Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:45:51 (1490987): wrapper (7.7.26015): starting
12:45:51 (1490987): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 12:45:51] Arguments: --nthreads 4
[2025-10-18 12:45:51] Threads: 4
[2025-10-18 12:45:51] Checking for CVMFS
[2025-10-18 12:45:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 12:45:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 12:45:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 12:45:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 12:45:51] 2.9.2.0 85452 3389 98016 151848 2 57 23285038 36864000 0 130560 0 3710128 99.993 125368 2567 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 12:45:51] CVMFS is ok
[2025-10-18 12:45:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 12:45:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 12:45:51] Further information can be found at the LHC@home message board.
[2025-10-18 12:45:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 12:45:51] Checking for apptainer binary...
[2025-10-18 12:45:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 12:45:51] Running /usr/bin/apptainer --version
[2025-10-18 12:45:51] apptainer version 1.4.1-1.1
[2025-10-18 12:45:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 12:45:51] thA373a
[2025-10-18 12:45:51] apptainer works
[2025-10-18 12:45:51] Set ATHENA_PROC_NUMBER=4
[2025-10-18 12:45:51] Set ATHENA_CORE_NUMBER=4
[2025-10-18 12:45:51] Starting ATLAS job with PandaID=6849153337
[2025-10-18 12:45:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 13:42:08]  *** The last 200 lines of the pilot log: ***
[2025-10-18 13:42:08] 2025-10-18 11:41:20,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:42:08] 2025-10-18 11:41:20,302 | INFO     | will abort loop
[2025-10-18 13:42:08] 2025-10-18 11:41:20,599 | INFO     | all job control threads have been joined
[2025-10-18 13:42:08] 2025-10-18 11:41:20,600 | INFO     | all payload control threads have been joined
[2025-10-18 13:42:08] 2025-10-18 11:41:20,961 | INFO     | [job] retrieve thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:20,961 | INFO     | [job] queue monitor thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,001 | INFO     | all data control threads have been joined
[2025-10-18 13:42:08] 2025-10-18 11:41:21,007 | INFO     | [job] validate thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,062 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,176 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,308 | INFO     | [job] job monitor thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,341 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,348 | INFO     | [payload] failed_post thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,434 | INFO     | [data] copytool_in thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,606 | INFO     | [payload] control thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,606 | INFO     | [job] control thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,869 | INFO     | [payload] validate_post thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,962 | INFO     | [data] copytool_out thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:21,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 13:42:08] 2025-10-18 11:41:22,007 | INFO     | [data] control thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:22,425 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:41:25,990 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 13:42:08] 2025-10-18 11:42:02,228 | INFO     | [monitor] cgroup control has ended
[2025-10-18 13:42:08] 2025-10-18 11:42:02,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555921897280)>', '<ExcThread(monitor, started 140555640080128)>']
[2025-10-18 13:42:08] 2025-10-18 11:42:03,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 13:42:08] 2025-10-18 11:42:03,185 | INFO     | [monitor] control thread has ended
[2025-10-18 13:42:08] 2025-10-18 11:42:08,016 | INFO     | all workflow threads have been joined
[2025-10-18 13:42:08] 2025-10-18 11:42:08,017 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 13:42:08] 2025-10-18 11:42:08,017 | INFO     | traces error code: 0
[2025-10-18 13:42:08] 2025-10-18 11:42:08,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 13:42:08] 2025-10-18 11:42:08,095 [wrapper] ==== pilot stdout END ====
[2025-10-18 13:42:08] 2025-10-18 11:42:08,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 13:42:08] 2025-10-18 11:42:08,103 [wrapper] pilotpid: 1494803
[2025-10-18 13:42:08] 2025-10-18 11:42:08,107 [wrapper] Pilot exit status: 0
[2025-10-18 13:42:08] 2025-10-18 11:42:08,118 [wrapper] pandaids: 6849153337
[2025-10-18 13:42:08] 2025-10-18 11:42:08,141 [wrapper] cleanup supervisor_pilot 1511148 1494804
[2025-10-18 13:42:08] 2025-10-18 11:42:08,145 [wrapper] Test setup, not cleaning
[2025-10-18 13:42:08] 2025-10-18 11:42:08,149 [wrapper] apfmon messages muted
[2025-10-18 13:42:08] 2025-10-18 11:42:08,152 [wrapper] ==== wrapper stdout END ====
[2025-10-18 13:42:08] 2025-10-18 11:42:08,156 [wrapper] ==== wrapper stderr END ====
[2025-10-18 13:42:08]  *** Error codes and diagnostics ***
[2025-10-18 13:42:08]     "exeErrorCode": 0,
[2025-10-18 13:42:08]     "exeErrorDiag": "",
[2025-10-18 13:42:08]     "pilotErrorCode": 0,
[2025-10-18 13:42:08]     "pilotErrorDiag": "",
[2025-10-18 13:42:08]  *** Listing of results directory ***
[2025-10-18 13:42:08] total 329960
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc    557409 Oct 17 21:01 pilot3.tar.gz
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc      5112 Oct 17 21:13 queuedata.json
[2025-10-18 13:42:08] -rwx------ 1 boinc boinc     36292 Oct 17 21:13 runpilot2-wrapper.sh
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc       100 Oct 18 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 13:42:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 12:45 run_atlas
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc       105 Oct 18 12:45 job.xml
[2025-10-18 13:42:08] -rw-r--r-- 2 boinc boinc 190464760 Oct 18 12:45 EVNT.46809186._000024.pool.root.1
[2025-10-18 13:42:08] -rw-r--r-- 2 boinc boinc    569667 Oct 18 12:45 input.tar.gz
[2025-10-18 13:42:08] -rw-r--r-- 2 boinc boinc     15120 Oct 18 12:45 start_atlas.sh
[2025-10-18 13:42:08] drwxrwx--x 2 boinc boinc      4096 Oct 18 12:45 shared
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc         0 Oct 18 12:45 boinc_setup_complete
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc      6376 Oct 18 12:45 init_data.xml
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc         0 Oct 18 12:45 boinc_lockfile
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc      2488 Oct 18 12:45 pandaJob.out
[2025-10-18 13:42:08] -rw------- 1 boinc boinc    976749 Oct 18 12:45 agis_schedconf.cvmfs.json
[2025-10-18 13:42:08] -rw------- 1 boinc boinc   1560740 Oct 18 12:45 agis_ddmendpoints.agis.ALL.json
[2025-10-18 13:42:08] drwx------ 5 boinc boinc      4096 Oct 18 12:45 pilot3
[2025-10-18 13:42:08] -rw------- 1 boinc boinc 142049073 Oct 18 13:40 HITS.46809188._001083.pool.root.1
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc       529 Oct 18 13:41 boinc_task_state.xml
[2025-10-18 13:42:08] -rw------- 1 boinc boinc      1019 Oct 18 13:41 memory_monitor_summary.json
[2025-10-18 13:42:08] -rw------- 1 boinc boinc    237288 Oct 18 13:41 log.46809188._001083.job.log.tgz.1
[2025-10-18 13:42:08] -rw------- 1 boinc boinc        95 Oct 18 13:41 pilot_heartbeat.json
[2025-10-18 13:42:08] -rw------- 1 boinc boinc      7767 Oct 18 13:41 heartbeat.json
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc        27 Oct 18 13:41 wrapper_checkpoint.txt
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc      8192 Oct 18 13:41 boinc_mmap_file
[2025-10-18 13:42:08] -rw------- 1 boinc boinc      4742 Oct 18 13:42 pilotlog.txt
[2025-10-18 13:42:08] -rw------- 1 boinc boinc    503453 Oct 18 13:42 log.46809188._001083.job.log.1
[2025-10-18 13:42:08] -rw------- 1 boinc boinc       357 Oct 18 13:42 output.list
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc       620 Oct 18 13:42 runtime_log
[2025-10-18 13:42:08] -rw------- 1 boinc boinc    757760 Oct 18 13:42 result.tar.gz
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc      8782 Oct 18 13:42 runtime_log.err
[2025-10-18 13:42:08] -rw------- 1 boinc boinc       658 Oct 18 13:42 NagNDmo44T8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjfaMDmWvoL1n.diag
[2025-10-18 13:42:08] -rw-r--r-- 1 boinc boinc      6383 Oct 18 13:42 stderr.txt
[2025-10-18 13:42:08] HITS file was successfully produced:
[2025-10-18 13:42:08] -rw------- 1 boinc boinc 142049073 Oct 18 13:40 shared/HITS.pool.root.1
[2025-10-18 13:42:08]  *** Contents of shared directory: ***
[2025-10-18 13:42:08] total 326048
[2025-10-18 13:42:08] -rw-r--r-- 2 boinc boinc 190464760 Oct 18 12:45 ATLAS.root_0
[2025-10-18 13:42:08] -rw-r--r-- 2 boinc boinc    569667 Oct 18 12:45 input.tar.gz
[2025-10-18 13:42:08] -rw-r--r-- 2 boinc boinc     15120 Oct 18 12:45 start_atlas.sh
[2025-10-18 13:42:08] -rw------- 1 boinc boinc 142049073 Oct 18 13:40 HITS.pool.root.1
[2025-10-18 13:42:08] -rw------- 1 boinc boinc    757760 Oct 18 13:42 result.tar.gz
13:42:10 (1490987): run_atlas exited; CPU time 12288.957039
13:42:10 (1490987): called boinc_finish(0)

</stderr_txt>
]]>

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