Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:25:01 (3574): wrapper (7.7.26015): starting
02:25:01 (3574): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 02:25:01] Arguments: --nthreads 4
[2025-10-18 02:25:01] Threads: 4
[2025-10-18 02:25:01] Checking for CVMFS
[2025-10-18 02:25:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 02:25:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 02:25:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 02:25:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 02:25:12] 2.12.7.0 3796 0 25036 151834 3 1 3236587 4194305 0 130560 0 0 0.000 1291 434 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-18 02:25:12] CVMFS is ok
[2025-10-18 02:25:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 02:25:12] Checking for apptainer binary...
[2025-10-18 02:25:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 02:25:12] Running /usr/bin/apptainer --version
[2025-10-18 02:25:13] apptainer version 1.0.3
[2025-10-18 02:25:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 02:25:14] TeeC05
[2025-10-18 02:25:14] apptainer works
[2025-10-18 02:25:14] Set ATHENA_PROC_NUMBER=4
[2025-10-18 02:25:14] Set ATHENA_CORE_NUMBER=4
[2025-10-18 02:25:14] Starting ATLAS job with PandaID=6848007236
[2025-10-18 02:25:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 05:29:10]  *** The last 200 lines of the pilot log: ***
[2025-10-18 05:29:10] 2025-10-18 04:28:02,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:29:10] 2025-10-18 04:28:02,634 | INFO     | PID=7871 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 05:29:10] 2025-10-18 04:28:02,743 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-18 05:29:10] 2025-10-18 04:28:02,744 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3199.99975
[2025-10-18 05:29:10] 2025-10-18 04:28:02,745 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6848007236/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 05:29:10] 2025-10-18 04:28:02,745 | INFO     | extracted standard info from prmon json
[2025-10-18 05:29:10] 2025-10-18 04:28:02,745 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 05:29:10] 2025-10-18 04:28:02,745 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 05:29:10] 2025-10-18 04:28:02,745 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 05:29:10] 2025-10-18 04:28:02,745 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 05:29:10] 2025-10-18 04:28:02,747 | INFO     | fitting pss+swap vs Time
[2025-10-18 05:29:10] 2025-10-18 04:28:02,747 | INFO     | sum of square deviations: 1748737904.5
[2025-10-18 05:29:10] 2025-10-18 04:28:02,748 | INFO     | sum of deviations: -32225024886.500004
[2025-10-18 05:29:10] 2025-10-18 04:28:02,748 | INFO     | mean x: 1760756167.5
[2025-10-18 05:29:10] 2025-10-18 04:28:02,748 | INFO     | mean y: 2424841.5224719103
[2025-10-18 05:29:10] 2025-10-18 04:28:02,748 | INFO     | -- intersect: 32448917349.483017
[2025-10-18 05:29:10] 2025-10-18 04:28:02,748 | INFO     | intersect: 32448917349.483017
[2025-10-18 05:29:10] 2025-10-18 04:28:02,748 | INFO     | chi2: 1.933468547130779
[2025-10-18 05:29:10] 2025-10-18 04:28:02,748 | INFO     | sum of square deviations: 1605470102.0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,749 | INFO     | sum of deviations: -30766563961.000004
[2025-10-18 05:29:10] 2025-10-18 04:28:02,749 | INFO     | mean x: 1760756015.0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,749 | INFO     | mean y: 2426394.329479769
[2025-10-18 05:29:10] 2025-10-18 04:28:02,749 | INFO     | -- intersect: 33744825264.123554
[2025-10-18 05:29:10] 2025-10-18 04:28:02,749 | INFO     | intersect: 33744825264.123554
[2025-10-18 05:29:10] 2025-10-18 04:28:02,749 | INFO     | chi2: 1.9280857396823068
[2025-10-18 05:29:10] 2025-10-18 04:28:02,749 | INFO     | current chi2=1.9280857396823068 (change=0.2784016040219667 %)
[2025-10-18 05:29:10] 2025-10-18 04:28:02,749 | INFO     | right removable region: 172
[2025-10-18 05:29:10] 2025-10-18 04:28:02,749 | INFO     | sum of square deviations: 1605470102.0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,750 | INFO     | sum of deviations: -57459504124.0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,750 | INFO     | mean x: 1760756320.0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,750 | INFO     | mean y: 2451302.5375722544
[2025-10-18 05:29:10] 2025-10-18 04:28:02,750 | INFO     | -- intersect: 63019622973.54205
[2025-10-18 05:29:10] 2025-10-18 04:28:02,750 | INFO     | intersect: 63019622973.54205
[2025-10-18 05:29:10] 2025-10-18 04:28:02,750 | INFO     | chi2: 0.35799755129885047
[2025-10-18 05:29:10] 2025-10-18 04:28:02,750 | INFO     | current chi2=0.35799755129885047 (change=81.48418024021595 %)
[2025-10-18 05:29:10] 2025-10-18 04:28:02,750 | INFO     | sum of square deviations: 1470248962.0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,751 | INFO     | sum of deviations: -50009428943.99999
[2025-10-18 05:29:10] 2025-10-18 04:28:02,751 | INFO     | mean x: 1760756472.5
[2025-10-18 05:29:10] 2025-10-18 04:28:02,751 | INFO     | mean y: 2442891.1904761903
[2025-10-18 05:29:10] 2025-10-18 04:28:02,751 | INFO     | -- intersect: 59893269530.09874
[2025-10-18 05:29:10] 2025-10-18 04:28:02,751 | INFO     | intersect: 59893269530.09874
[2025-10-18 05:29:10] 2025-10-18 04:28:02,751 | INFO     | chi2: 0.3498948567159408
[2025-10-18 05:29:10] 2025-10-18 04:28:02,751 | INFO     | current chi2=0.3498948567159408 (change=2.2633379903053275 %)
[2025-10-18 05:29:10] 2025-10-18 04:28:02,751 | INFO     | left removable region: 20
[2025-10-18 05:29:10] 2025-10-18 04:28:02,751 | INFO     | sum of square deviations: 1088905998.0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | sum of deviations: -31958980554.0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | mean x: 1760756594.5
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | mean y: 2424437.4736842103
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | -- intersect: 51679966729.74487
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | intersect: 51679966729.74487
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | chi2: 0.29629201365847996
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | -- intersect: 51679966729.74487
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | current memory leak: -29.35 B/s (using 152 data points, chi2=0.30)
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | could have reported an average CPU frequency of 3068 MHz (10 samples)
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | ..............................
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | . Timing measurements:
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | . get job = 0 s
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | . initial setup = 12 s
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | . payload setup = 6 s
[2025-10-18 05:29:10] 2025-10-18 04:28:02,752 | INFO     | . stage-in = 0 s
[2025-10-18 05:29:10] 2025-10-18 04:28:02,753 | INFO     | . payload execution = 10830 s
[2025-10-18 05:29:10] 2025-10-18 04:28:02,753 | INFO     | . stage-out = 80 s
[2025-10-18 05:29:10] 2025-10-18 04:28:02,753 | INFO     | . log creation = 0 s
[2025-10-18 05:29:10] 2025-10-18 04:28:02,753 | INFO     | ..............................
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | 
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | job summary report
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | --------------------------------------------------
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | PanDA job id: 6848007236
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | task id: 46771637
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | errors: (none)
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | pilot state: finished 
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | transexitcode: 0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | exeerrorcode: 0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | exeerrordiag: 
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | exitcode: 0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | exitmsg: OK
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | cpuconsumptiontime: 41854 s
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | nevents: 400
[2025-10-18 05:29:10] 2025-10-18 04:28:02,795 | INFO     | neventsw: 0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,796 | INFO     | pid: 14238
[2025-10-18 05:29:10] 2025-10-18 04:28:02,796 | INFO     | pgrp: 14238
[2025-10-18 05:29:10] 2025-10-18 04:28:02,796 | INFO     | corecount: 4
[2025-10-18 05:29:10] 2025-10-18 04:28:02,796 | INFO     | event service: False
[2025-10-18 05:29:10] 2025-10-18 04:28:02,796 | INFO     | sizes: {0: 2348924, 1: 2348924, 3: 2349214, 11: 2349242, 10840: 2378265, 10921: 2387703, 10924: 2387671}
[2025-10-18 05:29:10] 2025-10-18 04:28:02,796 | INFO     | --------------------------------------------------
[2025-10-18 05:29:10] 2025-10-18 04:28:02,796 | INFO     | 
[2025-10-18 05:29:10] 2025-10-18 04:28:02,796 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-18 05:29:10] 2025-10-18 04:28:02,806 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,806 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,806 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,806 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,806 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,806 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,806 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,806 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,806 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,806 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | job 6848007236 has completed (purged errors)
[2025-10-18 05:29:10] 2025-10-18 04:28:02,807 | INFO     | overall cleanup function is called
[2025-10-18 05:29:10] 2025-10-18 04:28:03,814 | INFO     | --- collectZombieJob: --- 10, [14238]
[2025-10-18 05:29:10] 2025-10-18 04:28:03,814 | INFO     | zombie collector waiting for pid 14238
[2025-10-18 05:29:10] 2025-10-18 04:28:03,815 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 05:29:10] 2025-10-18 04:28:03,815 | INFO     | collected zombie processes
[2025-10-18 05:29:10] 2025-10-18 04:28:03,815 | INFO     | will attempt to kill all subprocesses of pid=14238
[2025-10-18 05:29:10] 2025-10-18 04:28:03,876 | INFO     | process IDs to be killed: [14238] (in reverse order)
[2025-10-18 05:29:10] 2025-10-18 04:28:03,904 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 05:29:10] 2025-10-18 04:28:03,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 05:29:10] 2025-10-18 04:28:03,906 | INFO     | did not find any defunct processes belonging to 14238
[2025-10-18 05:29:10] 2025-10-18 04:28:03,907 | INFO     | did not find any defunct processes belonging to 14238
[2025-10-18 05:29:10] 2025-10-18 04:28:03,907 | INFO     | ready for new job
[2025-10-18 05:29:10] 2025-10-18 04:28:03,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 05:29:10] 2025-10-18 04:28:03,909 | INFO     | ***************************************
[2025-10-18 05:29:10] 2025-10-18 04:28:03,909 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 05:29:10] 2025-10-18 04:28:03,909 | INFO     | ***************************************
[2025-10-18 05:29:10] 2025-10-18 04:28:03,909 | INFO     | 
[2025-10-18 05:29:10] 2025-10-18 04:28:03,927 | INFO     | architecture information:
[2025-10-18 05:29:10] 2025-10-18 04:28:03,928 | INFO     | executing command: cat /etc/os-release
[2025-10-18 05:29:10] 2025-10-18 04:28:03,935 | INFO     | cat /etc/os-release:
[2025-10-18 05:29:10] NAME="CentOS Linux"
[2025-10-18 05:29:10] VERSION="7 (Core)"
[2025-10-18 05:29:10] ID="centos"
[2025-10-18 05:29:10] ID_LIKE="rhel fedora"
[2025-10-18 05:29:10] VERSION_ID="7"
[2025-10-18 05:29:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 05:29:10] ANSI_COLOR="0;31"
[2025-10-18 05:29:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 05:29:10] HOME_URL="https://www.centos.org/"
[2025-10-18 05:29:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 05:29:10] 
[2025-10-18 05:29:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 05:29:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 05:29:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 05:29:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 05:29:10] 
[2025-10-18 05:29:10] 2025-10-18 04:28:03,936 | INFO     | ***************************************
[2025-10-18 05:29:10] 2025-10-18 04:28:04,439 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-18 05:29:10] 2025-10-18 04:28:04,451 | INFO     | sufficient remaining disk space (431906357248 B)
[2025-10-18 05:29:10] 2025-10-18 04:28:04,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 05:29:10] 2025-10-18 04:28:04,452 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 05:29:10] 2025-10-18 04:28:04,452 | INFO     | update_server=False
[2025-10-18 05:29:10] 2025-10-18 04:28:04,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 05:29:10] 2025-10-18 04:28:04,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:29:10] 2025-10-18 04:28:04,671 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 05:29:10] 2025-10-18 04:28:04,671 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 05:29:10] 2025-10-18 04:28:04,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:29:10] 2025-10-18 04:28:04,672 | INFO     | will abort loop
[2025-10-18 05:29:10] 2025-10-18 04:28:04,905 | INFO     | all payload control threads have been joined
[2025-10-18 05:29:10] 2025-10-18 04:28:05,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 05:29:10] 2025-10-18 04:28:05,458 | INFO     | [job] retrieve thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:05,459 | INFO     | [job] queue monitor thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:05,489 | INFO     | all data control threads have been joined
[2025-10-18 05:29:10] 2025-10-18 04:28:05,644 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:05,678 | INFO     | [job] job monitor thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:05,752 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:05,908 | INFO     | all job control threads have been joined
[2025-10-18 05:29:10] 2025-10-18 04:28:05,911 | INFO     | [payload] control thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:05,961 | INFO     | [payload] failed_post thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:05,988 | INFO     | [data] copytool_in thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:06,187 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 05:29:10] 2025-10-18 04:28:06,304 | INFO     | [job] validate thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:06,451 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:06,495 | INFO     | [data] control thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:06,513 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:06,617 | INFO     | [payload] validate_post thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:06,914 | INFO     | [job] control thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:07,411 | INFO     | [data] copytool_out thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:10,194 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 05:29:10] 2025-10-18 04:28:34,746 | INFO     | PID=7871 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 05:29:10] 2025-10-18 04:28:34,746 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 05:29:10] 2025-10-18 04:28:34,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 05:29:10] 2025-10-18 04:28:34,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 05:29:10] 2025-10-18 04:29:03,915 | INFO     | [monitor] cgroup control has ended
[2025-10-18 05:29:10] 2025-10-18 04:29:04,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578587387712)>', '<ExcThread(monitor, started 140578146731776)>']
[2025-10-18 05:29:10] 2025-10-18 04:29:05,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 05:29:10] 2025-10-18 04:29:05,911 | INFO     | [monitor] control thread has ended
[2025-10-18 05:29:10] 2025-10-18 04:29:09,982 | INFO     | all workflow threads have been joined
[2025-10-18 05:29:10] 2025-10-18 04:29:09,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 05:29:10] 2025-10-18 04:29:09,983 | INFO     | traces error code: 0
[2025-10-18 05:29:10] 2025-10-18 04:29:09,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 05:29:10] 2025-10-18 04:29:10,077 [wrapper] ==== pilot stdout END ====
[2025-10-18 05:29:10] 2025-10-18 04:29:10,079 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 05:29:10] 2025-10-18 04:29:10,081 [wrapper] pilotpid: 7871
[2025-10-18 05:29:10] 2025-10-18 04:29:10,083 [wrapper] Pilot exit status: 0
[2025-10-18 05:29:10] 2025-10-18 04:29:10,112 [wrapper] pandaids: 6848007236
[2025-10-18 05:29:10] 2025-10-18 04:29:10,131 [wrapper] cleanup supervisor_pilot   34312 7872
[2025-10-18 05:29:10] 2025-10-18 04:29:10,134 [wrapper] Test setup, not cleaning
[2025-10-18 05:29:10] 2025-10-18 04:29:10,136 [wrapper] apfmon messages muted
[2025-10-18 05:29:10] 2025-10-18 04:29:10,139 [wrapper] ==== wrapper stdout END ====
[2025-10-18 05:29:10] 2025-10-18 04:29:10,141 [wrapper] ==== wrapper stderr END ====
[2025-10-18 05:29:10]  *** Error codes and diagnostics ***
[2025-10-18 05:29:10]     "exeErrorCode": 0,
[2025-10-18 05:29:10]     "exeErrorDiag": "",
[2025-10-18 05:29:10]     "pilotErrorCode": 0,
[2025-10-18 05:29:10]     "pilotErrorDiag": "",
[2025-10-18 05:29:10]  *** Listing of results directory ***
[2025-10-18 05:29:10] total 435080
[2025-10-18 05:29:10] -rw-r--r-- 1 m m    557409 Oct 17 21:20 pilot3.tar.gz
[2025-10-18 05:29:10] -rw-r--r-- 1 m m      5112 Oct 17 21:30 queuedata.json
[2025-10-18 05:29:10] -rwx------ 1 m m     36292 Oct 17 21:31 runpilot2-wrapper.sh
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m       100 Oct 18 02:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 05:29:10] -rwxr-xr-x 1 m m      7986 Oct 18 02:25 run_atlas
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m       105 Oct 18 02:25 job.xml
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m      5963 Oct 18 02:25 init_data.xml
[2025-10-18 05:29:10] -rw-r--r-- 2 m m 228898796 Oct 18 02:25 EVNT.46771634._000947.pool.root.1
[2025-10-18 05:29:10] -rw-r--r-- 2 m m     15120 Oct 18 02:25 start_atlas.sh
[2025-10-18 05:29:10] drwxrwx--x 2 m m      4096 Oct 18 02:25 shared
[2025-10-18 05:29:10] -rw-r--r-- 2 m m    569671 Oct 18 02:25 input.tar.gz
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m         0 Oct 18 02:25 boinc_lockfile
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m      2556 Oct 18 02:25 pandaJob.out
[2025-10-18 05:29:10] -rw------- 1 m m    976749 Oct 18 02:25 agis_schedconf.cvmfs.json
[2025-10-18 05:29:10] drwx------ 5 m m      4096 Oct 18 02:25 pilot3
[2025-10-18 05:29:10] -rw------- 1 m m 208961580 Oct 18 05:26 HITS.46771637._031206.pool.root.1
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m       530 Oct 18 05:26 boinc_task_state.xml
[2025-10-18 05:29:10] -rw------- 1 m m      1014 Oct 18 05:26 memory_monitor_summary.json
[2025-10-18 05:29:10] -rw------- 1 m m   1560740 Oct 18 05:27 agis_ddmendpoints.agis.ALL.json
[2025-10-18 05:29:10] -rw------- 1 m m        95 Oct 18 05:27 pilot_heartbeat.json
[2025-10-18 05:29:10] -rw------- 1 m m    337378 Oct 18 05:27 log.46771637._031206.job.log.tgz.1
[2025-10-18 05:29:10] -rw------- 1 m m      7761 Oct 18 05:28 heartbeat.json
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m      8192 Oct 18 05:29 boinc_mmap_file
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m        28 Oct 18 05:29 wrapper_checkpoint.txt
[2025-10-18 05:29:10] -rw------- 1 m m      4931 Oct 18 05:29 pilotlog.txt
[2025-10-18 05:29:10] -rw------- 1 m m   1539073 Oct 18 05:29 log.46771637._031206.job.log.1
[2025-10-18 05:29:10] -rw------- 1 m m       357 Oct 18 05:29 output.list
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m       620 Oct 18 05:29 runtime_log
[2025-10-18 05:29:10] -rw------- 1 m m   1894400 Oct 18 05:29 result.tar.gz
[2025-10-18 05:29:10] -rw------- 1 m m       639 Oct 18 05:29 zssLDmzH6T8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRlaMDmkoC5cm.diag
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m      8618 Oct 18 05:29 runtime_log.err
[2025-10-18 05:29:10] -rw-rw-r-- 1 m m     20857 Oct 18 05:29 stderr.txt
[2025-10-18 05:29:10] HITS file was successfully produced:
[2025-10-18 05:29:10] -rw------- 1 m m 208961580 Oct 18 05:26 shared/HITS.pool.root.1
[2025-10-18 05:29:10]  *** Contents of shared directory: ***
[2025-10-18 05:29:10] total 430040
[2025-10-18 05:29:10] -rw-r--r-- 2 m m 228898796 Oct 18 02:25 ATLAS.root_0
[2025-10-18 05:29:10] -rw-r--r-- 2 m m     15120 Oct 18 02:25 start_atlas.sh
[2025-10-18 05:29:10] -rw-r--r-- 2 m m    569671 Oct 18 02:25 input.tar.gz
[2025-10-18 05:29:10] -rw------- 1 m m 208961580 Oct 18 05:26 HITS.pool.root.1
[2025-10-18 05:29:10] -rw------- 1 m m   1894400 Oct 18 05:29 result.tar.gz
05:29:12 (3574): run_atlas exited; CPU time 41956.845641
05:29:12 (3574): called boinc_finish(0)

</stderr_txt>
]]>

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