Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:20:02 (725129): wrapper (7.7.26015): starting
18:20:02 (725129): wrapper: running run_atlas (--nthreads 12)
[2025-10-17 18:20:02] Arguments: --nthreads 12
[2025-10-17 18:20:02] Threads: 12
[2025-10-17 18:20:02] Checking for CVMFS
[2025-10-17 18:20:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 18:20:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 18:20:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 18:20:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 18:20:04] 2.11.5.0 2588 39466 215104 151834 1 24 41923974 45568001 28221 130560 0 421178865 99.879 165377136 28579 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-17 18:20:04] CVMFS is ok
[2025-10-17 18:20:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 18:20:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 18:20:04] Further information can be found at the LHC@home message board.
[2025-10-17 18:20:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 18:20:04] Checking for apptainer binary...
[2025-10-17 18:20:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 18:20:04] Running /usr/bin/apptainer --version
[2025-10-17 18:20:05] apptainer version 1.4.1-1.el9
[2025-10-17 18:20:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 18:20:05] wns0080.triumf.lcg
[2025-10-17 18:20:05] apptainer works
[2025-10-17 18:20:06] Set ATHENA_PROC_NUMBER=12
[2025-10-17 18:20:06] Set ATHENA_CORE_NUMBER=12
[2025-10-17 18:20:06] Starting ATLAS job with PandaID=6848015329
[2025-10-17 18:20:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 18:26:55]  *** The last 200 lines of the pilot log: ***
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | WARNING  | wrong length of table data, x=[1760750591.0], y=[1170.0] (must be same and length>=4)
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | could have reported an average CPU frequency of 2736 MHz (4 samples)
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | ..............................
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | . Timing measurements:
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | . get job = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . initial setup = 4 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . payload setup = 41 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . stage-in = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . payload execution = 70 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . stage-out = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . log creation = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | ..............................
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848015329/pilotlog.txt
[2025-10-17 18:26:55] 2025-10-18 01:26:08,969 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-17 18:26:55] - Log from pilotlog.txt -
[2025-10-17 18:26:55] 2025-10-18 01:26:08,785 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6848015329/memory_monitor_summary.json (trf name=prmon)
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | INFO     | extracted standard info from prmon json
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | WARNING  | wrong length of table data, x=[1760750591.0], y=[1170.0] (must be same and length>=4)
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | could have reported an average CPU frequency of 2736 MHz (4 samples)
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | ..............................
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | . Timing measurements:
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | . get job = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . initial setup = 4 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . payload setup = 41 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . stage-in = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . payload execution = 70 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . stage-out = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . log creation = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | ..............................
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848015329/pilotlog.txt
[2025-10-17 18:26:55] 2025-10-18 01:26:08,969 | WARNING  | 
[2025-10-17 18:26:55] [begin log extracts]
[2025-10-17 18:26:55] - Log from pilotlog.txt -
[2025-10-17 18:26:55] 2025-10-18 01:26:08,785 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6848015329/memory_monitor_summary.json (trf name=prmon)
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | INFO     | extracted standard info from prmon json
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 18:26:55] 2025-10-18 01:26:08,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | WARNING  | wrong length of table data, x=[1760750591.0], y=[1170.0] (must be same and length>=4)
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | could have reported an average CPU frequency of 2736 MHz (4 samples)
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | ..............................
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | . Timing measurements:
[2025-10-17 18:26:55] 2025-10-18 01:26:08,810 | INFO     | . get job = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . initial setup = 4 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . payload setup = 41 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . stage-in = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . payload execution = 70 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . stage-out = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | . log creation = 0 s
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | ..............................
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-17 18:26:55] 2025-10-18 01:26:08,811 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848015329/pilotlog.txt
[2025-10-17 18:26:55] [end log extracts]
[2025-10-17 18:26:55] 2025-10-18 01:26:08,969 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-17 18:26:55] 2025-10-18 01:26:08,970 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-17 18:26:55] 2025-10-18 01:26:09,367 | INFO     | 
[2025-10-17 18:26:55] 2025-10-18 01:26:09,367 | INFO     | job summary report
[2025-10-17 18:26:55] 2025-10-18 01:26:09,367 | INFO     | --------------------------------------------------
[2025-10-17 18:26:55] 2025-10-18 01:26:09,367 | INFO     | PanDA job id: 6848015329
[2025-10-17 18:26:55] 2025-10-18 01:26:09,367 | INFO     | task id: 46771637
[2025-10-17 18:26:55] 2025-10-18 01:26:09,367 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-17 18:23:34,426 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-17 18:26:55] 2025-10-18 01:26:09,367 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | pilot state: failed 
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | transexitcode: 65
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | exeerrorcode: 65
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | exitcode: 65
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | cpuconsumptiontime: 19 s
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | nevents: 0
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | neventsw: 0
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | pid: 736336
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | pgrp: 736336
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | corecount: 12
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | event service: False
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | sizes: {0: 2348754, 1: 2348782, 2: 2348981, 13: 2348981, 24: 2349299, 34: 2349327, 117: 2372638, 119: 2376930, 121: 2376958, 259: 2377124}
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | --------------------------------------------------
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | 
[2025-10-17 18:26:55] 2025-10-18 01:26:09,368 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-17 18:26:55] 2025-10-18 01:26:09,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | job 6848015329 has completed (purged errors)
[2025-10-17 18:26:55] 2025-10-18 01:26:09,467 | INFO     | overall cleanup function is called
[2025-10-17 18:26:55] 2025-10-18 01:26:10,474 | INFO     | --- collectZombieJob: --- 10, [736336]
[2025-10-17 18:26:55] 2025-10-18 01:26:10,474 | INFO     | zombie collector waiting for pid 736336
[2025-10-17 18:26:55] 2025-10-18 01:26:10,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 18:26:55] 2025-10-18 01:26:10,474 | INFO     | collected zombie processes
[2025-10-17 18:26:55] 2025-10-18 01:26:10,474 | INFO     | will attempt to kill all subprocesses of pid=736336
[2025-10-17 18:26:55] 2025-10-18 01:26:10,771 | INFO     | process IDs to be killed: [736336] (in reverse order)
[2025-10-17 18:26:55] 2025-10-18 01:26:10,857 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 18:26:55] 2025-10-18 01:26:10,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 18:26:55] 2025-10-18 01:26:10,887 | INFO     | did not find any defunct processes belonging to 736336
[2025-10-17 18:26:55] 2025-10-18 01:26:10,907 | INFO     | did not find any defunct processes belonging to 736336
[2025-10-17 18:26:55] 2025-10-18 01:26:10,908 | INFO     | ready for new job
[2025-10-17 18:26:55] 2025-10-18 01:26:10,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 18:26:55] 2025-10-18 01:26:10,921 | INFO     | ***************************************
[2025-10-17 18:26:55] 2025-10-18 01:26:10,921 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 18:26:55] 2025-10-18 01:26:10,921 | INFO     | ***************************************
[2025-10-17 18:26:55] 2025-10-18 01:26:10,921 | INFO     | 
[2025-10-17 18:26:55] 2025-10-18 01:26:10,923 | INFO     | architecture information:
[2025-10-17 18:26:55] 2025-10-18 01:26:10,924 | INFO     | executing command: cat /etc/os-release
[2025-10-17 18:26:55] 2025-10-18 01:26:10,972 | INFO     | cat /etc/os-release:
[2025-10-17 18:26:55] NAME="CentOS Linux"
[2025-10-17 18:26:55] VERSION="7 (Core)"
[2025-10-17 18:26:55] ID="centos"
[2025-10-17 18:26:55] ID_LIKE="rhel fedora"
[2025-10-17 18:26:55] VERSION_ID="7"
[2025-10-17 18:26:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 18:26:55] ANSI_COLOR="0;31"
[2025-10-17 18:26:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 18:26:55] HOME_URL="https://www.centos.org/"
[2025-10-17 18:26:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 18:26:55] 
[2025-10-17 18:26:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 18:26:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 18:26:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 18:26:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 18:26:55] 
[2025-10-17 18:26:55] 2025-10-18 01:26:10,972 | INFO     | ***************************************
[2025-10-17 18:26:55] 2025-10-18 01:26:11,476 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-17 18:26:55] 2025-10-18 01:26:11,519 | INFO     | sufficient remaining disk space (1954628501504 B)
[2025-10-17 18:26:55] 2025-10-18 01:26:11,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 18:26:55] 2025-10-18 01:26:11,519 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 18:26:55] 2025-10-18 01:26:11,519 | INFO     | update_server=False
[2025-10-17 18:26:55] 2025-10-18 01:26:11,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 18:26:55] 2025-10-18 01:26:11,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 18:26:55] 2025-10-18 01:26:11,520 | INFO     | aborting loop
[2025-10-17 18:26:55] 2025-10-18 01:26:11,661 | INFO     | all data control threads have been joined
[2025-10-17 18:26:55] 2025-10-18 01:26:12,033 | INFO     | all payload control threads have been joined
[2025-10-17 18:26:55] 2025-10-18 01:26:12,422 | INFO     | all job control threads have been joined
[2025-10-17 18:26:55] 2025-10-18 01:26:12,524 | INFO     | [job] retrieve thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:12,526 | INFO     | [job] job monitor thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:12,668 | INFO     | [data] control thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:12,676 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:12,681 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:12,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 18:26:55] 2025-10-18 01:26:12,882 | INFO     | [data] copytool_in thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:12,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 18:26:55] 2025-10-18 01:26:13,039 | INFO     | [payload] control thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:13,125 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:13,272 | INFO     | [payload] validate_post thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:13,272 | INFO     | [payload] failed_post thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:13,375 | INFO     | [job] validate thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:13,427 | INFO     | [job] control thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:13,894 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:14,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 18:26:55] 2025-10-18 01:26:14,720 | INFO     | [data] copytool_out thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:15,386 | INFO     | [job] queue monitor thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:16,931 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 18:26:55] 2025-10-18 01:26:41,020 | INFO     | PID=729166 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-17 18:26:55] 2025-10-18 01:26:41,020 | INFO     | .. there are 48 such processes running
[2025-10-17 18:26:55] 2025-10-18 01:26:41,020 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 18:26:55] 2025-10-18 01:26:41,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 18:26:55] 2025-10-18 01:26:41,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 18:26:55] 2025-10-18 01:26:48,627 | INFO     | [monitor] cgroup control has ended
[2025-10-17 18:26:55] 2025-10-18 01:26:49,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559947585344)>', '<ExcThread(monitor, started 140559557576448)>']
[2025-10-17 18:26:55] 2025-10-18 01:26:50,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 18:26:55] 2025-10-18 01:26:50,074 | INFO     | [monitor] control thread has ended
[2025-10-17 18:26:55] 2025-10-18 01:26:54,860 | INFO     | all workflow threads have been joined
[2025-10-17 18:26:55] 2025-10-18 01:26:54,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 18:26:55] 2025-10-18 01:26:54,860 | INFO     | traces error code: 0
[2025-10-17 18:26:55] 2025-10-18 01:26:54,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 18:26:55] 2025-10-18 01:26:55,153 [wrapper] ==== pilot stdout END ====
[2025-10-17 18:26:55] 2025-10-18 01:26:55,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 18:26:55] 2025-10-18 01:26:55,156 [wrapper] pilotpid: 729166
[2025-10-17 18:26:55] 2025-10-18 01:26:55,158 [wrapper] Pilot exit status: 0
[2025-10-17 18:26:55] 2025-10-18 01:26:55,235 [wrapper] pandaids: 6848015329
[2025-10-17 18:26:55] 2025-10-18 01:26:55,378 [wrapper] cleanup supervisor_pilot  729172 729167
[2025-10-17 18:26:55] 2025-10-18 01:26:55,380 [wrapper] Test setup, not cleaning
[2025-10-17 18:26:55] 2025-10-18 01:26:55,382 [wrapper] apfmon messages muted
[2025-10-17 18:26:55] 2025-10-18 01:26:55,383 [wrapper] ==== wrapper stdout END ====
[2025-10-17 18:26:55] 2025-10-18 01:26:55,385 [wrapper] ==== wrapper stderr END ====
[2025-10-17 18:26:55]  *** Error codes and diagnostics ***
[2025-10-17 18:26:55]     "exeErrorCode": 65,
[2025-10-17 18:26:55]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-17 18:26:55]     "pilotErrorCode": 1305,
[2025-10-17 18:26:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-17 18:26:55]  *** Listing of results directory ***
[2025-10-17 18:26:55] total 230100
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc    557409 Oct 17 16:11 pilot3.tar.gz
[2025-10-17 18:26:55] -rwx------. 1 boinc boinc     36292 Oct 17 16:16 runpilot2-wrapper.sh
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc      5112 Oct 17 16:16 queuedata.json
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc       100 Oct 17 18:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 18:26:55] -rwxr-xr-x. 1 boinc boinc      7986 Oct 17 18:20 run_atlas
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc       105 Oct 17 18:20 job.xml
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc      6593 Oct 17 18:20 init_data.xml
[2025-10-17 18:26:55] -rw-r--r--. 2 boinc boinc 231479954 Oct 17 18:20 EVNT.46771634._001482.pool.root.1
[2025-10-17 18:26:55] -rw-r--r--. 2 boinc boinc     15120 Oct 17 18:20 start_atlas.sh
[2025-10-17 18:26:55] drwxrwx--x. 2 boinc boinc      4096 Oct 17 18:20 shared
[2025-10-17 18:26:55] -rw-r--r--. 2 boinc boinc    569673 Oct 17 18:20 input.tar.gz
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc         0 Oct 17 18:20 boinc_lockfile
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc      2557 Oct 17 18:20 pandaJob.out
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc    976749 Oct 17 18:20 agis_schedconf.cvmfs.json
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc   1560740 Oct 17 18:20 agis_ddmendpoints.agis.ALL.json
[2025-10-17 18:26:55] drwx------. 5 boinc boinc      4096 Oct 17 18:20 pilot3
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc       952 Oct 17 18:23 memory_monitor_summary.json
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc     22695 Oct 17 18:23 log.46771637._033570.job.log.tgz.1
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc        95 Oct 17 18:25 pilot_heartbeat.json
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc      8395 Oct 17 18:26 heartbeat.json
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc       524 Oct 17 18:26 boinc_task_state.xml
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc      4822 Oct 17 18:26 pilotlog.txt
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc     97239 Oct 17 18:26 log.46771637._033570.job.log.1
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc       188 Oct 17 18:26 output.list
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc       620 Oct 17 18:26 runtime_log
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc    143360 Oct 17 18:26 result.tar.gz
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc       646 Oct 17 18:26 RzbKDmar8T8n9Rq4apOajLDm4fhM0noT9bVof3QYDmS1aMDmSV1W1m.diag
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc      8528 Oct 17 18:26 runtime_log.err
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc        23 Oct 17 18:26 wrapper_checkpoint.txt
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc      8192 Oct 17 18:26 boinc_mmap_file
[2025-10-17 18:26:55] -rw-r--r--. 1 boinc boinc     21805 Oct 17 18:26 stderr.txt
[2025-10-17 18:26:55] No HITS result produced
[2025-10-17 18:26:55]  *** Contents of shared directory: ***
[2025-10-17 18:26:55] total 226772
[2025-10-17 18:26:55] -rw-r--r--. 2 boinc boinc 231479954 Oct 17 18:20 ATLAS.root_0
[2025-10-17 18:26:55] -rw-r--r--. 2 boinc boinc     15120 Oct 17 18:20 start_atlas.sh
[2025-10-17 18:26:55] -rw-r--r--. 2 boinc boinc    569673 Oct 17 18:20 input.tar.gz
[2025-10-17 18:26:55] -rw-------. 1 boinc boinc    143360 Oct 17 18:26 result.tar.gz
18:26:57 (725129): run_atlas exited; CPU time 33.180213
18:26:57 (725129): called boinc_finish(0)

</stderr_txt>
]]>

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