Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:55:46 (3524): wrapper (7.7.26015): starting
02:55:46 (3524): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 02:55:46] Arguments: --nthreads 4
[2025-10-18 02:55:46] Threads: 4
[2025-10-18 02:55:46] Checking for CVMFS
[2025-10-18 02:55:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 02:56:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 02:56:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 02:56:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 02:56:31] 2.11.5.0 3746 0 23832 151834 3 1 2539354 4194305 0 130560 0 0 0.000 1291 629 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-18 02:56:31] CVMFS is ok
[2025-10-18 02:56:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 02:56:31] Checking for apptainer binary...
[2025-10-18 02:56:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 02:56:31] Running /usr/bin/apptainer --version
[2025-10-18 02:56:32] apptainer version 1.0.3
[2025-10-18 02:56:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 02:56:33] TeeC34
[2025-10-18 02:56:33] apptainer works
[2025-10-18 02:56:33] Set ATHENA_PROC_NUMBER=4
[2025-10-18 02:56:33] Set ATHENA_CORE_NUMBER=4
[2025-10-18 02:56:33] Starting ATLAS job with PandaID=6848006640
[2025-10-18 02:56:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 05:59:26]  *** The last 200 lines of the pilot log: ***
[2025-10-18 05:59:26] 2025-10-18 04:58:26,745 | INFO     | intersect: 7500033456.412613
[2025-10-18 05:59:26] 2025-10-18 04:58:26,745 | INFO     | chi2: 0.1324461533359349
[2025-10-18 05:59:26] 2025-10-18 04:58:26,745 | INFO     | current chi2=0.1324461533359349 (change=90.75440467656286 %)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,746 | INFO     | sum of square deviations: 1444223291.6526964
[2025-10-18 05:59:26] 2025-10-18 04:58:26,747 | INFO     | sum of deviations: 2139367358.341317
[2025-10-18 05:59:26] 2025-10-18 04:58:26,747 | INFO     | mean x: 1760758319.0898204
[2025-10-18 05:59:26] 2025-10-18 04:58:26,747 | INFO     | mean y: 2355270.377245509
[2025-10-18 05:59:26] 2025-10-18 04:58:26,747 | INFO     | -- intersect: -2605904058.7449336
[2025-10-18 05:59:26] 2025-10-18 04:58:26,747 | INFO     | intersect: -2605904058.7449336
[2025-10-18 05:59:26] 2025-10-18 04:58:26,748 | INFO     | chi2: 0.031177094865098502
[2025-10-18 05:59:26] 2025-10-18 04:58:26,748 | INFO     | current chi2=0.031177094865098502 (change=76.46055088816262 %)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,748 | INFO     | sum of square deviations: 1318346589.1111152
[2025-10-18 05:59:26] 2025-10-18 04:58:26,750 | INFO     | sum of deviations: 3386376957.074074
[2025-10-18 05:59:26] 2025-10-18 04:58:26,750 | INFO     | mean x: 1760758471.5925925
[2025-10-18 05:59:26] 2025-10-18 04:58:26,750 | INFO     | mean y: 2353821.3950617285
[2025-10-18 05:59:26] 2025-10-18 04:58:26,750 | INFO     | -- intersect: -4520426428.064491
[2025-10-18 05:59:26] 2025-10-18 04:58:26,750 | INFO     | intersect: -4520426428.064491
[2025-10-18 05:59:26] 2025-10-18 04:58:26,750 | INFO     | chi2: 0.0008777594667833372
[2025-10-18 05:59:26] 2025-10-18 04:58:26,750 | INFO     | current chi2=0.0008777594667833372 (change=97.18460148201315 %)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,751 | INFO     | sum of square deviations: 1200004911.5668824
[2025-10-18 05:59:26] 2025-10-18 04:58:26,752 | INFO     | sum of deviations: 2655531586.6942677
[2025-10-18 05:59:26] 2025-10-18 04:58:26,752 | INFO     | mean x: 1760758624.0955415
[2025-10-18 05:59:26] 2025-10-18 04:58:26,752 | INFO     | mean y: 2354763.420382166
[2025-10-18 05:59:26] 2025-10-18 04:58:26,752 | INFO     | -- intersect: -3894087740.9063563
[2025-10-18 05:59:26] 2025-10-18 04:58:26,752 | INFO     | intersect: -3894087740.9063563
[2025-10-18 05:59:26] 2025-10-18 04:58:26,753 | INFO     | chi2: 0.0005679861933710856
[2025-10-18 05:59:26] 2025-10-18 04:58:26,753 | INFO     | current chi2=0.0005679861933710856 (change=35.29136228487011 %)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,753 | INFO     | sum of square deviations: 1088965696.519733
[2025-10-18 05:59:26] 2025-10-18 04:58:26,754 | INFO     | sum of deviations: 2028233868.8157895
[2025-10-18 05:59:26] 2025-10-18 04:58:26,754 | INFO     | mean x: 1760758776.5986843
[2025-10-18 05:59:26] 2025-10-18 04:58:26,755 | INFO     | mean y: 2355622.0789473685
[2025-10-18 05:59:26] 2025-10-18 04:58:26,755 | INFO     | -- intersect: -3277114610.018848
[2025-10-18 05:59:26] 2025-10-18 04:58:26,755 | INFO     | intersect: -3277114610.018848
[2025-10-18 05:59:26] 2025-10-18 04:58:26,755 | INFO     | chi2: 0.00027752242612707833
[2025-10-18 05:59:26] 2025-10-18 04:58:26,755 | INFO     | current chi2=0.00027752242612707833 (change=51.13923025488701 %)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,755 | INFO     | sum of square deviations: 984996381.4693898
[2025-10-18 05:59:26] 2025-10-18 04:58:26,757 | INFO     | sum of deviations: 1703585333.7755098
[2025-10-18 05:59:26] 2025-10-18 04:58:26,757 | INFO     | mean x: 1760758929.1020408
[2025-10-18 05:59:26] 2025-10-18 04:58:26,757 | INFO     | mean y: 2356098.4149659863
[2025-10-18 05:59:26] 2025-10-18 04:58:26,757 | INFO     | -- intersect: -3042937411.656397
[2025-10-18 05:59:26] 2025-10-18 04:58:26,757 | INFO     | intersect: -3042937411.656397
[2025-10-18 05:59:26] 2025-10-18 04:58:26,757 | INFO     | chi2: 0.0002442771828979618
[2025-10-18 05:59:26] 2025-10-18 04:58:26,757 | INFO     | current chi2=0.0002442771828979618 (change=11.979299724734116 %)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,757 | INFO     | left removable region: 60
[2025-10-18 05:59:26] 2025-10-18 04:58:26,758 | INFO     | sum of square deviations: 424078322.9729731
[2025-10-18 05:59:26] 2025-10-18 04:58:26,758 | INFO     | sum of deviations: 675399170.4324324
[2025-10-18 05:59:26] 2025-10-18 04:58:26,759 | INFO     | mean x: 1760759661.1351352
[2025-10-18 05:59:26] 2025-10-18 04:58:26,759 | INFO     | mean y: 2357395.171171171
[2025-10-18 05:59:26] 2025-10-18 04:58:26,759 | INFO     | -- intersect: -2801878402.8876486
[2025-10-18 05:59:26] 2025-10-18 04:58:26,759 | INFO     | intersect: -2801878402.8876486
[2025-10-18 05:59:26] 2025-10-18 04:58:26,759 | INFO     | chi2: 0.0001820996562743846
[2025-10-18 05:59:26] 2025-10-18 04:58:26,759 | INFO     | -- intersect: -2801878402.8876486
[2025-10-18 05:59:26] 2025-10-18 04:58:26,759 | INFO     | current memory leak: 1.59 B/s (using 111 data points, chi2=0.00)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,759 | INFO     | could have reported an average CPU frequency of 3200 MHz (9 samples)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,760 | INFO     | ..............................
[2025-10-18 05:59:26] 2025-10-18 04:58:26,760 | INFO     | . Timing measurements:
[2025-10-18 05:59:26] 2025-10-18 04:58:26,760 | INFO     | . get job = 0 s
[2025-10-18 05:59:26] 2025-10-18 04:58:26,760 | INFO     | . initial setup = 4 s
[2025-10-18 05:59:26] 2025-10-18 04:58:26,760 | INFO     | . payload setup = 6 s
[2025-10-18 05:59:26] 2025-10-18 04:58:26,760 | INFO     | . stage-in = 0 s
[2025-10-18 05:59:26] 2025-10-18 04:58:26,760 | INFO     | . payload execution = 10797 s
[2025-10-18 05:59:26] 2025-10-18 04:58:26,760 | INFO     | . stage-out = 10 s
[2025-10-18 05:59:26] 2025-10-18 04:58:26,760 | INFO     | . log creation = 0 s
[2025-10-18 05:59:26] 2025-10-18 04:58:26,760 | INFO     | ..............................
[2025-10-18 05:59:26] 2025-10-18 04:58:26,862 | INFO     | 
[2025-10-18 05:59:26] 2025-10-18 04:58:26,862 | INFO     | job summary report
[2025-10-18 05:59:26] 2025-10-18 04:58:26,862 | INFO     | --------------------------------------------------
[2025-10-18 05:59:26] 2025-10-18 04:58:26,862 | INFO     | PanDA job id: 6848006640
[2025-10-18 05:59:26] 2025-10-18 04:58:26,862 | INFO     | task id: 46771637
[2025-10-18 05:59:26] 2025-10-18 04:58:26,862 | INFO     | errors: (none)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,862 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 05:59:26] 2025-10-18 04:58:26,862 | INFO     | pilot state: finished 
[2025-10-18 05:59:26] 2025-10-18 04:58:26,862 | INFO     | transexitcode: 0
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | exeerrorcode: 0
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | exeerrordiag: 
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | exitcode: 0
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | exitmsg: OK
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | cpuconsumptiontime: 41328 s
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | nevents: 400
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | neventsw: 0
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | pid: 14200
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | pgrp: 14200
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | corecount: 4
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | event service: False
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | sizes: {0: 2348927, 1: 2348927, 3: 2349217, 11: 2349245, 10807: 2378298, 10818: 2387478, 10871: 2387680}
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | --------------------------------------------------
[2025-10-18 05:59:26] 2025-10-18 04:58:26,863 | INFO     | 
[2025-10-18 05:59:26] 2025-10-18 04:58:26,864 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-18 05:59:26] 2025-10-18 04:58:26,871 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 05:59:26] 2025-10-18 04:58:26,873 | INFO     | job 6848006640 has completed (purged errors)
[2025-10-18 05:59:26] 2025-10-18 04:58:26,873 | INFO     | overall cleanup function is called
[2025-10-18 05:59:26] 2025-10-18 04:58:27,880 | INFO     | --- collectZombieJob: --- 10, [14200]
[2025-10-18 05:59:26] 2025-10-18 04:58:27,880 | INFO     | zombie collector waiting for pid 14200
[2025-10-18 05:59:26] 2025-10-18 04:58:27,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 05:59:26] 2025-10-18 04:58:27,881 | INFO     | collected zombie processes
[2025-10-18 05:59:26] 2025-10-18 04:58:27,881 | INFO     | will attempt to kill all subprocesses of pid=14200
[2025-10-18 05:59:26] 2025-10-18 04:58:27,955 | INFO     | process IDs to be killed: [14200] (in reverse order)
[2025-10-18 05:59:26] 2025-10-18 04:58:27,979 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 05:59:26] 2025-10-18 04:58:27,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 05:59:26] 2025-10-18 04:58:27,981 | INFO     | did not find any defunct processes belonging to 14200
[2025-10-18 05:59:26] 2025-10-18 04:58:27,983 | INFO     | did not find any defunct processes belonging to 14200
[2025-10-18 05:59:26] 2025-10-18 04:58:27,983 | INFO     | ready for new job
[2025-10-18 05:59:26] 2025-10-18 04:58:27,983 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 05:59:26] 2025-10-18 04:58:27,984 | INFO     | ***************************************
[2025-10-18 05:59:26] 2025-10-18 04:58:27,984 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 05:59:26] 2025-10-18 04:58:27,984 | INFO     | ***************************************
[2025-10-18 05:59:26] 2025-10-18 04:58:27,984 | INFO     | 
[2025-10-18 05:59:26] 2025-10-18 04:58:28,006 | INFO     | architecture information:
[2025-10-18 05:59:26] 2025-10-18 04:58:28,007 | INFO     | executing command: cat /etc/os-release
[2025-10-18 05:59:26] 2025-10-18 04:58:28,014 | INFO     | cat /etc/os-release:
[2025-10-18 05:59:26] NAME="CentOS Linux"
[2025-10-18 05:59:26] VERSION="7 (Core)"
[2025-10-18 05:59:26] ID="centos"
[2025-10-18 05:59:26] ID_LIKE="rhel fedora"
[2025-10-18 05:59:26] VERSION_ID="7"
[2025-10-18 05:59:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 05:59:26] ANSI_COLOR="0;31"
[2025-10-18 05:59:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 05:59:26] HOME_URL="https://www.centos.org/"
[2025-10-18 05:59:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 05:59:26] 
[2025-10-18 05:59:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 05:59:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 05:59:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 05:59:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 05:59:26] 
[2025-10-18 05:59:26] 2025-10-18 04:58:28,014 | INFO     | ***************************************
[2025-10-18 05:59:26] 2025-10-18 04:58:28,517 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-18 05:59:26] 2025-10-18 04:58:28,528 | INFO     | sufficient remaining disk space (425959882752 B)
[2025-10-18 05:59:26] 2025-10-18 04:58:28,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 05:59:26] 2025-10-18 04:58:28,529 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 05:59:26] 2025-10-18 04:58:28,529 | INFO     | update_server=False
[2025-10-18 05:59:26] 2025-10-18 04:58:28,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 05:59:26] 2025-10-18 04:58:28,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:59:26] 2025-10-18 04:58:28,874 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 05:59:26] 2025-10-18 04:58:28,875 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 05:59:26] 2025-10-18 04:58:28,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:59:26] 2025-10-18 04:58:28,875 | INFO     | will abort loop
[2025-10-18 05:59:26] 2025-10-18 04:58:29,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 05:59:26] 2025-10-18 04:58:29,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 05:59:26] 2025-10-18 04:58:29,509 | INFO     | all data control threads have been joined
[2025-10-18 05:59:26] 2025-10-18 04:58:29,536 | INFO     | [job] retrieve thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:29,537 | INFO     | [job] queue monitor thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:29,779 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:29,787 | INFO     | [data] copytool_in thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:29,881 | INFO     | [job] job monitor thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:29,915 | INFO     | all payload control threads have been joined
[2025-10-18 05:59:26] 2025-10-18 04:58:30,104 | INFO     | all job control threads have been joined
[2025-10-18 05:59:26] 2025-10-18 04:58:30,225 | INFO     | [payload] validate_post thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:30,278 | INFO     | [job] validate thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:30,509 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:30,514 | INFO     | [data] control thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:30,709 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:30,787 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:30,921 | INFO     | [payload] control thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:30,998 | INFO     | [payload] failed_post thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:31,110 | INFO     | [job] control thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:31,231 | INFO     | [data] copytool_out thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:33,319 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 05:59:26] 2025-10-18 04:58:58,251 | INFO     | PID=7835 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 05:59:26] 2025-10-18 04:58:58,251 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 05:59:26] 2025-10-18 04:58:58,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 05:59:26] 2025-10-18 04:58:58,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 05:59:26] 2025-10-18 04:59:19,970 | INFO     | [monitor] cgroup control has ended
[2025-10-18 05:59:26] 2025-10-18 04:59:21,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591253346112)>', '<ExcThread(monitor, started 140590805128960)>']
[2025-10-18 05:59:26] 2025-10-18 04:59:22,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 05:59:26] 2025-10-18 04:59:22,371 | INFO     | [monitor] control thread has ended
[2025-10-18 05:59:26] 2025-10-18 04:59:26,687 | INFO     | all workflow threads have been joined
[2025-10-18 05:59:26] 2025-10-18 04:59:26,687 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 05:59:26] 2025-10-18 04:59:26,688 | INFO     | traces error code: 0
[2025-10-18 05:59:26] 2025-10-18 04:59:26,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 05:59:26] 2025-10-18 04:59:26,797 [wrapper] ==== pilot stdout END ====
[2025-10-18 05:59:26] 2025-10-18 04:59:26,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 05:59:26] 2025-10-18 04:59:26,800 [wrapper] pilotpid: 7835
[2025-10-18 05:59:26] 2025-10-18 04:59:26,802 [wrapper] Pilot exit status: 0
[2025-10-18 05:59:26] 2025-10-18 04:59:26,815 [wrapper] pandaids: 6848006640
[2025-10-18 05:59:26] 2025-10-18 04:59:26,832 [wrapper] cleanup supervisor_pilot  1119 7836
[2025-10-18 05:59:26] 2025-10-18 04:59:26,834 [wrapper] Test setup, not cleaning
[2025-10-18 05:59:26] 2025-10-18 04:59:26,836 [wrapper] apfmon messages muted
[2025-10-18 05:59:26] 2025-10-18 04:59:26,837 [wrapper] ==== wrapper stdout END ====
[2025-10-18 05:59:26] 2025-10-18 04:59:26,839 [wrapper] ==== wrapper stderr END ====
[2025-10-18 05:59:26]  *** Error codes and diagnostics ***
[2025-10-18 05:59:26]     "exeErrorCode": 0,
[2025-10-18 05:59:26]     "exeErrorDiag": "",
[2025-10-18 05:59:26]     "pilotErrorCode": 0,
[2025-10-18 05:59:26]     "pilotErrorDiag": "",
[2025-10-18 05:59:26]  *** Listing of results directory ***
[2025-10-18 05:59:26] total 436772
[2025-10-18 05:59:26] -rw-r--r-- 1 m m    557409 Oct 17 20:54 pilot3.tar.gz
[2025-10-18 05:59:26] -rw-r--r-- 1 m m      5112 Oct 17 21:14 queuedata.json
[2025-10-18 05:59:26] -rwx------ 1 m m     36292 Oct 17 21:16 runpilot2-wrapper.sh
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m       100 Oct 18 02:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 05:59:26] -rwxr-xr-x 1 m m      7986 Oct 18 02:55 run_atlas
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m       105 Oct 18 02:55 job.xml
[2025-10-18 05:59:26] -rw-r--r-- 2 m m     15120 Oct 18 02:55 start_atlas.sh
[2025-10-18 05:59:26] drwxrwx--x 2 m m      4096 Oct 18 02:55 shared
[2025-10-18 05:59:26] -rw-r--r-- 2 m m    569677 Oct 18 02:55 input.tar.gz
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m      6015 Oct 18 02:55 init_data.xml
[2025-10-18 05:59:26] -rw-r--r-- 2 m m 231058683 Oct 18 02:55 EVNT.46771634._001379.pool.root.1
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m         0 Oct 18 02:55 boinc_lockfile
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m      2557 Oct 18 02:56 pandaJob.out
[2025-10-18 05:59:26] -rw------- 1 m m    976749 Oct 18 02:56 agis_schedconf.cvmfs.json
[2025-10-18 05:59:26] drwx------ 5 m m      4096 Oct 18 02:57 pilot3
[2025-10-18 05:59:26] -rw------- 1 m m 208517911 Oct 18 05:56 HITS.46771637._030915.pool.root.1
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m       530 Oct 18 05:57 boinc_task_state.xml
[2025-10-18 05:59:26] -rw------- 1 m m      1030 Oct 18 05:57 memory_monitor_summary.json
[2025-10-18 05:59:26] -rw------- 1 m m   1560740 Oct 18 05:57 agis_ddmendpoints.agis.ALL.json
[2025-10-18 05:59:26] -rw------- 1 m m    349888 Oct 18 05:57 log.46771637._030915.job.log.tgz.1
[2025-10-18 05:59:26] -rw------- 1 m m        95 Oct 18 05:58 pilot_heartbeat.json
[2025-10-18 05:59:26] -rw------- 1 m m      7802 Oct 18 05:58 heartbeat.json
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m      8192 Oct 18 05:59 boinc_mmap_file
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m        28 Oct 18 05:59 wrapper_checkpoint.txt
[2025-10-18 05:59:26] -rw------- 1 m m      4931 Oct 18 05:59 pilotlog.txt
[2025-10-18 05:59:26] -rw------- 1 m m   1537146 Oct 18 05:59 log.46771637._030915.job.log.1
[2025-10-18 05:59:26] -rw------- 1 m m       357 Oct 18 05:59 output.list
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m       620 Oct 18 05:59 runtime_log
[2025-10-18 05:59:26] -rw------- 1 m m   1904640 Oct 18 05:59 result.tar.gz
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m      8618 Oct 18 05:59 runtime_log.err
[2025-10-18 05:59:26] -rw------- 1 m m       645 Oct 18 05:59 6KNMDm525T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjmuNDm8t8Tcn.diag
[2025-10-18 05:59:26] -rw-rw-r-- 1 m m     20698 Oct 18 05:59 stderr.txt
[2025-10-18 05:59:26] HITS file was successfully produced:
[2025-10-18 05:59:26] -rw------- 1 m m 208517911 Oct 18 05:56 shared/HITS.pool.root.1
[2025-10-18 05:59:26]  *** Contents of shared directory: ***
[2025-10-18 05:59:26] total 431720
[2025-10-18 05:59:26] -rw-r--r-- 2 m m     15120 Oct 18 02:55 start_atlas.sh
[2025-10-18 05:59:26] -rw-r--r-- 2 m m    569677 Oct 18 02:55 input.tar.gz
[2025-10-18 05:59:26] -rw-r--r-- 2 m m 231058683 Oct 18 02:55 ATLAS.root_0
[2025-10-18 05:59:26] -rw------- 1 m m 208517911 Oct 18 05:56 HITS.pool.root.1
[2025-10-18 05:59:26] -rw------- 1 m m   1904640 Oct 18 05:59 result.tar.gz
05:59:28 (3524): run_atlas exited; CPU time 41439.843184
05:59:28 (3524): called boinc_finish(0)

</stderr_txt>
]]>

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