rw------- 1 m m    976749 Oct 18 02:34 agis_schedconf.cvmfs.json
[2025-10-18 05:47:36] drwx------ 5 m m      4096 Oct 18 02:34 pilot3
[2025-10-18 05:47:36] -rw------- 1 m m 215310334 Oct 18 05:44 HITS.46771637._033629.pool.root.1
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m       530 Oct 18 05:44 boinc_task_state.xml
[2025-10-18 05:47:36] -rw------- 1 m m      1030 Oct 18 05:45 memory_monitor_summary.json
[2025-10-18 05:47:36] -rw------- 1 m m   1560740 Oct 18 05:46 agis_ddmendpoints.agis.ALL.json
[2025-10-18 05:47:36] -rw------- 1 m m    369156 Oct 18 05:46 log.46771637._033629.job.log.tgz.1
[2025-10-18 05:47:36] -rw------- 1 m m        95 Oct 18 05:46 pilot_heartbeat.json
[2025-10-18 05:47:36] -rw------- 1 m m      7791 Oct 18 05:46 heartbeat.json
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m      8192 Oct 18 05:47 boinc_mmap_file
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m        28 Oct 18 05:47 wrapper_checkpoint.txt
[2025-10-18 05:47:36] -rw------- 1 m m      4745 Oct 18 05:47 pilotlog.txt
[2025-10-18 05:47:36] -rw------- 1 m m   1625071 Oct 18 05:47 log.46771637._033629.job.log.1
[2025-10-18 05:47:36] -rw------- 1 m m       357 Oct 18 05:47 output.list
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m       620 Oct 18 05:47 runtime_log
[2025-10-18 05:47:36] -rw------- 1 m m   2017280 Oct 18 05:47 result.tar.gz
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m      8618 Oct 18 05:47 runtime_log.err
[2025-10-18 05:47:36] -rw------- 1 m m       645 Oct 18 05:47 mXXNDmDx8T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUIvNDmUV7gSo.diag
[2025-10-18 05:47:36] -rw-rw-r-- 1 m m     20765 Oct 18 05:47 stderr.txt
[2025-10-18 05:47:36] HITS file was successfully produced:
[2025-10-18 05:47:36] -rw------- 1 m m 215310334 Oct 18 05:44 shared/HITS.pool.root.1
[2025-10-18 05:47:36]  *** Contents of shared directory: ***
[2025-10-18 05:47:36] total 436452
[2025-10-18 05:47:36] -rw-r--r-- 2 m m 229002731 Oct 18 02:33 ATLAS.root_0
[2025-10-18 05:47:36] -rw-r--r-- 2 m m     15120 Oct 18 02:33 start_atlas.sh
[2025-10-18 05:47:36] -rw-r--r-- 2 m m    569677 Oct 18 02:33 input.tar.gz
[2025-10-18 05:47:36] -rw------- 1 m m 215310334 Oct 18 05:44 HITS.pool.root.1
[2025-10-18 05:47:36] -rw------- 1 m m   2017280 Oct 18 05:47 result.tar.gz
05:47:38 (4568): run_atlas exited; CPU time 44037.887807
05:47:38 (4568): called boinc_finish(0)

</stderr_txt>
]]>

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