Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:04:02 (28148): wrapper (7.7.26015): starting
18:04:02 (28148): wrapper: running run_atlas (--nthreads 4)
[2025-10-17 18:04:02] Arguments: --nthreads 4
[2025-10-17 18:04:02] Threads: 4
[2025-10-17 18:04:02] Checking for CVMFS
[2025-10-17 18:04:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 18:04:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 18:04:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 18:04:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 18:04:02] 2.11.2.0 2765 10222 78608 151829 2 58 17225055 20275201 1 130560 0 6012110 99.971 657022 38388 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-17 18:04:02] CVMFS is ok
[2025-10-17 18:04:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 18:04:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 18:04:02] Further information can be found at the LHC@home message board.
[2025-10-17 18:04:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 18:04:02] Checking for apptainer binary...
[2025-10-17 18:04:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 18:04:02] Running /usr/bin/apptainer --version
[2025-10-17 18:04:02] apptainer version 1.3.2-1.el7
[2025-10-17 18:04:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 18:04:03] c-204-21.aglt2.org
[2025-10-17 18:04:03] apptainer works
[2025-10-17 18:04:03] Set ATHENA_PROC_NUMBER=4
[2025-10-17 18:04:03] Set ATHENA_CORE_NUMBER=4
[2025-10-17 18:04:03] Starting ATLAS job with PandaID=6848006730
[2025-10-17 18:04:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:49:56 (12766): wrapper (7.7.26015): starting
20:49:56 (12766): wrapper: running run_atlas (--nthreads 8)
[2025-10-17 20:49:56] Arguments: --nthreads 8
[2025-10-17 20:49:56] Threads: 8
[2025-10-17 20:49:56] This job has been restarted, cleaning up previous attempt
[2025-10-17 20:49:56] Checking for CVMFS
[2025-10-17 20:49:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 20:49:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 20:49:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 20:49:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 20:49:56] 2.11.2.0 2765 10388 78392 151833 1 39 17389630 20275201 1 130560 0 6101091 99.971 662295 38420 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-17 20:49:56] CVMFS is ok
[2025-10-17 20:49:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 20:49:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 20:49:56] Further information can be found at the LHC@home message board.
[2025-10-17 20:49:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 20:49:56] Checking for apptainer binary...
[2025-10-17 20:49:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 20:49:56] Running /usr/bin/apptainer --version
[2025-10-17 20:49:56] apptainer version 1.3.2-1.el7
[2025-10-17 20:49:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 20:49:58] c-204-21.aglt2.org
[2025-10-17 20:49:58] apptainer works
[2025-10-17 20:49:58] Set ATHENA_PROC_NUMBER=8
[2025-10-17 20:49:58] Set ATHENA_CORE_NUMBER=8
[2025-10-17 20:49:58] Starting ATLAS job with PandaID=6848006730
[2025-10-17 20:49:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 23:08:34]  *** The last 200 lines of the pilot log: ***
[2025-10-17 23:08:34] 2025-10-18 03:07:43,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 23:08:34] 2025-10-18 03:07:43,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 23:08:34] 2025-10-18 03:07:43,522 | INFO     | fitting pss+swap vs Time
[2025-10-17 23:08:34] 2025-10-18 03:07:43,522 | INFO     | sum of square deviations: 762879420.0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,523 | INFO     | sum of deviations: -3472246818.999998
[2025-10-17 23:08:34] 2025-10-18 03:07:43,523 | INFO     | mean x: 1760752734.0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,523 | INFO     | mean y: 2487018.422222222
[2025-10-17 23:08:34] 2025-10-18 03:07:43,523 | INFO     | -- intersect: 8016555715.775534
[2025-10-17 23:08:34] 2025-10-18 03:07:43,523 | INFO     | intersect: 8016555715.775534
[2025-10-17 23:08:34] 2025-10-18 03:07:43,523 | INFO     | chi2: 2.4491942716362516
[2025-10-17 23:08:34] 2025-10-18 03:07:43,524 | INFO     | sum of square deviations: 681212772.5
[2025-10-17 23:08:34] 2025-10-18 03:07:43,524 | INFO     | sum of deviations: 5961549885.999998
[2025-10-17 23:08:34] 2025-10-18 03:07:43,525 | INFO     | mean x: 1760752581.5
[2025-10-17 23:08:34] 2025-10-18 03:07:43,525 | INFO     | mean y: 2504104.4
[2025-10-17 23:08:34] 2025-10-18 03:07:43,525 | INFO     | -- intersect: -15406505789.811176
[2025-10-17 23:08:34] 2025-10-18 03:07:43,525 | INFO     | intersect: -15406505789.811176
[2025-10-17 23:08:34] 2025-10-18 03:07:43,525 | INFO     | chi2: 1.5859444219988688
[2025-10-17 23:08:34] 2025-10-18 03:07:43,525 | INFO     | current chi2=1.5859444219988688 (change=35.24627913900293 %)
[2025-10-17 23:08:34] 2025-10-18 03:07:43,526 | INFO     | sum of square deviations: 605592750.0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,526 | INFO     | sum of deviations: 5777001706.000002
[2025-10-17 23:08:34] 2025-10-18 03:07:43,526 | INFO     | mean x: 1760752429.0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,526 | INFO     | mean y: 2503733.456
[2025-10-17 23:08:34] 2025-10-18 03:07:43,527 | INFO     | -- intersect: -16794047721.588081
[2025-10-17 23:08:34] 2025-10-18 03:07:43,527 | INFO     | intersect: -16794047721.588081
[2025-10-17 23:08:34] 2025-10-18 03:07:43,527 | INFO     | chi2: 1.587787105497938
[2025-10-17 23:08:34] 2025-10-18 03:07:43,527 | INFO     | current chi2=1.587787105497938 (change=-0.11618840316905861 %)
[2025-10-17 23:08:34] 2025-10-18 03:07:43,527 | INFO     | right removable region: 124
[2025-10-17 23:08:34] 2025-10-18 03:07:43,527 | INFO     | sum of square deviations: 681212772.5
[2025-10-17 23:08:34] 2025-10-18 03:07:43,528 | INFO     | sum of deviations: -23140667505.0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,528 | INFO     | mean x: 1760752886.5
[2025-10-17 23:08:34] 2025-10-18 03:07:43,528 | INFO     | mean y: 2523089.707692308
[2025-10-17 23:08:34] 2025-10-18 03:07:43,528 | INFO     | -- intersect: 59814961654.877884
[2025-10-17 23:08:34] 2025-10-18 03:07:43,529 | INFO     | intersect: 59814961654.877884
[2025-10-17 23:08:34] 2025-10-18 03:07:43,529 | INFO     | chi2: 1.0180736695967378
[2025-10-17 23:08:34] 2025-10-18 03:07:43,529 | INFO     | current chi2=1.0180736695967378 (change=58.43230235400699 %)
[2025-10-17 23:08:34] 2025-10-18 03:07:43,529 | INFO     | sum of square deviations: 605592750.0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,530 | INFO     | sum of deviations: -20411639806.0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,530 | INFO     | mean x: 1760753039.0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,530 | INFO     | mean y: 2517497.856
[2025-10-17 23:08:34] 2025-10-18 03:07:43,530 | INFO     | -- intersect: 59349094581.8582
[2025-10-17 23:08:34] 2025-10-18 03:07:43,530 | INFO     | intersect: 59349094581.8582
[2025-10-17 23:08:34] 2025-10-18 03:07:43,531 | INFO     | chi2: 1.0063602232560704
[2025-10-17 23:08:34] 2025-10-18 03:07:43,531 | INFO     | current chi2=1.0063602232560704 (change=1.1505499739824459 %)
[2025-10-17 23:08:34] 2025-10-18 03:07:43,531 | INFO     | left removable region: 20
[2025-10-17 23:08:34] 2025-10-18 03:07:43,531 | INFO     | sum of square deviations: 348769330.0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,532 | INFO     | sum of deviations: -2550341649.5
[2025-10-17 23:08:34] 2025-10-18 03:07:43,532 | INFO     | mean x: 1760753008.5
[2025-10-17 23:08:34] 2025-10-18 03:07:43,532 | INFO     | mean y: 2516404.9326923075
[2025-10-17 23:08:34] 2025-10-18 03:07:43,532 | INFO     | -- intersect: 12877850747.14672
[2025-10-17 23:08:34] 2025-10-18 03:07:43,532 | INFO     | intersect: 12877850747.14672
[2025-10-17 23:08:34] 2025-10-18 03:07:43,532 | INFO     | chi2: 0.04570198985065854
[2025-10-17 23:08:34] 2025-10-18 03:07:43,532 | INFO     | -- intersect: 12877850747.14672
[2025-10-17 23:08:34] 2025-10-18 03:07:43,533 | INFO     | current memory leak: -7.31 B/s (using 104 data points, chi2=0.05)
[2025-10-17 23:08:34] 2025-10-18 03:07:43,533 | INFO     | could have reported an average CPU frequency of 1987 MHz (8 samples)
[2025-10-17 23:08:34] 2025-10-18 03:07:43,533 | INFO     | ..............................
[2025-10-17 23:08:34] 2025-10-18 03:07:43,533 | INFO     | . Timing measurements:
[2025-10-17 23:08:34] 2025-10-18 03:07:43,533 | INFO     | . get job = 0 s
[2025-10-17 23:08:34] 2025-10-18 03:07:43,533 | INFO     | . initial setup = 1 s
[2025-10-17 23:08:34] 2025-10-18 03:07:43,534 | INFO     | . payload setup = 8 s
[2025-10-17 23:08:34] 2025-10-18 03:07:43,534 | INFO     | . stage-in = 0 s
[2025-10-17 23:08:34] 2025-10-18 03:07:43,534 | INFO     | . payload execution = 8208 s
[2025-10-17 23:08:34] 2025-10-18 03:07:43,534 | INFO     | . stage-out = 2 s
[2025-10-17 23:08:34] 2025-10-18 03:07:43,534 | INFO     | . log creation = 0 s
[2025-10-17 23:08:34] 2025-10-18 03:07:43,534 | INFO     | ..............................
[2025-10-17 23:08:34] 2025-10-18 03:07:43,624 | INFO     | 
[2025-10-17 23:08:34] 2025-10-18 03:07:43,624 | INFO     | job summary report
[2025-10-17 23:08:34] 2025-10-18 03:07:43,624 | INFO     | --------------------------------------------------
[2025-10-17 23:08:34] 2025-10-18 03:07:43,624 | INFO     | PanDA job id: 6848006730
[2025-10-17 23:08:34] 2025-10-18 03:07:43,624 | INFO     | task id: 46771637
[2025-10-17 23:08:34] 2025-10-18 03:07:43,625 | INFO     | errors: (none)
[2025-10-17 23:08:34] 2025-10-18 03:07:43,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 23:08:34] 2025-10-18 03:07:43,625 | INFO     | pilot state: finished 
[2025-10-17 23:08:34] 2025-10-18 03:07:43,625 | INFO     | transexitcode: 0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,625 | INFO     | exeerrorcode: 0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,625 | INFO     | exeerrordiag: 
[2025-10-17 23:08:34] 2025-10-18 03:07:43,626 | INFO     | exitcode: 0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,626 | INFO     | exitmsg: OK
[2025-10-17 23:08:34] 2025-10-18 03:07:43,626 | INFO     | cpuconsumptiontime: 60919 s
[2025-10-17 23:08:34] 2025-10-18 03:07:43,626 | INFO     | nevents: 400
[2025-10-17 23:08:34] 2025-10-18 03:07:43,626 | INFO     | neventsw: 0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,626 | INFO     | pid: 23894
[2025-10-17 23:08:34] 2025-10-18 03:07:43,627 | INFO     | pgrp: 23894
[2025-10-17 23:08:34] 2025-10-18 03:07:43,627 | INFO     | corecount: 8
[2025-10-17 23:08:34] 2025-10-18 03:07:43,627 | INFO     | event service: False
[2025-10-17 23:08:34] 2025-10-18 03:07:43,627 | INFO     | sizes: {0: 2348752, 1: 2348951, 7: 2349213, 12: 2349241, 8221: 2377008, 8225: 2386006, 8226: 2386190, 8232: 2386384}
[2025-10-17 23:08:34] 2025-10-18 03:07:43,627 | INFO     | --------------------------------------------------
[2025-10-17 23:08:34] 2025-10-18 03:07:43,627 | INFO     | 
[2025-10-17 23:08:34] 2025-10-18 03:07:43,628 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-17 23:08:34] 2025-10-18 03:07:43,655 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,656 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,656 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,656 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,657 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,657 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,657 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,657 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,659 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 23:08:34] 2025-10-18 03:07:43,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,659 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 23:08:34] 2025-10-18 03:07:43,660 | INFO     | job 6848006730 has completed (purged errors)
[2025-10-17 23:08:34] 2025-10-18 03:07:43,660 | INFO     | overall cleanup function is called
[2025-10-17 23:08:34] 2025-10-18 03:07:44,668 | INFO     | --- collectZombieJob: --- 10, [23894]
[2025-10-17 23:08:34] 2025-10-18 03:07:44,669 | INFO     | zombie collector waiting for pid 23894
[2025-10-17 23:08:34] 2025-10-18 03:07:44,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 23:08:34] 2025-10-18 03:07:44,669 | INFO     | collected zombie processes
[2025-10-17 23:08:34] 2025-10-18 03:07:44,669 | INFO     | will attempt to kill all subprocesses of pid=23894
[2025-10-17 23:08:34] 2025-10-18 03:07:44,759 | INFO     | process IDs to be killed: [23894] (in reverse order)
[2025-10-17 23:08:34] 2025-10-18 03:07:44,821 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 23:08:34] 2025-10-18 03:07:44,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 23:08:34] 2025-10-18 03:07:44,824 | INFO     | did not find any defunct processes belonging to 23894
[2025-10-17 23:08:34] 2025-10-18 03:07:44,827 | INFO     | did not find any defunct processes belonging to 23894
[2025-10-17 23:08:34] 2025-10-18 03:07:44,828 | INFO     | ready for new job
[2025-10-17 23:08:34] 2025-10-18 03:07:44,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 23:08:34] 2025-10-18 03:07:44,830 | INFO     | ***************************************
[2025-10-17 23:08:34] 2025-10-18 03:07:44,830 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 23:08:34] 2025-10-18 03:07:44,830 | INFO     | ***************************************
[2025-10-17 23:08:34] 2025-10-18 03:07:44,830 | INFO     | 
[2025-10-17 23:08:34] 2025-10-18 03:07:44,831 | INFO     | architecture information:
[2025-10-17 23:08:34] 2025-10-18 03:07:44,832 | INFO     | executing command: cat /etc/os-release
[2025-10-17 23:08:34] 2025-10-18 03:07:44,849 | INFO     | cat /etc/os-release:
[2025-10-17 23:08:34] NAME="CentOS Linux"
[2025-10-17 23:08:34] VERSION="7 (Core)"
[2025-10-17 23:08:34] ID="centos"
[2025-10-17 23:08:34] ID_LIKE="rhel fedora"
[2025-10-17 23:08:34] VERSION_ID="7"
[2025-10-17 23:08:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 23:08:34] ANSI_COLOR="0;31"
[2025-10-17 23:08:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 23:08:34] HOME_URL="https://www.centos.org/"
[2025-10-17 23:08:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 23:08:34] 
[2025-10-17 23:08:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 23:08:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 23:08:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 23:08:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 23:08:34] 
[2025-10-17 23:08:34] 2025-10-18 03:07:44,850 | INFO     | ***************************************
[2025-10-17 23:08:34] 2025-10-18 03:07:45,353 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-17 23:08:34] 2025-10-18 03:07:45,372 | INFO     | sufficient remaining disk space (18526240768 B)
[2025-10-17 23:08:34] 2025-10-18 03:07:45,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 23:08:34] 2025-10-18 03:07:45,373 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 23:08:34] 2025-10-18 03:07:45,373 | INFO     | update_server=False
[2025-10-17 23:08:34] 2025-10-18 03:07:45,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 23:08:34] 2025-10-18 03:07:45,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 23:08:34] 2025-10-18 03:07:45,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 23:08:34] 2025-10-18 03:07:45,403 | INFO     | all payload control threads have been joined
[2025-10-17 23:08:34] 2025-10-18 03:07:45,822 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-17 23:08:34] 2025-10-18 03:07:45,823 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-17 23:08:34] 2025-10-18 03:07:45,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 23:08:34] 2025-10-18 03:07:45,823 | INFO     | will abort loop
[2025-10-17 23:08:34] 2025-10-18 03:07:46,124 | INFO     | all data control threads have been joined
[2025-10-17 23:08:34] 2025-10-18 03:07:46,375 | INFO     | [job] retrieve thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:46,380 | INFO     | [job] queue monitor thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:46,409 | INFO     | [payload] control thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:46,671 | INFO     | all job control threads have been joined
[2025-10-17 23:08:34] 2025-10-18 03:07:46,829 | INFO     | [job] job monitor thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:46,849 | INFO     | [payload] validate_post thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:46,915 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:46,920 | INFO     | [job] validate thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:47,130 | INFO     | [data] control thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:47,155 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:47,366 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:47,380 | INFO     | [data] copytool_out thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:47,380 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:47,407 | INFO     | [data] copytool_in thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:47,676 | INFO     | [job] control thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:47,860 | INFO     | [payload] failed_post thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:07:48,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 23:08:34] 2025-10-18 03:07:52,345 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 23:08:34] 2025-10-18 03:08:15,269 | INFO     | PID=17535 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 23:08:34] 2025-10-18 03:08:15,281 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 23:08:34] 2025-10-18 03:08:15,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 23:08:34] 2025-10-18 03:08:15,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 23:08:34] 2025-10-18 03:08:27,856 | INFO     | [monitor] cgroup control has ended
[2025-10-17 23:08:34] 2025-10-18 03:08:28,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932175968064)>', '<ExcThread(monitor, started 139931863193344)>']
[2025-10-17 23:08:34] 2025-10-18 03:08:29,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 23:08:34] 2025-10-18 03:08:29,352 | INFO     | [monitor] control thread has ended
[2025-10-17 23:08:34] 2025-10-18 03:08:33,888 | INFO     | all workflow threads have been joined
[2025-10-17 23:08:34] 2025-10-18 03:08:33,888 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 23:08:34] 2025-10-18 03:08:33,888 | INFO     | traces error code: 0
[2025-10-17 23:08:34] 2025-10-18 03:08:33,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 23:08:34] 2025-10-18 03:08:34,003 [wrapper] ==== pilot stdout END ====
[2025-10-17 23:08:34] 2025-10-18 03:08:34,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 23:08:34] 2025-10-18 03:08:34,013 [wrapper] pilotpid: 17535
[2025-10-17 23:08:34] 2025-10-18 03:08:34,018 [wrapper] Pilot exit status: 0
[2025-10-17 23:08:34] 2025-10-18 03:08:34,038 [wrapper] pandaids: 6848006730 6848006730
[2025-10-17 23:08:34] 2025-10-18 03:08:34,089 [wrapper] cleanup supervisor_pilot 21919 17536
[2025-10-17 23:08:34] 2025-10-18 03:08:34,093 [wrapper] Test setup, not cleaning
[2025-10-17 23:08:34] 2025-10-18 03:08:34,098 [wrapper] apfmon messages muted
[2025-10-17 23:08:34] 2025-10-18 03:08:34,103 [wrapper] ==== wrapper stdout END ====
[2025-10-17 23:08:34] 2025-10-18 03:08:34,109 [wrapper] ==== wrapper stderr END ====
[2025-10-17 23:08:34]  *** Error codes and diagnostics ***
[2025-10-17 23:08:34]     "exeErrorCode": 0,
[2025-10-17 23:08:34]     "exeErrorDiag": "",
[2025-10-17 23:08:34]     "pilotErrorCode": 0,
[2025-10-17 23:08:34]     "pilotErrorDiag": "",
[2025-10-17 23:08:34]  *** Listing of results directory ***
[2025-10-17 23:08:34] total 655220
[2025-10-17 23:08:34] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas      5112 Oct 17 16:18 queuedata.json
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas    557409 Oct 17 16:20 pilot3.tar.gz
[2025-10-17 23:08:34] -rwx------ 1 boincer umatlas     36292 Oct 17 16:20 runpilot2-wrapper.sh
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas       100 Oct 17 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 23:08:34] -rwxr-xr-x 1 boincer umatlas      7986 Oct 17 18:04 run_atlas
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas       105 Oct 17 18:04 job.xml
[2025-10-17 23:08:34] -rw-r--r-- 3 boincer umatlas 228021816 Oct 17 18:04 EVNT.46771634._001383.pool.root.1
[2025-10-17 23:08:34] -rw-r--r-- 3 boincer umatlas 228021816 Oct 17 18:04 ATLAS.root_0
[2025-10-17 23:08:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 17 18:04 start_atlas.sh
[2025-10-17 23:08:34] drwxrwx--x 2 boincer umatlas      4096 Oct 17 18:04 shared
[2025-10-17 23:08:34] -rw-r--r-- 2 boincer umatlas    569680 Oct 17 18:04 input.tar.gz
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas         0 Oct 17 18:04 boinc_lockfile
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas      2555 Oct 17 20:49 pandaJob.out
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas    976749 Oct 17 20:50 agis_schedconf.cvmfs.json
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas      5911 Oct 17 23:01 init_data.xml
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas 207963818 Oct 17 23:06 HITS.46771637._031005.pool.root.1
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas       531 Oct 17 23:07 boinc_task_state.xml
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas      1062 Oct 17 23:07 memory_monitor_summary.json
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas   1560740 Oct 17 23:07 agis_ddmendpoints.agis.ALL.json
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas    362845 Oct 17 23:07 log.46771637._031005.job.log.tgz.1
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas      7839 Oct 17 23:07 heartbeat.json
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas        28 Oct 17 23:08 wrapper_checkpoint.txt
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas      8192 Oct 17 23:08 boinc_mmap_file
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas        96 Oct 17 23:08 pilot_heartbeat.json
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas      4932 Oct 17 23:08 pilotlog.txt
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas   1154792 Oct 17 23:08 log.46771637._031005.job.log.1
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas       357 Oct 17 23:08 output.list
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas       620 Oct 17 23:08 runtime_log
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas   1536000 Oct 17 23:08 result.tar.gz
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas      8788 Oct 17 23:08 runtime_log.err
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas       786 Oct 17 23:08 5UDMDms65T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDminuNDmsPDH5m.diag
[2025-10-17 23:08:34] -rw-r--r-- 1 boincer umatlas     23011 Oct 17 23:08 stderr.txt
[2025-10-17 23:08:34] HITS file was successfully produced:
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas 207963818 Oct 17 23:06 shared/HITS.pool.root.1
[2025-10-17 23:08:34]  *** Contents of shared directory: ***
[2025-10-17 23:08:34] total 427852
[2025-10-17 23:08:34] -rw-r--r-- 3 boincer umatlas 228021816 Oct 17 18:04 ATLAS.root_0
[2025-10-17 23:08:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 17 18:04 start_atlas.sh
[2025-10-17 23:08:34] -rw-r--r-- 2 boincer umatlas    569680 Oct 17 18:04 input.tar.gz
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas 207963818 Oct 17 23:06 HITS.pool.root.1
[2025-10-17 23:08:34] -rw------- 1 boincer umatlas   1536000 Oct 17 23:08 result.tar.gz
23:08:36 (12766): run_atlas exited; CPU time 60861.453139
23:08:36 (12766): called boinc_finish(0)

</stderr_txt>
]]>

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