Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:58:39 (1089824): wrapper (7.7.26015): starting
12:58:39 (1089824): wrapper: running run_atlas (--nthreads 3)
[2025-10-18 12:58:39] Arguments: --nthreads 3
[2025-10-18 12:58:39] Threads: 3
[2025-10-18 12:58:39] Checking for CVMFS
[2025-10-18 12:58:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 12:58:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 12:58:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 12:58:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 12:58:39] 2.9.2.0 114696 3381 82696 151848 2 57 31069711 36864001 0 130560 0 2527973 99.990 123807 2720 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 12:58:39] CVMFS is ok
[2025-10-18 12:58:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 12:58:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 12:58:39] Further information can be found at the LHC@home message board.
[2025-10-18 12:58:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 12:58:39] Checking for apptainer binary...
[2025-10-18 12:58:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 12:58:39] Running /usr/bin/apptainer --version
[2025-10-18 12:58:39] apptainer version 1.4.1-1.1
[2025-10-18 12:58:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 12:58:39] magicA246a
[2025-10-18 12:58:39] apptainer works
[2025-10-18 12:58:39] Set ATHENA_PROC_NUMBER=3
[2025-10-18 12:58:39] Set ATHENA_CORE_NUMBER=3
[2025-10-18 12:58:39] Starting ATLAS job with PandaID=6848001842
[2025-10-18 12:58:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 14:23:04]  *** The last 200 lines of the pilot log: ***
[2025-10-18 14:23:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 14:23:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 14:23:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 14:23:04] 
[2025-10-18 14:23:04] 2025-10-18 12:22:47,248 | INFO     | ***************************************
[2025-10-18 14:23:04] 2025-10-18 12:22:47,751 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-18 14:23:04] 2025-10-18 12:22:47,764 | INFO     | sufficient remaining disk space (273241079808 B)
[2025-10-18 14:23:04] 2025-10-18 12:22:47,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 14:23:04] 2025-10-18 12:22:47,765 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 14:23:04] 2025-10-18 12:22:47,765 | INFO     | update_server=False
[2025-10-18 14:23:04] 2025-10-18 12:22:47,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 14:23:04] 2025-10-18 12:22:47,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 14:23:04] 2025-10-18 12:22:47,765 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 14:23:04] 2025-10-18 12:22:47,765 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-18 14:23:04] 2025-10-18 12:22:47,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 14:23:04] 2025-10-18 12:22:47,765 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 14:23:04] 2025-10-18 12:22:47,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 14:23:04] 2025-10-18 12:22:47,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 14:23:04] 2025-10-18 12:22:47,865 | INFO     | all job control threads have been joined
[2025-10-18 14:23:04] 2025-10-18 12:22:48,056 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 14:23:04] 2025-10-18 12:22:48,056 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 14:23:04] 2025-10-18 12:22:48,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 14:23:04] 2025-10-18 12:22:48,056 | INFO     | will abort loop
[2025-10-18 14:23:04] 2025-10-18 12:22:48,076 | INFO     | all data control threads have been joined
[2025-10-18 14:23:04] 2025-10-18 12:22:48,400 | INFO     | all payload control threads have been joined
[2025-10-18 14:23:04] 2025-10-18 12:22:48,770 | INFO     | [job] retrieve thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:48,771 | INFO     | [job] queue monitor thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:48,776 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:48,871 | INFO     | [job] control thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:49,062 | INFO     | [job] job monitor thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:49,081 | INFO     | [data] control thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:49,263 | INFO     | [payload] validate_post thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:49,406 | INFO     | [payload] control thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:49,669 | INFO     | [data] copytool_in thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:49,771 | INFO     | [data] copytool_out thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:49,808 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:50,163 | INFO     | [job] validate thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:50,260 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:50,326 | INFO     | [payload] failed_post thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:50,508 | INFO     | [monitor] cgroup control has ended
[2025-10-18 14:23:04] 2025-10-18 12:22:51,772 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:58,214 | INFO     | job.realtimelogging is not enabled
[2025-10-18 14:23:04] 2025-10-18 12:22:59,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 14:23:04] 2025-10-18 12:22:59,756 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945785665344)>', '<ExcThread(monitor, started 139944991385344)>']
[2025-10-18 14:23:04] 2025-10-18 12:22:59,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 14:23:04] 2025-10-18 12:22:59,829 | INFO     | [monitor] control thread has ended
[2025-10-18 14:23:04] 2025-10-18 12:23:04,782 | INFO     | all workflow threads have been joined
[2025-10-18 14:23:04] 2025-10-18 12:23:04,782 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 14:23:04] 2025-10-18 12:23:04,782 | INFO     | traces error code: 0
[2025-10-18 14:23:04] 2025-10-18 12:23:04,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 14:23:04] 2025-10-18 12:23:04,835 [wrapper] ==== pilot stdout END ====
[2025-10-18 14:23:04] 2025-10-18 12:23:04,838 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 14:23:04] 2025-10-18 12:23:04,840 [wrapper] pilotpid: 1093538
[2025-10-18 14:23:04] 2025-10-18 12:23:04,842 [wrapper] Pilot exit status: 0
[2025-10-18 14:23:04] 2025-10-18 12:23:04,849 [wrapper] pandaids: 6848001842
[2025-10-18 14:23:04] 2025-10-18 12:23:04,865 [wrapper] cleanup supervisor_pilot 1112690 1093539
[2025-10-18 14:23:04] 2025-10-18 12:23:04,868 [wrapper] Test setup, not cleaning
[2025-10-18 14:23:04] 2025-10-18 12:23:04,870 [wrapper] apfmon messages muted
[2025-10-18 14:23:04] 2025-10-18 12:23:04,872 [wrapper] ==== wrapper stdout END ====
[2025-10-18 14:23:04] 2025-10-18 12:23:04,875 [wrapper] ==== wrapper stderr END ====
[2025-10-18 14:23:04]  *** Error codes and diagnostics ***
[2025-10-18 14:23:04]     "exeErrorCode": 0,
[2025-10-18 14:23:04]     "exeErrorDiag": "",
[2025-10-18 14:23:04]     "pilotErrorCode": 0,
[2025-10-18 14:23:04]     "pilotErrorDiag": "",
[2025-10-18 14:23:04]  *** Listing of results directory ***
[2025-10-18 14:23:04] total 426368
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc    557409 Oct 17 18:47 pilot3.tar.gz
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc      5112 Oct 17 19:13 queuedata.json
[2025-10-18 14:23:04] -rwx------ 1 boinc boinc     36292 Oct 17 19:13 runpilot2-wrapper.sh
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc       100 Oct 18 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 14:23:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 12:58 run_atlas
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc       105 Oct 18 12:58 job.xml
[2025-10-18 14:23:04] -rw-r--r-- 2 boinc boinc 229167890 Oct 18 12:58 EVNT.46771634._001318.pool.root.1
[2025-10-18 14:23:04] -rw-r--r-- 2 boinc boinc    569675 Oct 18 12:58 input.tar.gz
[2025-10-18 14:23:04] -rw-r--r-- 2 boinc boinc     15120 Oct 18 12:58 start_atlas.sh
[2025-10-18 14:23:04] drwxrwx--x 2 boinc boinc      4096 Oct 18 12:58 shared
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc         0 Oct 18 12:58 boinc_setup_complete
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc      6447 Oct 18 12:58 init_data.xml
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc         0 Oct 18 12:58 boinc_lockfile
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc      2558 Oct 18 12:58 pandaJob.out
[2025-10-18 14:23:04] -rw------- 1 boinc boinc    976749 Oct 18 12:58 agis_schedconf.cvmfs.json
[2025-10-18 14:23:04] -rw------- 1 boinc boinc   1560740 Oct 18 12:58 agis_ddmendpoints.agis.ALL.json
[2025-10-18 14:23:04] drwx------ 5 boinc boinc      4096 Oct 18 12:58 pilot3
[2025-10-18 14:23:04] -rw------- 1 boinc boinc        95 Oct 18 14:22 pilot_heartbeat.json
[2025-10-18 14:23:04] -rw------- 1 boinc boinc 201541260 Oct 18 14:22 HITS.46771637._029422.pool.root.1
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc       529 Oct 18 14:22 boinc_task_state.xml
[2025-10-18 14:23:04] -rw------- 1 boinc boinc      1030 Oct 18 14:22 memory_monitor_summary.json
[2025-10-18 14:23:04] -rw------- 1 boinc boinc    260056 Oct 18 14:22 log.46771637._029422.job.log.tgz.1
[2025-10-18 14:23:04] -rw------- 1 boinc boinc      7762 Oct 18 14:22 heartbeat.json
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc      8192 Oct 18 14:22 boinc_mmap_file
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc        27 Oct 18 14:22 wrapper_checkpoint.txt
[2025-10-18 14:23:04] -rw------- 1 boinc boinc      4814 Oct 18 14:23 pilotlog.txt
[2025-10-18 14:23:04] -rw------- 1 boinc boinc    739214 Oct 18 14:23 log.46771637._029422.job.log.1
[2025-10-18 14:23:04] -rw------- 1 boinc boinc       357 Oct 18 14:23 output.list
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc       620 Oct 18 14:23 runtime_log
[2025-10-18 14:23:04] -rw------- 1 boinc boinc   1013760 Oct 18 14:23 result.tar.gz
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc      8797 Oct 18 14:23 runtime_log.err
[2025-10-18 14:23:04] -rw------- 1 boinc boinc       662 Oct 18 14:23 I4fLDmYC3T8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFXaMDmRSPolm.diag
[2025-10-18 14:23:04] -rw-r--r-- 1 boinc boinc      8403 Oct 18 14:23 stderr.txt
[2025-10-18 14:23:04] HITS file was successfully produced:
[2025-10-18 14:23:04] -rw------- 1 boinc boinc 201541260 Oct 18 14:22 shared/HITS.pool.root.1
[2025-10-18 14:23:04]  *** Contents of shared directory: ***
[2025-10-18 14:23:04] total 422196
[2025-10-18 14:23:04] -rw-r--r-- 2 boinc boinc 229167890 Oct 18 12:58 ATLAS.root_0
[2025-10-18 14:23:04] -rw-r--r-- 2 boinc boinc    569675 Oct 18 12:58 input.tar.gz
[2025-10-18 14:23:04] -rw-r--r-- 2 boinc boinc     15120 Oct 18 12:58 start_atlas.sh
[2025-10-18 14:23:04] -rw------- 1 boinc boinc 201541260 Oct 18 14:22 HITS.pool.root.1
[2025-10-18 14:23:04] -rw------- 1 boinc boinc   1013760 Oct 18 14:23 result.tar.gz
14:23:06 (1089824): run_atlas exited; CPU time 14432.109857
14:23:06 (1089824): called boinc_finish(0)

</stderr_txt>
]]>

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