Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:31:22 (3872): wrapper (7.7.26015): starting
02:31:22 (3872): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 02:31:22] Arguments: --nthreads 4
[2025-10-18 02:31:22] Threads: 4
[2025-10-18 02:31:22] Checking for CVMFS
[2025-10-18 02:31:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 02:32:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 02:32:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 02:32:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 02:32:26] 2.12.7.0 4097 1 25432 151834 3 1 3581553 4194305 0 130560 0 0 0.000 1291 1328 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-18 02:32:26] CVMFS is ok
[2025-10-18 02:32:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 02:32:26] Checking for apptainer binary...
[2025-10-18 02:32:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 02:32:26] Running /usr/bin/apptainer --version
[2025-10-18 02:32:27] apptainer version 1.0.3
[2025-10-18 02:32:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 02:32:28] TeeC03
[2025-10-18 02:32:28] apptainer works
[2025-10-18 02:32:28] Set ATHENA_PROC_NUMBER=4
[2025-10-18 02:32:28] Set ATHENA_CORE_NUMBER=4
[2025-10-18 02:32:28] Starting ATLAS job with PandaID=6848005296
[2025-10-18 02:32:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 05:36:31]  *** The last 200 lines of the pilot log: ***
[2025-10-18 05:36:31] 2025-10-18 04:35:30,371 | INFO     | time since job start (10943s) is within the limit (172800.0s)
[2025-10-18 05:36:31] 2025-10-18 04:35:32,126 | INFO     | monitor loop #861: job 0:6848005296 is in state 'finished'
[2025-10-18 05:36:31] 2025-10-18 04:35:32,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:36:31] 2025-10-18 04:35:32,374 | INFO     | time since job start (10945s) is within the limit (172800.0s)
[2025-10-18 05:36:31] 2025-10-18 04:35:33,740 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-18 05:36:31] 2025-10-18 04:35:33,740 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3200.0015
[2025-10-18 05:36:31] 2025-10-18 04:35:33,741 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6848005296/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 05:36:31] 2025-10-18 04:35:33,741 | INFO     | extracted standard info from prmon json
[2025-10-18 05:36:31] 2025-10-18 04:35:33,741 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 05:36:31] 2025-10-18 04:35:33,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 05:36:31] 2025-10-18 04:35:33,742 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 05:36:31] 2025-10-18 04:35:33,742 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 05:36:31] 2025-10-18 04:35:33,743 | INFO     | fitting pss+swap vs Time
[2025-10-18 05:36:31] 2025-10-18 04:35:33,743 | INFO     | sum of square deviations: 1719429448.0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,744 | INFO     | sum of deviations: -30827032712.000004
[2025-10-18 05:36:31] 2025-10-18 04:35:33,744 | INFO     | mean x: 1760756577.0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,744 | INFO     | mean y: 2417331.0790960453
[2025-10-18 05:36:31] 2025-10-18 04:35:33,744 | INFO     | -- intersect: 31570389288.395576
[2025-10-18 05:36:31] 2025-10-18 04:35:33,744 | INFO     | intersect: 31570389288.395576
[2025-10-18 05:36:31] 2025-10-18 04:35:33,744 | INFO     | chi2: 1.729390186407601
[2025-10-18 05:36:31] 2025-10-18 04:35:33,744 | INFO     | sum of square deviations: 1577789583.0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,745 | INFO     | sum of deviations: -29533857325.499996
[2025-10-18 05:36:31] 2025-10-18 04:35:33,745 | INFO     | mean x: 1760756424.5
[2025-10-18 05:36:31] 2025-10-18 04:35:33,745 | INFO     | mean y: 2418723.7965116277
[2025-10-18 05:36:31] 2025-10-18 04:35:33,745 | INFO     | -- intersect: 32961141221.675056
[2025-10-18 05:36:31] 2025-10-18 04:35:33,745 | INFO     | intersect: 32961141221.675056
[2025-10-18 05:36:31] 2025-10-18 04:35:33,745 | INFO     | chi2: 1.723947725378055
[2025-10-18 05:36:31] 2025-10-18 04:35:33,745 | INFO     | current chi2=1.723947725378055 (change=0.3147040541990842 %)
[2025-10-18 05:36:31] 2025-10-18 04:35:33,745 | INFO     | right removable region: 171
[2025-10-18 05:36:31] 2025-10-18 04:35:33,745 | INFO     | sum of square deviations: 1577789583.0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,746 | INFO     | sum of deviations: -50092905400.49999
[2025-10-18 05:36:31] 2025-10-18 04:35:33,746 | INFO     | mean x: 1760756729.5
[2025-10-18 05:36:31] 2025-10-18 04:35:33,746 | INFO     | mean y: 2437637.354651163
[2025-10-18 05:36:31] 2025-10-18 04:35:33,746 | INFO     | -- intersect: 55904327999.96662
[2025-10-18 05:36:31] 2025-10-18 04:35:33,746 | INFO     | intersect: 55904327999.96662
[2025-10-18 05:36:31] 2025-10-18 04:35:33,746 | INFO     | chi2: 0.3603141160220491
[2025-10-18 05:36:31] 2025-10-18 04:35:33,746 | INFO     | current chi2=0.3603141160220491 (change=79.16525033772069 %)
[2025-10-18 05:36:31] 2025-10-18 04:35:33,746 | INFO     | sum of square deviations: 1444149868.0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,747 | INFO     | sum of deviations: -42224959388.99999
[2025-10-18 05:36:31] 2025-10-18 04:35:33,747 | INFO     | mean x: 1760756882.0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,747 | INFO     | mean y: 2428652.005988024
[2025-10-18 05:36:31] 2025-10-18 04:35:33,747 | INFO     | -- intersect: 51484542443.50359
[2025-10-18 05:36:31] 2025-10-18 04:35:33,747 | INFO     | intersect: 51484542443.50359
[2025-10-18 05:36:31] 2025-10-18 04:35:33,747 | INFO     | chi2: 0.34505780150048937
[2025-10-18 05:36:31] 2025-10-18 04:35:33,747 | INFO     | current chi2=0.34505780150048937 (change=4.234170642547387 %)
[2025-10-18 05:36:31] 2025-10-18 04:35:33,747 | INFO     | left removable region: 20
[2025-10-18 05:36:31] 2025-10-18 04:35:33,747 | INFO     | sum of square deviations: 1067554900.0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,748 | INFO     | sum of deviations: -23753852925.0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,748 | INFO     | mean x: 1760757004.0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,748 | INFO     | mean y: 2408375.536423841
[2025-10-18 05:36:31] 2025-10-18 04:35:33,748 | INFO     | -- intersect: 39180499272.481995
[2025-10-18 05:36:31] 2025-10-18 04:35:33,748 | INFO     | intersect: 39180499272.481995
[2025-10-18 05:36:31] 2025-10-18 04:35:33,748 | INFO     | chi2: 0.2651036338687577
[2025-10-18 05:36:31] 2025-10-18 04:35:33,748 | INFO     | -- intersect: 39180499272.481995
[2025-10-18 05:36:31] 2025-10-18 04:35:33,748 | INFO     | current memory leak: -22.25 B/s (using 151 data points, chi2=0.27)
[2025-10-18 05:36:31] 2025-10-18 04:35:33,748 | INFO     | could have reported an average CPU frequency of 3199 MHz (9 samples)
[2025-10-18 05:36:31] 2025-10-18 04:35:33,749 | INFO     | ..............................
[2025-10-18 05:36:31] 2025-10-18 04:35:33,749 | INFO     | . Timing measurements:
[2025-10-18 05:36:31] 2025-10-18 04:35:33,749 | INFO     | . get job = 0 s
[2025-10-18 05:36:31] 2025-10-18 04:35:33,749 | INFO     | . initial setup = 4 s
[2025-10-18 05:36:31] 2025-10-18 04:35:33,749 | INFO     | . payload setup = 5 s
[2025-10-18 05:36:31] 2025-10-18 04:35:33,749 | INFO     | . stage-in = 0 s
[2025-10-18 05:36:31] 2025-10-18 04:35:33,749 | INFO     | . payload execution = 10799 s
[2025-10-18 05:36:31] 2025-10-18 04:35:33,749 | INFO     | . stage-out = 73 s
[2025-10-18 05:36:31] 2025-10-18 04:35:33,749 | INFO     | . log creation = 0 s
[2025-10-18 05:36:31] 2025-10-18 04:35:33,749 | INFO     | ..............................
[2025-10-18 05:36:31] 2025-10-18 04:35:33,791 | INFO     | 
[2025-10-18 05:36:31] 2025-10-18 04:35:33,791 | INFO     | job summary report
[2025-10-18 05:36:31] 2025-10-18 04:35:33,791 | INFO     | --------------------------------------------------
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | PanDA job id: 6848005296
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | task id: 46771637
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | errors: (none)
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | pilot state: finished 
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | transexitcode: 0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | exeerrorcode: 0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | exeerrordiag: 
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | exitcode: 0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | exitmsg: OK
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | cpuconsumptiontime: 41970 s
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | nevents: 400
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | neventsw: 0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | pid: 14554
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | pgrp: 14554
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | corecount: 4
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | event service: False
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | sizes: {0: 2348928, 2: 2349190, 11: 2349218, 10808: 2378244, 10809: 2378243, 10883: 2387295, 10885: 2387479, 10933: 2387737}
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | --------------------------------------------------
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | 
[2025-10-18 05:36:31] 2025-10-18 04:35:33,792 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-18 05:36:31] 2025-10-18 04:35:33,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,803 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 05:36:31] 2025-10-18 04:35:33,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,803 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 05:36:31] 2025-10-18 04:35:33,803 | INFO     | job 6848005296 has completed (purged errors)
[2025-10-18 05:36:31] 2025-10-18 04:35:33,803 | INFO     | overall cleanup function is called
[2025-10-18 05:36:31] 2025-10-18 04:35:34,810 | INFO     | --- collectZombieJob: --- 10, [14554]
[2025-10-18 05:36:31] 2025-10-18 04:35:34,811 | INFO     | zombie collector waiting for pid 14554
[2025-10-18 05:36:31] 2025-10-18 04:35:34,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 05:36:31] 2025-10-18 04:35:34,811 | INFO     | collected zombie processes
[2025-10-18 05:36:31] 2025-10-18 04:35:34,812 | INFO     | will attempt to kill all subprocesses of pid=14554
[2025-10-18 05:36:31] 2025-10-18 04:35:34,871 | INFO     | process IDs to be killed: [14554] (in reverse order)
[2025-10-18 05:36:31] 2025-10-18 04:35:34,900 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 05:36:31] 2025-10-18 04:35:34,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 05:36:31] 2025-10-18 04:35:34,901 | INFO     | did not find any defunct processes belonging to 14554
[2025-10-18 05:36:31] 2025-10-18 04:35:34,903 | INFO     | did not find any defunct processes belonging to 14554
[2025-10-18 05:36:31] 2025-10-18 04:35:34,903 | INFO     | ready for new job
[2025-10-18 05:36:31] 2025-10-18 04:35:34,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 05:36:31] 2025-10-18 04:35:34,904 | INFO     | ***************************************
[2025-10-18 05:36:31] 2025-10-18 04:35:34,904 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 05:36:31] 2025-10-18 04:35:34,904 | INFO     | ***************************************
[2025-10-18 05:36:31] 2025-10-18 04:35:34,904 | INFO     | 
[2025-10-18 05:36:31] 2025-10-18 04:35:34,923 | INFO     | architecture information:
[2025-10-18 05:36:31] 2025-10-18 04:35:34,923 | INFO     | executing command: cat /etc/os-release
[2025-10-18 05:36:31] 2025-10-18 04:35:34,931 | INFO     | cat /etc/os-release:
[2025-10-18 05:36:31] NAME="CentOS Linux"
[2025-10-18 05:36:31] VERSION="7 (Core)"
[2025-10-18 05:36:31] ID="centos"
[2025-10-18 05:36:31] ID_LIKE="rhel fedora"
[2025-10-18 05:36:31] VERSION_ID="7"
[2025-10-18 05:36:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 05:36:31] ANSI_COLOR="0;31"
[2025-10-18 05:36:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 05:36:31] HOME_URL="https://www.centos.org/"
[2025-10-18 05:36:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 05:36:31] 
[2025-10-18 05:36:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 05:36:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 05:36:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 05:36:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 05:36:31] 
[2025-10-18 05:36:31] 2025-10-18 04:35:34,931 | INFO     | ***************************************
[2025-10-18 05:36:31] 2025-10-18 04:35:35,435 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-18 05:36:31] 2025-10-18 04:35:35,446 | INFO     | sufficient remaining disk space (430813741056 B)
[2025-10-18 05:36:31] 2025-10-18 04:35:35,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 05:36:31] 2025-10-18 04:35:35,447 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 05:36:31] 2025-10-18 04:35:35,447 | INFO     | update_server=False
[2025-10-18 05:36:31] 2025-10-18 04:35:35,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 05:36:31] 2025-10-18 04:35:35,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:36:31] 2025-10-18 04:35:35,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:36:31] 2025-10-18 04:35:35,636 | INFO     | aborting loop
[2025-10-18 05:36:31] 2025-10-18 04:35:36,050 | INFO     | all job control threads have been joined
[2025-10-18 05:36:31] 2025-10-18 04:35:36,109 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 05:36:31] 2025-10-18 04:35:36,275 | INFO     | all data control threads have been joined
[2025-10-18 05:36:31] 2025-10-18 04:35:36,453 | INFO     | [job] queue monitor thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:36,453 | INFO     | [job] retrieve thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:36,642 | INFO     | [job] job monitor thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:36,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 05:36:31] 2025-10-18 04:35:36,736 | INFO     | all payload control threads have been joined
[2025-10-18 05:36:31] 2025-10-18 04:35:36,849 | INFO     | [payload] validate_post thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:36,943 | INFO     | [data] copytool_in thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:37,056 | INFO     | [job] control thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:37,281 | INFO     | [data] control thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:37,320 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:37,504 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:37,516 | INFO     | [job] validate thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:37,565 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:37,588 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:37,737 | INFO     | [payload] failed_post thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:37,738 | INFO     | [payload] control thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:38,735 | INFO     | [data] copytool_out thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:35:40,116 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 05:36:31] 2025-10-18 04:36:05,484 | INFO     | PID=8189 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 05:36:31] 2025-10-18 04:36:05,484 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 05:36:31] 2025-10-18 04:36:05,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 05:36:31] 2025-10-18 04:36:05,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 05:36:31] 2025-10-18 04:36:24,700 | INFO     | [monitor] cgroup control has ended
[2025-10-18 05:36:31] 2025-10-18 04:36:26,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672138164032)>', '<ExcThread(monitor, started 139671698913024)>']
[2025-10-18 05:36:31] 2025-10-18 04:36:27,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 05:36:31] 2025-10-18 04:36:27,596 | INFO     | [monitor] control thread has ended
[2025-10-18 05:36:31] 2025-10-18 04:36:31,710 | INFO     | all workflow threads have been joined
[2025-10-18 05:36:31] 2025-10-18 04:36:31,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 05:36:31] 2025-10-18 04:36:31,711 | INFO     | traces error code: 0
[2025-10-18 05:36:31] 2025-10-18 04:36:31,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 05:36:31] 2025-10-18 04:36:31,800 [wrapper] ==== pilot stdout END ====
[2025-10-18 05:36:31] 2025-10-18 04:36:31,802 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 05:36:31] 2025-10-18 04:36:31,804 [wrapper] pilotpid: 8189
[2025-10-18 05:36:31] 2025-10-18 04:36:31,806 [wrapper] Pilot exit status: 0
[2025-10-18 05:36:31] 2025-10-18 04:36:31,831 [wrapper] pandaids: 6848005296
[2025-10-18 05:36:31] 2025-10-18 04:36:31,847 [wrapper] cleanup supervisor_pilot   33862 8190
[2025-10-18 05:36:31] 2025-10-18 04:36:31,849 [wrapper] Test setup, not cleaning
[2025-10-18 05:36:31] 2025-10-18 04:36:31,851 [wrapper] apfmon messages muted
[2025-10-18 05:36:31] 2025-10-18 04:36:31,853 [wrapper] ==== wrapper stdout END ====
[2025-10-18 05:36:31] 2025-10-18 04:36:31,855 [wrapper] ==== wrapper stderr END ====
[2025-10-18 05:36:31]  *** Error codes and diagnostics ***
[2025-10-18 05:36:31]     "exeErrorCode": 0,
[2025-10-18 05:36:31]     "exeErrorDiag": "",
[2025-10-18 05:36:31]     "pilotErrorCode": 0,
[2025-10-18 05:36:31]     "pilotErrorDiag": "",
[2025-10-18 05:36:31]  *** Listing of results directory ***
[2025-10-18 05:36:31] total 431976
[2025-10-18 05:36:31] -rw-r--r-- 1 m m    557409 Oct 17 20:16 pilot3.tar.gz
[2025-10-18 05:36:31] -rw-r--r-- 1 m m      5112 Oct 17 20:45 queuedata.json
[2025-10-18 05:36:31] -rwx------ 1 m m     36292 Oct 17 20:46 runpilot2-wrapper.sh
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m       100 Oct 18 02:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 05:36:31] -rwxr-xr-x 1 m m      7986 Oct 18 02:31 run_atlas
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m       105 Oct 18 02:31 job.xml
[2025-10-18 05:36:31] -rw-r--r-- 2 m m     15120 Oct 18 02:31 start_atlas.sh
[2025-10-18 05:36:31] drwxrwx--x 2 m m      4096 Oct 18 02:31 shared
[2025-10-18 05:36:31] -rw-r--r-- 2 m m    569677 Oct 18 02:31 input.tar.gz
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m      5963 Oct 18 02:31 init_data.xml
[2025-10-18 05:36:31] -rw-r--r-- 2 m m 228187234 Oct 18 02:31 EVNT.46771634._001363.pool.root.1
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m         0 Oct 18 02:31 boinc_lockfile
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m      2558 Oct 18 02:32 pandaJob.out
[2025-10-18 05:36:31] -rw------- 1 m m    976749 Oct 18 02:33 agis_schedconf.cvmfs.json
[2025-10-18 05:36:31] drwx------ 5 m m      4096 Oct 18 02:33 pilot3
[2025-10-18 05:36:31] -rw------- 1 m m 206455925 Oct 18 05:33 HITS.46771637._030525.pool.root.1
[2025-10-18 05:36:31] -rw------- 1 m m      1014 Oct 18 05:33 memory_monitor_summary.json
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m       530 Oct 18 05:33 boinc_task_state.xml
[2025-10-18 05:36:31] -rw------- 1 m m   1560740 Oct 18 05:34 agis_ddmendpoints.agis.ALL.json
[2025-10-18 05:36:31] -rw------- 1 m m    359394 Oct 18 05:34 log.46771637._030525.job.log.tgz.1
[2025-10-18 05:36:31] -rw------- 1 m m        95 Oct 18 05:35 pilot_heartbeat.json
[2025-10-18 05:36:31] -rw------- 1 m m      7758 Oct 18 05:35 heartbeat.json
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m      8192 Oct 18 05:36 boinc_mmap_file
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m        28 Oct 18 05:36 wrapper_checkpoint.txt
[2025-10-18 05:36:31] -rw------- 1 m m      4745 Oct 18 05:36 pilotlog.txt
[2025-10-18 05:36:31] -rw------- 1 m m   1537678 Oct 18 05:36 log.46771637._030525.job.log.1
[2025-10-18 05:36:31] -rw------- 1 m m       357 Oct 18 05:36 output.list
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m       620 Oct 18 05:36 runtime_log
[2025-10-18 05:36:31] -rw------- 1 m m   1914880 Oct 18 05:36 result.tar.gz
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m      8618 Oct 18 05:36 runtime_log.err
[2025-10-18 05:36:31] -rw------- 1 m m       639 Oct 18 05:36 RtELDmzZ5T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9guNDmweDQTo.diag
[2025-10-18 05:36:31] -rw-rw-r-- 1 m m     20783 Oct 18 05:36 stderr.txt
[2025-10-18 05:36:31] HITS file was successfully produced:
[2025-10-18 05:36:31] -rw------- 1 m m 206455925 Oct 18 05:33 shared/HITS.pool.root.1
[2025-10-18 05:36:31]  *** Contents of shared directory: ***
[2025-10-18 05:36:31] total 426916
[2025-10-18 05:36:31] -rw-r--r-- 2 m m     15120 Oct 18 02:31 start_atlas.sh
[2025-10-18 05:36:31] -rw-r--r-- 2 m m    569677 Oct 18 02:31 input.tar.gz
[2025-10-18 05:36:31] -rw-r--r-- 2 m m 228187234 Oct 18 02:31 ATLAS.root_0
[2025-10-18 05:36:31] -rw------- 1 m m 206455925 Oct 18 05:33 HITS.pool.root.1
[2025-10-18 05:36:31] -rw------- 1 m m   1914880 Oct 18 05:36 result.tar.gz
05:36:33 (3872): run_atlas exited; CPU time 42070.680077
05:36:33 (3872): called boinc_finish(0)

</stderr_txt>
]]>

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