Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:41 (17161): wrapper (7.7.26015): starting
19:02:41 (17161): wrapper: running run_atlas (--nthreads 8)
[2025-10-17 19:02:41] Arguments: --nthreads 8
[2025-10-17 19:02:41] Threads: 8
[2025-10-17 19:02:41] Checking for CVMFS
[2025-10-17 19:02:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 19:02:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 19:02:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 19:02:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 19:02:41] 2.11.2.0 2864 22183 76880 151831 0 59 17716109 20275200 1 130560 0 13836602 99.989 754681 40221 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-17 19:02:41] CVMFS is ok
[2025-10-17 19:02:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 19:02:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 19:02:41] Further information can be found at the LHC@home message board.
[2025-10-17 19:02:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 19:02:41] Checking for apptainer binary...
[2025-10-17 19:02:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 19:02:41] Running /usr/bin/apptainer --version
[2025-10-17 19:02:41] apptainer version 1.3.2-1.el7
[2025-10-17 19:02:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 19:02:43] c-115-17.aglt2.org
[2025-10-17 19:02:43] apptainer works
[2025-10-17 19:02:43] Set ATHENA_PROC_NUMBER=8
[2025-10-17 19:02:43] Set ATHENA_CORE_NUMBER=8
[2025-10-17 19:02:43] Starting ATLAS job with PandaID=6848002619
[2025-10-17 19:02:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 21:05:18]  *** The last 200 lines of the pilot log: ***
[2025-10-17 21:05:18] 2025-10-18 01:04:29,437 | INFO     | chi2: 1.290031228916622
[2025-10-17 21:05:18] 2025-10-18 01:04:29,437 | INFO     | current chi2=1.290031228916622 (change=-0.1565012277772103 %)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,437 | INFO     | right removable region: 113
[2025-10-17 21:05:18] 2025-10-18 01:04:29,437 | INFO     | sum of square deviations: 459366752.5
[2025-10-17 21:05:18] 2025-10-18 01:04:29,438 | INFO     | sum of deviations: -5032799021.999999
[2025-10-17 21:05:18] 2025-10-18 01:04:29,438 | INFO     | mean x: 1760745962.5
[2025-10-17 21:05:18] 2025-10-18 01:04:29,438 | INFO     | mean y: 2562188.9298245613
[2025-10-17 21:05:18] 2025-10-18 01:04:29,438 | INFO     | -- intersect: 19293206341.633163
[2025-10-17 21:05:18] 2025-10-18 01:04:29,438 | INFO     | intersect: 19293206341.633163
[2025-10-17 21:05:18] 2025-10-18 01:04:29,438 | INFO     | chi2: 0.07393611986768749
[2025-10-17 21:05:18] 2025-10-18 01:04:29,438 | INFO     | current chi2=0.07393611986768749 (change=94.25968696391632 %)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,439 | INFO     | sum of square deviations: 401533110.0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,439 | INFO     | sum of deviations: -2761751088.0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,439 | INFO     | mean x: 1760746115.0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,439 | INFO     | mean y: 2556083.8440366974
[2025-10-17 21:05:18] 2025-10-18 01:04:29,439 | INFO     | -- intersect: 12112995740.471663
[2025-10-17 21:05:18] 2025-10-18 01:04:29,439 | INFO     | intersect: 12112995740.471663
[2025-10-17 21:05:18] 2025-10-18 01:04:29,440 | INFO     | chi2: 0.05412684782592062
[2025-10-17 21:05:18] 2025-10-18 01:04:29,440 | INFO     | current chi2=0.05412684782592062 (change=26.79241496201935 %)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,440 | INFO     | sum of square deviations: 348769330.0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,440 | INFO     | sum of deviations: 1191286568.0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,441 | INFO     | mean x: 1760746267.5
[2025-10-17 21:05:18] 2025-10-18 01:04:29,441 | INFO     | mean y: 2544640.923076923
[2025-10-17 21:05:18] 2025-10-18 01:04:29,441 | INFO     | -- intersect: -6011611988.413812
[2025-10-17 21:05:18] 2025-10-18 01:04:29,441 | INFO     | intersect: -6011611988.413812
[2025-10-17 21:05:18] 2025-10-18 01:04:29,441 | INFO     | chi2: 0.011936336970844048
[2025-10-17 21:05:18] 2025-10-18 01:04:29,441 | INFO     | current chi2=0.011936336970844048 (change=77.94747440450818 %)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,441 | INFO     | sum of square deviations: 300842850.0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,442 | INFO     | sum of deviations: 1670831724.0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,442 | INFO     | mean x: 1760746420.0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,442 | INFO     | mean y: 2543220.1717171716
[2025-10-17 21:05:18] 2025-10-18 01:04:29,442 | INFO     | -- intersect: -9776352892.717216
[2025-10-17 21:05:18] 2025-10-18 01:04:29,442 | INFO     | intersect: -9776352892.717216
[2025-10-17 21:05:18] 2025-10-18 01:04:29,443 | INFO     | chi2: 0.00011690809587951997
[2025-10-17 21:05:18] 2025-10-18 01:04:29,443 | INFO     | current chi2=0.00011690809587951997 (change=99.0205697429196 %)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,443 | INFO     | sum of square deviations: 257521107.5
[2025-10-17 21:05:18] 2025-10-18 01:04:29,443 | INFO     | sum of deviations: 1409969371.9999998
[2025-10-17 21:05:18] 2025-10-18 01:04:29,443 | INFO     | mean x: 1760746572.5
[2025-10-17 21:05:18] 2025-10-18 01:04:29,444 | INFO     | mean y: 2544137.1276595746
[2025-10-17 21:05:18] 2025-10-18 01:04:29,444 | INFO     | -- intersect: -9637825785.08921
[2025-10-17 21:05:18] 2025-10-18 01:04:29,444 | INFO     | intersect: -9637825785.08921
[2025-10-17 21:05:18] 2025-10-18 01:04:29,444 | INFO     | chi2: 0.00011449680322068011
[2025-10-17 21:05:18] 2025-10-18 01:04:29,444 | INFO     | current chi2=0.00011449680322068011 (change=2.062554043583794 %)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,444 | INFO     | left removable region: 50
[2025-10-17 21:05:18] 2025-10-18 01:04:29,444 | INFO     | sum of square deviations: 77515872.0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,445 | INFO     | sum of deviations: 421851355.9999999
[2025-10-17 21:05:18] 2025-10-18 01:04:29,445 | INFO     | mean x: 1760747152.0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,445 | INFO     | mean y: 2547634.873015873
[2025-10-17 21:05:18] 2025-10-18 01:04:29,445 | INFO     | -- intersect: -9579665071.762573
[2025-10-17 21:05:18] 2025-10-18 01:04:29,445 | INFO     | intersect: -9579665071.762573
[2025-10-17 21:05:18] 2025-10-18 01:04:29,445 | INFO     | chi2: 0.00010324907403784404
[2025-10-17 21:05:18] 2025-10-18 01:04:29,445 | INFO     | -- intersect: -9579665071.762573
[2025-10-17 21:05:18] 2025-10-18 01:04:29,446 | INFO     | current memory leak: 5.44 B/s (using 63 data points, chi2=0.00)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,446 | INFO     | could have reported an average CPU frequency of 2085 MHz (7 samples)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,446 | INFO     | ..............................
[2025-10-17 21:05:18] 2025-10-18 01:04:29,446 | INFO     | . Timing measurements:
[2025-10-17 21:05:18] 2025-10-18 01:04:29,446 | INFO     | . get job = 0 s
[2025-10-17 21:05:18] 2025-10-18 01:04:29,446 | INFO     | . initial setup = 2 s
[2025-10-17 21:05:18] 2025-10-18 01:04:29,446 | INFO     | . payload setup = 8 s
[2025-10-17 21:05:18] 2025-10-18 01:04:29,447 | INFO     | . stage-in = 0 s
[2025-10-17 21:05:18] 2025-10-18 01:04:29,447 | INFO     | . payload execution = 7251 s
[2025-10-17 21:05:18] 2025-10-18 01:04:29,447 | INFO     | . stage-out = 0 s
[2025-10-17 21:05:18] 2025-10-18 01:04:29,447 | INFO     | . log creation = 0 s
[2025-10-17 21:05:18] 2025-10-18 01:04:29,447 | INFO     | ..............................
[2025-10-17 21:05:18] 2025-10-18 01:04:29,531 | INFO     | 
[2025-10-17 21:05:18] 2025-10-18 01:04:29,531 | INFO     | job summary report
[2025-10-17 21:05:18] 2025-10-18 01:04:29,531 | INFO     | --------------------------------------------------
[2025-10-17 21:05:18] 2025-10-18 01:04:29,531 | INFO     | PanDA job id: 6848002619
[2025-10-17 21:05:18] 2025-10-18 01:04:29,531 | INFO     | task id: 46771637
[2025-10-17 21:05:18] 2025-10-18 01:04:29,531 | INFO     | errors: (none)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 21:05:18] 2025-10-18 01:04:29,532 | INFO     | pilot state: finished 
[2025-10-17 21:05:18] 2025-10-18 01:04:29,532 | INFO     | transexitcode: 0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,532 | INFO     | exeerrorcode: 0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,532 | INFO     | exeerrordiag: 
[2025-10-17 21:05:18] 2025-10-18 01:04:29,532 | INFO     | exitcode: 0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,532 | INFO     | exitmsg: OK
[2025-10-17 21:05:18] 2025-10-18 01:04:29,532 | INFO     | cpuconsumptiontime: 54166 s
[2025-10-17 21:05:18] 2025-10-18 01:04:29,532 | INFO     | nevents: 400
[2025-10-17 21:05:18] 2025-10-18 01:04:29,533 | INFO     | neventsw: 0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,533 | INFO     | pid: 27980
[2025-10-17 21:05:18] 2025-10-18 01:04:29,533 | INFO     | pgrp: 27980
[2025-10-17 21:05:18] 2025-10-18 01:04:29,533 | INFO     | corecount: 8
[2025-10-17 21:05:18] 2025-10-18 01:04:29,533 | INFO     | event service: False
[2025-10-17 21:05:18] 2025-10-18 01:04:29,533 | INFO     | sizes: {0: 2348929, 6: 2349191, 11: 2349219, 7262: 2376501, 7265: 2385555, 7272: 2385693}
[2025-10-17 21:05:18] 2025-10-18 01:04:29,533 | INFO     | --------------------------------------------------
[2025-10-17 21:05:18] 2025-10-18 01:04:29,533 | INFO     | 
[2025-10-17 21:05:18] 2025-10-18 01:04:29,533 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-17 21:05:18] 2025-10-18 01:04:29,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,567 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,568 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 21:05:18] 2025-10-18 01:04:29,568 | INFO     | job 6848002619 has completed (purged errors)
[2025-10-17 21:05:18] 2025-10-18 01:04:29,568 | INFO     | overall cleanup function is called
[2025-10-17 21:05:18] 2025-10-18 01:04:30,576 | INFO     | --- collectZombieJob: --- 10, [27980]
[2025-10-17 21:05:18] 2025-10-18 01:04:30,577 | INFO     | zombie collector waiting for pid 27980
[2025-10-17 21:05:18] 2025-10-18 01:04:30,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 21:05:18] 2025-10-18 01:04:30,577 | INFO     | collected zombie processes
[2025-10-17 21:05:18] 2025-10-18 01:04:30,577 | INFO     | will attempt to kill all subprocesses of pid=27980
[2025-10-17 21:05:18] 2025-10-18 01:04:30,666 | INFO     | process IDs to be killed: [27980] (in reverse order)
[2025-10-17 21:05:18] 2025-10-18 01:04:30,720 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 21:05:18] 2025-10-18 01:04:30,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 21:05:18] 2025-10-18 01:04:30,725 | INFO     | did not find any defunct processes belonging to 27980
[2025-10-17 21:05:18] 2025-10-18 01:04:30,728 | INFO     | did not find any defunct processes belonging to 27980
[2025-10-17 21:05:18] 2025-10-18 01:04:30,728 | INFO     | ready for new job
[2025-10-17 21:05:18] 2025-10-18 01:04:30,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 21:05:18] 2025-10-18 01:04:30,730 | INFO     | ***************************************
[2025-10-17 21:05:18] 2025-10-18 01:04:30,730 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 21:05:18] 2025-10-18 01:04:30,730 | INFO     | ***************************************
[2025-10-17 21:05:18] 2025-10-18 01:04:30,730 | INFO     | 
[2025-10-17 21:05:18] 2025-10-18 01:04:30,730 | INFO     | architecture information:
[2025-10-17 21:05:18] 2025-10-18 01:04:30,731 | INFO     | executing command: cat /etc/os-release
[2025-10-17 21:05:18] 2025-10-18 01:04:30,749 | INFO     | cat /etc/os-release:
[2025-10-17 21:05:18] NAME="CentOS Linux"
[2025-10-17 21:05:18] VERSION="7 (Core)"
[2025-10-17 21:05:18] ID="centos"
[2025-10-17 21:05:18] ID_LIKE="rhel fedora"
[2025-10-17 21:05:18] VERSION_ID="7"
[2025-10-17 21:05:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 21:05:18] ANSI_COLOR="0;31"
[2025-10-17 21:05:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 21:05:18] HOME_URL="https://www.centos.org/"
[2025-10-17 21:05:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 21:05:18] 
[2025-10-17 21:05:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 21:05:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 21:05:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 21:05:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 21:05:18] 
[2025-10-17 21:05:18] 2025-10-18 01:04:30,750 | INFO     | ***************************************
[2025-10-17 21:05:18] 2025-10-18 01:04:31,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-17 21:05:18] 2025-10-18 01:04:31,274 | INFO     | sufficient remaining disk space (18559795200 B)
[2025-10-17 21:05:18] 2025-10-18 01:04:31,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 21:05:18] 2025-10-18 01:04:31,275 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 21:05:18] 2025-10-18 01:04:31,275 | INFO     | update_server=False
[2025-10-17 21:05:18] 2025-10-18 01:04:31,275 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 21:05:18] 2025-10-18 01:04:31,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 21:05:18] 2025-10-18 01:04:31,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 21:05:18] 2025-10-18 01:04:31,488 | INFO     | all data control threads have been joined
[2025-10-17 21:05:18] 2025-10-18 01:04:31,580 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-17 21:05:18] 2025-10-18 01:04:31,580 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-17 21:05:18] 2025-10-18 01:04:31,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 21:05:18] 2025-10-18 01:04:31,581 | INFO     | will abort loop
[2025-10-17 21:05:18] 2025-10-18 01:04:32,281 | INFO     | [job] retrieve thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:32,282 | INFO     | [job] queue monitor thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:32,331 | INFO     | [payload] validate_post thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:32,491 | INFO     | [data] control thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:32,586 | INFO     | [job] job monitor thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:32,622 | INFO     | all job control threads have been joined
[2025-10-17 21:05:18] 2025-10-18 01:04:32,652 | INFO     | all payload control threads have been joined
[2025-10-17 21:05:18] 2025-10-18 01:04:32,695 | INFO     | [job] validate thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:33,061 | INFO     | [data] copytool_in thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:33,069 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:33,109 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 21:05:18] 2025-10-18 01:04:33,144 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:33,160 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:33,282 | INFO     | [data] copytool_out thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:33,282 | INFO     | [payload] failed_post thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:33,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:33,625 | INFO     | [job] control thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:33,653 | INFO     | [payload] control thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:04:37,113 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 21:05:18] 2025-10-18 01:05:01,940 | INFO     | PID=20829 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 21:05:18] 2025-10-18 01:05:01,941 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 21:05:18] 2025-10-18 01:05:01,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 21:05:18] 2025-10-18 01:05:01,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 21:05:18] 2025-10-18 01:05:11,838 | INFO     | [monitor] cgroup control has ended
[2025-10-17 21:05:18] 2025-10-18 01:05:12,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139784689735488)>', '<ExcThread(monitor, started 139784223692544)>']
[2025-10-17 21:05:18] 2025-10-18 01:05:12,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 21:05:18] 2025-10-18 01:05:12,995 | INFO     | [monitor] control thread has ended
[2025-10-17 21:05:18] 2025-10-18 01:05:17,706 | INFO     | all workflow threads have been joined
[2025-10-17 21:05:18] 2025-10-18 01:05:17,706 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 21:05:18] 2025-10-18 01:05:17,710 | INFO     | traces error code: 0
[2025-10-17 21:05:18] 2025-10-18 01:05:17,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 21:05:18] 2025-10-18 01:05:17,827 [wrapper] ==== pilot stdout END ====
[2025-10-17 21:05:18] 2025-10-18 01:05:17,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 21:05:18] 2025-10-18 01:05:17,836 [wrapper] pilotpid: 20829
[2025-10-17 21:05:18] 2025-10-18 01:05:17,841 [wrapper] Pilot exit status: 0
[2025-10-17 21:05:18] 2025-10-18 01:05:17,860 [wrapper] pandaids: 6848002619
[2025-10-17 21:05:18] 2025-10-18 01:05:17,911 [wrapper] cleanup supervisor_pilot   762 20830
[2025-10-17 21:05:18] 2025-10-18 01:05:17,915 [wrapper] Test setup, not cleaning
[2025-10-17 21:05:18] 2025-10-18 01:05:17,920 [wrapper] apfmon messages muted
[2025-10-17 21:05:18] 2025-10-18 01:05:17,925 [wrapper] ==== wrapper stdout END ====
[2025-10-17 21:05:18] 2025-10-18 01:05:17,930 [wrapper] ==== wrapper stderr END ====
[2025-10-17 21:05:18]  *** Error codes and diagnostics ***
[2025-10-17 21:05:18]     "exeErrorCode": 0,
[2025-10-17 21:05:18]     "exeErrorDiag": "",
[2025-10-17 21:05:18]     "pilotErrorCode": 0,
[2025-10-17 21:05:18]     "pilotErrorDiag": "",
[2025-10-17 21:05:18]  *** Listing of results directory ***
[2025-10-17 21:05:18] total 431056
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas    557409 Oct 17 13:20 pilot3.tar.gz
[2025-10-17 21:05:18] -rwx------ 1 boincer umatlas     36292 Oct 17 13:26 runpilot2-wrapper.sh
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas      5112 Oct 17 13:26 queuedata.json
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas       100 Oct 17 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 21:05:18] -rwxr-xr-x 1 boincer umatlas      7986 Oct 17 19:02 run_atlas
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas       105 Oct 17 19:02 job.xml
[2025-10-17 21:05:18] -rw-r--r-- 2 boincer umatlas 228591006 Oct 17 19:02 EVNT.46771634._001326.pool.root.1
[2025-10-17 21:05:18] -rw-r--r-- 2 boincer umatlas     15120 Oct 17 19:02 start_atlas.sh
[2025-10-17 21:05:18] drwxrwx--x 2 boincer umatlas      4096 Oct 17 19:02 shared
[2025-10-17 21:05:18] -rw-r--r-- 2 boincer umatlas    569675 Oct 17 19:02 input.tar.gz
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas         0 Oct 17 19:02 boinc_lockfile
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas      2558 Oct 17 19:02 pandaJob.out
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas    976741 Oct 17 19:02 agis_schedconf.cvmfs.json
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas   1560740 Oct 17 19:02 agis_ddmendpoints.agis.ALL.json
[2025-10-17 21:05:18] drwx------ 5 boincer umatlas      4096 Oct 17 19:03 pilot3
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas      5909 Oct 17 21:00 init_data.xml
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas 206147246 Oct 17 21:03 HITS.46771637._029609.pool.root.1
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas       529 Oct 17 21:04 boinc_task_state.xml
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas      1050 Oct 17 21:04 memory_monitor_summary.json
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas    351201 Oct 17 21:04 log.46771637._029609.job.log.tgz.1
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas      7842 Oct 17 21:04 heartbeat.json
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas        95 Oct 17 21:05 pilot_heartbeat.json
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas      8192 Oct 17 21:05 boinc_mmap_file
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas        27 Oct 17 21:05 wrapper_checkpoint.txt
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas      4932 Oct 17 21:05 pilotlog.txt
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas   1028065 Oct 17 21:05 log.46771637._029609.job.log.1
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas       357 Oct 17 21:05 output.list
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas       620 Oct 17 21:05 runtime_log
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas   1402880 Oct 17 21:05 result.tar.gz
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas       659 Oct 17 21:05 66RKDmoO3T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1MuNDm214YFm.diag
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas      8703 Oct 17 21:05 runtime_log.err
[2025-10-17 21:05:18] -rw-r--r-- 1 boincer umatlas     20918 Oct 17 21:05 stderr.txt
[2025-10-17 21:05:18] HITS file was successfully produced:
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas 206147246 Oct 17 21:03 shared/HITS.pool.root.1
[2025-10-17 21:05:18]  *** Contents of shared directory: ***
[2025-10-17 21:05:18] total 426504
[2025-10-17 21:05:18] -rw-r--r-- 2 boincer umatlas 228591006 Oct 17 19:02 ATLAS.root_0
[2025-10-17 21:05:18] -rw-r--r-- 2 boincer umatlas     15120 Oct 17 19:02 start_atlas.sh
[2025-10-17 21:05:18] -rw-r--r-- 2 boincer umatlas    569675 Oct 17 19:02 input.tar.gz
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas 206147246 Oct 17 21:03 HITS.pool.root.1
[2025-10-17 21:05:18] -rw------- 1 boincer umatlas   1402880 Oct 17 21:05 result.tar.gz
21:05:19 (17161): run_atlas exited; CPU time 54177.501054
21:05:19 (17161): called boinc_finish(0)

</stderr_txt>
]]>

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