Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:06:04 (1304884): wrapper (7.7.26015): starting
10:06:04 (1304884): wrapper: running run_atlas (--nthreads 3)
[2025-10-18 10:06:04] Arguments: --nthreads 3
[2025-10-18 10:06:04] Threads: 3
[2025-10-18 10:06:04] Checking for CVMFS
[2025-10-18 10:06:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 10:06:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 10:06:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 10:06:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 10:06:05] 2.9.2.0 436543 3176 68516 151843 3 57 29807169 36864001 0 130560 0 2269939 99.989 118329 3088 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 10:06:05] CVMFS is ok
[2025-10-18 10:06:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 10:06:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 10:06:05] Further information can be found at the LHC@home message board.
[2025-10-18 10:06:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 10:06:05] Checking for apptainer binary...
[2025-10-18 10:06:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 10:06:05] Running /usr/bin/apptainer --version
[2025-10-18 10:06:05] apptainer version 1.4.1-1.1
[2025-10-18 10:06:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 10:06:05] cosA133a
[2025-10-18 10:06:05] apptainer works
[2025-10-18 10:06:05] Set ATHENA_PROC_NUMBER=3
[2025-10-18 10:06:05] Set ATHENA_CORE_NUMBER=3
[2025-10-18 10:06:05] Starting ATLAS job with PandaID=6848001908
[2025-10-18 10:06:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 11:44:30]  *** The last 200 lines of the pilot log: ***
[2025-10-18 11:44:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-18 11:44:30]  replicas=None
[2025-10-18 11:44:30]  scope=mc23_13p6TeV
[2025-10-18 11:44:30]  status=None
[2025-10-18 11:44:30]  status_code=0
[2025-10-18 11:44:30]  storage_token=
[2025-10-18 11:44:30]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6848001908/log.46771637._029488.job.log.tgz.1
[2025-10-18 11:44:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/c5/log.46771637._029488.job.log.tgz.1
[2025-10-18 11:44:30]  workdir=None
[2025-10-18 11:44:30] ]
[2025-10-18 11:44:30] 2025-10-18 09:43:35,403 | INFO     | transferring file log.46771637._029488.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6848001908/log.46771637._029488.job.log.tgz.1 to /local/data/boinc/
[2025-10-18 11:44:30] 2025-10-18 09:43:35,403 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6848001908/log.46771637._029488.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._0294
[2025-10-18 11:44:30] 2025-10-18 09:43:35,415 | INFO     | adding to output.list: log.46771637._029488.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/c5/log.46771637._029488.job.log.tg
[2025-10-18 11:44:30] 2025-10-18 09:43:35,415 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 11:44:30] 2025-10-18 09:43:35,415 | INFO     | summary of transferred files:
[2025-10-18 11:44:30] 2025-10-18 09:43:35,415 | INFO     |  -- lfn=log.46771637._029488.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 11:44:30] 2025-10-18 09:43:35,415 | INFO     | stage-out finished correctly
[2025-10-18 11:44:30] 2025-10-18 09:43:36,260 | INFO     | time since job start (5841s) is within the limit (172800.0s)
[2025-10-18 11:44:30] 2025-10-18 09:43:37,206 | INFO     | monitor loop #449: job 0:6848001908 is in state 'finished'
[2025-10-18 11:44:30] 2025-10-18 09:43:37,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 11:44:30] 2025-10-18 09:43:37,649 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 11:44:30] 2025-10-18 09:43:37,679 | INFO     | job 6848001908 has state=finished
[2025-10-18 11:44:30] 2025-10-18 09:43:37,679 | INFO     | preparing for final server update for job 6848001908 in state='finished'
[2025-10-18 11:44:30] 2025-10-18 09:43:37,679 | INFO     | this job has now completed (state=finished)
[2025-10-18 11:44:30] 2025-10-18 09:43:37,679 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 11:44:30] 2025-10-18 09:43:37,679 | INFO     | log transfer has been attempted: DONE
[2025-10-18 11:44:30] 2025-10-18 09:43:37,679 | INFO     | job 6848001908 has finished - writing final server update
[2025-10-18 11:44:30] 2025-10-18 09:43:37,679 | INFO     | total number of processed events: 400 (read)
[2025-10-18 11:44:30] 2025-10-18 09:43:37,680 | INFO     | executing command: lscpu
[2025-10-18 11:44:30] 2025-10-18 09:43:37,692 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 11:44:30] 2025-10-18 09:43:38,268 | INFO     | time since job start (5843s) is within the limit (172800.0s)
[2025-10-18 11:44:30] 2025-10-18 09:43:39,710 | INFO     | monitor loop #450: job 0:6848001908 is in state 'finished'
[2025-10-18 11:44:30] 2025-10-18 09:43:39,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 11:44:30] 2025-10-18 09:43:40,274 | INFO     | time since job start (5845s) is within the limit (172800.0s)
[2025-10-18 11:44:30] 2025-10-18 09:43:42,215 | INFO     | monitor loop #451: job 0:6848001908 is in state 'finished'
[2025-10-18 11:44:30] 2025-10-18 09:43:42,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 11:44:30] 2025-10-18 09:43:42,280 | INFO     | time since job start (5847s) is within the limit (172800.0s)
[2025-10-18 11:44:30] 2025-10-18 09:43:43,503 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-18 11:44:30] 2025-10-18 09:43:43,504 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4324.55875
[2025-10-18 11:44:30] 2025-10-18 09:43:43,505 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6848001908/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 11:44:30] 2025-10-18 09:43:43,505 | INFO     | extracted standard info from prmon json
[2025-10-18 11:44:30] 2025-10-18 09:43:43,505 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 11:44:30] 2025-10-18 09:43:43,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 11:44:30] 2025-10-18 09:43:43,506 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 11:44:30] 2025-10-18 09:43:43,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 11:44:30] 2025-10-18 09:43:43,506 | INFO     | fitting pss+swap vs Time
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | sum of square deviations: 218571540.0
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | sum of deviations: -478209926.9999999
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | mean x: 1760777790.0
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | mean y: 2364356.786516854
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | -- intersect: 3854747967.2928123
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | intersect: 3854747967.2928123
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | chi2: 0.0206605550335616
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | -- intersect: 3854747967.2928123
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | current memory leak: -2.19 B/s (using 89 data points, chi2=0.02)
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | could have reported an average CPU frequency of 4322 MHz (7 samples)
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | ..............................
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | . Timing measurements:
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | . get job = 0 s
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | . initial setup = 1 s
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | . payload setup = 6 s
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | . stage-in = 0 s
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | . payload execution = 5812 s
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | . stage-out = 0 s
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | . log creation = 0 s
[2025-10-18 11:44:30] 2025-10-18 09:43:43,507 | INFO     | ..............................
[2025-10-18 11:44:30] 2025-10-18 09:43:43,538 | INFO     | 
[2025-10-18 11:44:30] 2025-10-18 09:43:43,538 | INFO     | job summary report
[2025-10-18 11:44:30] 2025-10-18 09:43:43,538 | INFO     | --------------------------------------------------
[2025-10-18 11:44:30] 2025-10-18 09:43:43,538 | INFO     | PanDA job id: 6848001908
[2025-10-18 11:44:30] 2025-10-18 09:43:43,538 | INFO     | task id: 46771637
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | errors: (none)
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | pilot state: finished 
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | transexitcode: 0
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | exeerrorcode: 0
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | exeerrordiag: 
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | exitcode: 0
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | exitmsg: OK
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | cpuconsumptiontime: 16806 s
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | nevents: 400
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | neventsw: 0
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | pid: 1315054
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | pgrp: 1315054
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | corecount: 3
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | event service: False
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | sizes: {0: 2348932, 6: 2349194, 11: 2349222, 5821: 2376039, 5822: 2376038, 5823: 2385098, 5825: 2385282, 5831: 2385476}
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | --------------------------------------------------
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | 
[2025-10-18 11:44:30] 2025-10-18 09:43:43,539 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 11:44:30] 2025-10-18 09:43:43,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 11:44:30] 2025-10-18 09:43:43,552 | INFO     | job 6848001908 has completed (purged errors)
[2025-10-18 11:44:30] 2025-10-18 09:43:43,552 | INFO     | overall cleanup function is called
[2025-10-18 11:44:30] 2025-10-18 09:43:44,558 | INFO     | --- collectZombieJob: --- 10, [1315054]
[2025-10-18 11:44:30] 2025-10-18 09:43:44,559 | INFO     | zombie collector waiting for pid 1315054
[2025-10-18 11:44:30] 2025-10-18 09:43:44,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 11:44:30] 2025-10-18 09:43:44,559 | INFO     | collected zombie processes
[2025-10-18 11:44:30] 2025-10-18 09:43:44,559 | INFO     | will attempt to kill all subprocesses of pid=1315054
[2025-10-18 11:44:30] 2025-10-18 09:43:44,597 | INFO     | process IDs to be killed: [1315054] (in reverse order)
[2025-10-18 11:44:30] 2025-10-18 09:43:44,622 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 11:44:30] 2025-10-18 09:43:44,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 11:44:30] 2025-10-18 09:43:44,624 | INFO     | did not find any defunct processes belonging to 1315054
[2025-10-18 11:44:30] 2025-10-18 09:43:44,625 | INFO     | did not find any defunct processes belonging to 1315054
[2025-10-18 11:44:30] 2025-10-18 09:43:44,625 | INFO     | ready for new job
[2025-10-18 11:44:30] 2025-10-18 09:43:44,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 11:44:30] 2025-10-18 09:43:44,625 | INFO     | ***************************************
[2025-10-18 11:44:30] 2025-10-18 09:43:44,625 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 11:44:30] 2025-10-18 09:43:44,625 | INFO     | ***************************************
[2025-10-18 11:44:30] 2025-10-18 09:43:44,625 | INFO     | 
[2025-10-18 11:44:30] 2025-10-18 09:43:44,626 | INFO     | architecture information:
[2025-10-18 11:44:30] 2025-10-18 09:43:44,626 | INFO     | executing command: cat /etc/os-release
[2025-10-18 11:44:30] 2025-10-18 09:43:44,636 | INFO     | cat /etc/os-release:
[2025-10-18 11:44:30] NAME="CentOS Linux"
[2025-10-18 11:44:30] VERSION="7 (Core)"
[2025-10-18 11:44:30] ID="centos"
[2025-10-18 11:44:30] ID_LIKE="rhel fedora"
[2025-10-18 11:44:30] VERSION_ID="7"
[2025-10-18 11:44:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 11:44:30] ANSI_COLOR="0;31"
[2025-10-18 11:44:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 11:44:30] HOME_URL="https://www.centos.org/"
[2025-10-18 11:44:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 11:44:30] 
[2025-10-18 11:44:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 11:44:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 11:44:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 11:44:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 11:44:30] 
[2025-10-18 11:44:30] 2025-10-18 09:43:44,636 | INFO     | ***************************************
[2025-10-18 11:44:30] 2025-10-18 09:43:45,140 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-18 11:44:30] 2025-10-18 09:43:45,152 | INFO     | sufficient remaining disk space (330224893952 B)
[2025-10-18 11:44:30] 2025-10-18 09:43:45,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 11:44:30] 2025-10-18 09:43:45,153 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 11:44:30] 2025-10-18 09:43:45,153 | INFO     | update_server=False
[2025-10-18 11:44:30] 2025-10-18 09:43:45,153 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 11:44:30] 2025-10-18 09:43:45,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 11:44:30] 2025-10-18 09:43:45,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 11:44:30] 2025-10-18 09:43:45,726 | INFO     | aborting loop
[2025-10-18 11:44:30] 2025-10-18 09:43:45,837 | INFO     | all job control threads have been joined
[2025-10-18 11:44:30] 2025-10-18 09:43:45,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 11:44:30] 2025-10-18 09:43:46,050 | INFO     | all data control threads have been joined
[2025-10-18 11:44:30] 2025-10-18 09:43:46,098 | INFO     | all payload control threads have been joined
[2025-10-18 11:44:30] 2025-10-18 09:43:46,158 | INFO     | [job] queue monitor thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:46,159 | INFO     | [job] retrieve thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:46,309 | INFO     | [payload] validate_post thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:46,662 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:46,724 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:46,731 | INFO     | [job] job monitor thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:46,844 | INFO     | [job] control thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:47,056 | INFO     | [data] control thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:47,104 | INFO     | [payload] control thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:47,343 | INFO     | [job] validate thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:47,363 | INFO     | [data] copytool_in thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:47,371 | INFO     | [payload] failed_post thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:47,425 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:47,475 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:47,967 | INFO     | [data] copytool_out thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:43:48,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 11:44:30] 2025-10-18 09:43:52,197 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 11:44:30] 2025-10-18 09:44:15,397 | INFO     | PID=1308611 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 11:44:30] 2025-10-18 09:44:15,397 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 11:44:30] 2025-10-18 09:44:15,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 11:44:30] 2025-10-18 09:44:15,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 11:44:30] 2025-10-18 09:44:24,256 | INFO     | [monitor] cgroup control has ended
[2025-10-18 11:44:30] 2025-10-18 09:44:25,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314568787776)>', '<ExcThread(monitor, started 140313947526912)>']
[2025-10-18 11:44:30] 2025-10-18 09:44:26,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 11:44:30] 2025-10-18 09:44:26,457 | INFO     | [monitor] control thread has ended
[2025-10-18 11:44:30] 2025-10-18 09:44:30,766 | INFO     | all workflow threads have been joined
[2025-10-18 11:44:30] 2025-10-18 09:44:30,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 11:44:30] 2025-10-18 09:44:30,767 | INFO     | traces error code: 0
[2025-10-18 11:44:30] 2025-10-18 09:44:30,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 11:44:30] 2025-10-18 09:44:30,815 [wrapper] ==== pilot stdout END ====
[2025-10-18 11:44:30] 2025-10-18 09:44:30,818 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 11:44:30] 2025-10-18 09:44:30,821 [wrapper] pilotpid: 1308611
[2025-10-18 11:44:30] 2025-10-18 09:44:30,823 [wrapper] Pilot exit status: 0
[2025-10-18 11:44:30] 2025-10-18 09:44:30,831 [wrapper] pandaids: 6848001908
[2025-10-18 11:44:30] 2025-10-18 09:44:30,847 [wrapper] cleanup supervisor_pilot 1327212 1308612
[2025-10-18 11:44:30] 2025-10-18 09:44:30,850 [wrapper] Test setup, not cleaning
[2025-10-18 11:44:30] 2025-10-18 09:44:30,852 [wrapper] apfmon messages muted
[2025-10-18 11:44:30] 2025-10-18 09:44:30,855 [wrapper] ==== wrapper stdout END ====
[2025-10-18 11:44:30] 2025-10-18 09:44:30,857 [wrapper] ==== wrapper stderr END ====
[2025-10-18 11:44:30]  *** Error codes and diagnostics ***
[2025-10-18 11:44:30]     "exeErrorCode": 0,
[2025-10-18 11:44:30]     "exeErrorDiag": "",
[2025-10-18 11:44:30]     "pilotErrorCode": 0,
[2025-10-18 11:44:30]     "pilotErrorDiag": "",
[2025-10-18 11:44:30]  *** Listing of results directory ***
[2025-10-18 11:44:30] total 424584
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc    557409 Oct 17 18:47 pilot3.tar.gz
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc      5112 Oct 17 19:19 queuedata.json
[2025-10-18 11:44:30] -rwx------ 1 boinc boinc     36292 Oct 17 19:19 runpilot2-wrapper.sh
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc       100 Oct 18 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 11:44:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 10:06 run_atlas
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc       105 Oct 18 10:06 job.xml
[2025-10-18 11:44:30] -rw-r--r-- 2 boinc boinc 225994502 Oct 18 10:06 EVNT.46771634._001321.pool.root.1
[2025-10-18 11:44:30] -rw-r--r-- 2 boinc boinc    569678 Oct 18 10:06 input.tar.gz
[2025-10-18 11:44:30] -rw-r--r-- 2 boinc boinc     15120 Oct 18 10:06 start_atlas.sh
[2025-10-18 11:44:30] drwxrwx--x 2 boinc boinc      4096 Oct 18 10:06 shared
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc         0 Oct 18 10:06 boinc_setup_complete
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc      6200 Oct 18 10:06 init_data.xml
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc         0 Oct 18 10:06 boinc_lockfile
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc      2558 Oct 18 10:06 pandaJob.out
[2025-10-18 11:44:30] -rw------- 1 boinc boinc    976741 Oct 18 10:06 agis_schedconf.cvmfs.json
[2025-10-18 11:44:30] -rw------- 1 boinc boinc   1560740 Oct 18 10:06 agis_ddmendpoints.agis.ALL.json
[2025-10-18 11:44:30] drwx------ 5 boinc boinc      4096 Oct 18 10:06 pilot3
[2025-10-18 11:44:30] -rw------- 1 boinc boinc 202658445 Oct 18 11:43 HITS.46771637._029488.pool.root.1
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc       529 Oct 18 11:43 boinc_task_state.xml
[2025-10-18 11:44:30] -rw------- 1 boinc boinc      1019 Oct 18 11:43 memory_monitor_summary.json
[2025-10-18 11:44:30] -rw------- 1 boinc boinc    259683 Oct 18 11:43 log.46771637._029488.job.log.tgz.1
[2025-10-18 11:44:30] -rw------- 1 boinc boinc        95 Oct 18 11:43 pilot_heartbeat.json
[2025-10-18 11:44:30] -rw------- 1 boinc boinc      7755 Oct 18 11:43 heartbeat.json
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc      8192 Oct 18 11:44 boinc_mmap_file
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc        27 Oct 18 11:44 wrapper_checkpoint.txt
[2025-10-18 11:44:30] -rw------- 1 boinc boinc      4752 Oct 18 11:44 pilotlog.txt
[2025-10-18 11:44:30] -rw------- 1 boinc boinc    851000 Oct 18 11:44 log.46771637._029488.job.log.1
[2025-10-18 11:44:30] -rw------- 1 boinc boinc       357 Oct 18 11:44 output.list
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc       620 Oct 18 11:44 runtime_log
[2025-10-18 11:44:30] -rw------- 1 boinc boinc   1126400 Oct 18 11:44 result.tar.gz
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc      8787 Oct 18 11:44 runtime_log.err
[2025-10-18 11:44:30] -rw------- 1 boinc boinc       660 Oct 18 11:44 5y3NDmQI3T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9LuNDmRFsVKm.diag
[2025-10-18 11:44:30] -rw-r--r-- 1 boinc boinc     21894 Oct 18 11:44 stderr.txt
[2025-10-18 11:44:30] HITS file was successfully produced:
[2025-10-18 11:44:30] -rw------- 1 boinc boinc 202658445 Oct 18 11:43 shared/HITS.pool.root.1
[2025-10-18 11:44:30]  *** Contents of shared directory: ***
[2025-10-18 11:44:30] total 420292
[2025-10-18 11:44:30] -rw-r--r-- 2 boinc boinc 225994502 Oct 18 10:06 ATLAS.root_0
[2025-10-18 11:44:30] -rw-r--r-- 2 boinc boinc    569678 Oct 18 10:06 input.tar.gz
[2025-10-18 11:44:30] -rw-r--r-- 2 boinc boinc     15120 Oct 18 10:06 start_atlas.sh
[2025-10-18 11:44:30] -rw------- 1 boinc boinc 202658445 Oct 18 11:43 HITS.pool.root.1
[2025-10-18 11:44:30] -rw------- 1 boinc boinc   1126400 Oct 18 11:44 result.tar.gz
11:44:32 (1304884): run_atlas exited; CPU time 16834.919731
11:44:32 (1304884): called boinc_finish(0)

</stderr_txt>
]]>

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