Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
12:42:38 (1220133): wrapper (7.7.26015): starting
12:42:38 (1220133): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 12:42:38] Arguments: --nthreads 12
[2025-10-18 12:42:38] Threads: 12
[2025-10-18 12:42:38] Checking for CVMFS
[2025-10-18 12:42:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 12:42:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 12:42:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 12:42:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 12:42:38] 2.11.4.0 4019 1202 111400 151848 0 188 2375814 4096000 912 130560 0 3730380 99.998 41167 599 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-18 12:42:38] CVMFS is ok
[2025-10-18 12:42:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 12:42:38] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-18 12:42:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-18 12:42:38] Further information can be found at the LHC@home message board.
[2025-10-18 12:42:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 12:42:38] Checking for apptainer binary...
[2025-10-18 12:42:38] which: no apptainer in (/home/ti-kako/.local/bin:/home/ti-kako/bin:/usr/lib64/ccache:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-18 12:42:38] apptainer is not installed, using version from CVMFS
[2025-10-18 12:42:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 12:42:39] sonata
[2025-10-18 12:42:39] apptainer works
[2025-10-18 12:42:39] Set ATHENA_PROC_NUMBER=12
[2025-10-18 12:42:39] Set ATHENA_CORE_NUMBER=12
[2025-10-18 12:42:39] Starting ATLAS job with PandaID=6837346048
[2025-10-18 12:42:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 13:23:03]  *** The last 200 lines of the pilot log: ***
[2025-10-18 13:23:03]  status=None
[2025-10-18 13:23:03]  status_code=0
[2025-10-18 13:23:03]  storage_token=
[2025-10-18 13:23:03]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6837346048/log.46676269._020084.job.log.tgz.1
[2025-10-18 13:23:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/b4/log.46676269._020084.job.log.tgz.1
[2025-10-18 13:23:03]  workdir=None
[2025-10-18 13:23:03] ]
[2025-10-18 13:23:03] 2025-10-18 11:22:24,520 | INFO     | transferring file log.46676269._020084.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6837346048/log.46676269._020084.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-18 13:23:03] 2025-10-18 11:22:24,520 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6837346048/log.46676269._020084.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._020084.job
[2025-10-18 13:23:03] 2025-10-18 11:22:24,536 | INFO     | adding to output.list: log.46676269._020084.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/b4/log.46676269._020084.job.log.tg
[2025-10-18 13:23:03] 2025-10-18 11:22:24,536 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 13:23:03] 2025-10-18 11:22:24,536 | INFO     | summary of transferred files:
[2025-10-18 13:23:03] 2025-10-18 11:22:24,536 | INFO     |  -- lfn=log.46676269._020084.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 13:23:03] 2025-10-18 11:22:24,536 | INFO     | stage-out finished correctly
[2025-10-18 13:23:03] 2025-10-18 11:22:26,160 | INFO     | time since job start (2378s) is within the limit (172800.0s)
[2025-10-18 13:23:03] 2025-10-18 11:22:27,811 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 13:23:03] 2025-10-18 11:22:28,165 | INFO     | time since job start (2380s) is within the limit (172800.0s)
[2025-10-18 13:23:03] 2025-10-18 11:22:29,268 | INFO     | PID=1223968 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 13:23:03] 2025-10-18 11:22:29,268 | INFO     | .. there are 2 such processes running
[2025-10-18 13:23:03] 2025-10-18 11:22:29,668 | INFO     | job 6837346048 has state=finished
[2025-10-18 13:23:03] 2025-10-18 11:22:29,668 | INFO     | preparing for final server update for job 6837346048 in state='finished'
[2025-10-18 13:23:03] 2025-10-18 11:22:29,668 | INFO     | this job has now completed (state=finished)
[2025-10-18 13:23:03] 2025-10-18 11:22:29,668 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 13:23:03] 2025-10-18 11:22:29,668 | INFO     | log transfer has been attempted: DONE
[2025-10-18 13:23:03] 2025-10-18 11:22:29,668 | INFO     | job 6837346048 has finished - writing final server update
[2025-10-18 13:23:03] 2025-10-18 11:22:29,668 | INFO     | total number of processed events: 400 (read)
[2025-10-18 13:23:03] 2025-10-18 11:22:29,669 | INFO     | executing command: lscpu
[2025-10-18 13:23:03] 2025-10-18 11:22:29,684 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 13:23:03] 2025-10-18 11:22:30,269 | INFO     | time since job start (2382s) is within the limit (172800.0s)
[2025-10-18 13:23:03] 2025-10-18 11:22:31,098 | WARNING  | process 1230613 can no longer be monitored (due to stat problems) - aborting
[2025-10-18 13:23:03] 2025-10-18 11:22:31,098 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6837346048/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 13:23:03] 2025-10-18 11:22:31,189 | INFO     | number of running child processes to parent process 1230613: 1
[2025-10-18 13:23:03] 2025-10-18 11:22:31,189 | INFO     | maximum number of monitored processes: 6
[2025-10-18 13:23:03] 2025-10-18 11:22:31,561 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-18 13:23:03] 2025-10-18 11:22:31,564 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3262.5644375000006
[2025-10-18 13:23:03] 2025-10-18 11:22:31,566 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6837346048/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 13:23:03] 2025-10-18 11:22:31,566 | INFO     | extracted standard info from prmon json
[2025-10-18 13:23:03] 2025-10-18 11:22:31,566 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 13:23:03] 2025-10-18 11:22:31,566 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 13:23:03] 2025-10-18 11:22:31,566 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 13:23:03] 2025-10-18 11:22:31,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | fitting pss+swap vs Time
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | sum of square deviations: 10150888.0
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | sum of deviations: 185233454.0
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | mean x: 1760785441.5
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | mean y: 2889301.0625
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | -- intersect: -32127932069.63531
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | intersect: -32127932069.63531
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | chi2: 0.00014039819094384515
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | -- intersect: -32127932069.63531
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | current memory leak: 18.25 B/s (using 32 data points, chi2=0.00)
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | could have reported an average CPU frequency of 3505 MHz (5 samples)
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | ..............................
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | . Timing measurements:
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | . get job = 0 s
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | . initial setup = 1 s
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | . payload setup = 4 s
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | . stage-in = 0 s
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | . payload execution = 2353 s
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | . stage-out = 0 s
[2025-10-18 13:23:03] 2025-10-18 11:22:31,567 | INFO     | . log creation = 0 s
[2025-10-18 13:23:03] 2025-10-18 11:22:31,568 | INFO     | ..............................
[2025-10-18 13:23:03] 2025-10-18 11:22:31,598 | INFO     | 
[2025-10-18 13:23:03] 2025-10-18 11:22:31,598 | INFO     | job summary report
[2025-10-18 13:23:03] 2025-10-18 11:22:31,598 | INFO     | --------------------------------------------------
[2025-10-18 13:23:03] 2025-10-18 11:22:31,598 | INFO     | PanDA job id: 6837346048
[2025-10-18 13:23:03] 2025-10-18 11:22:31,598 | INFO     | task id: 46676269
[2025-10-18 13:23:03] 2025-10-18 11:22:31,598 | INFO     | errors: (none)
[2025-10-18 13:23:03] 2025-10-18 11:22:31,598 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 13:23:03] 2025-10-18 11:22:31,598 | INFO     | pilot state: finished 
[2025-10-18 13:23:03] 2025-10-18 11:22:31,598 | INFO     | transexitcode: 0
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | exeerrorcode: 0
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | exeerrordiag: 
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | exitcode: 0
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | exitmsg: OK
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | cpuconsumptiontime: 25590 s
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | nevents: 400
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | neventsw: 0
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | pid: 1230613
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | pgrp: 1230613
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | corecount: 12
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | event service: False
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | sizes: {0: 2348747, 1: 2348946, 4: 2349208, 11: 2349236, 2362: 2383398, 2366: 2383398, 2369: 2383752}
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | --------------------------------------------------
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | 
[2025-10-18 13:23:03] 2025-10-18 11:22:31,599 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-18 13:23:03] 2025-10-18 11:22:31,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | job 6837346048 has completed (purged errors)
[2025-10-18 13:23:03] 2025-10-18 11:22:31,611 | INFO     | overall cleanup function is called
[2025-10-18 13:23:03] 2025-10-18 11:22:32,618 | INFO     | --- collectZombieJob: --- 10, [1230613]
[2025-10-18 13:23:03] 2025-10-18 11:22:32,618 | INFO     | zombie collector waiting for pid 1230613
[2025-10-18 13:23:03] 2025-10-18 11:22:32,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 13:23:03] 2025-10-18 11:22:32,618 | INFO     | collected zombie processes
[2025-10-18 13:23:03] 2025-10-18 11:22:32,618 | INFO     | will attempt to kill all subprocesses of pid=1230613
[2025-10-18 13:23:03] 2025-10-18 11:22:32,703 | INFO     | process IDs to be killed: [1230613] (in reverse order)
[2025-10-18 13:23:03] 2025-10-18 11:22:32,741 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 13:23:03] 2025-10-18 11:22:32,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 13:23:03] 2025-10-18 11:22:32,743 | INFO     | did not find any defunct processes belonging to 1230613
[2025-10-18 13:23:03] 2025-10-18 11:22:32,745 | INFO     | did not find any defunct processes belonging to 1230613
[2025-10-18 13:23:03] 2025-10-18 11:22:32,745 | INFO     | ready for new job
[2025-10-18 13:23:03] 2025-10-18 11:22:32,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 13:23:03] 2025-10-18 11:22:32,746 | INFO     | ***************************************
[2025-10-18 13:23:03] 2025-10-18 11:22:32,746 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 13:23:03] 2025-10-18 11:22:32,746 | INFO     | ***************************************
[2025-10-18 13:23:03] 2025-10-18 11:22:32,746 | INFO     | 
[2025-10-18 13:23:03] 2025-10-18 11:22:32,747 | INFO     | architecture information:
[2025-10-18 13:23:03] 2025-10-18 11:22:32,747 | INFO     | executing command: cat /etc/os-release
[2025-10-18 13:23:03] 2025-10-18 11:22:32,755 | INFO     | cat /etc/os-release:
[2025-10-18 13:23:03] NAME="CentOS Linux"
[2025-10-18 13:23:03] VERSION="7 (Core)"
[2025-10-18 13:23:03] ID="centos"
[2025-10-18 13:23:03] ID_LIKE="rhel fedora"
[2025-10-18 13:23:03] VERSION_ID="7"
[2025-10-18 13:23:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 13:23:03] ANSI_COLOR="0;31"
[2025-10-18 13:23:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 13:23:03] HOME_URL="https://www.centos.org/"
[2025-10-18 13:23:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 13:23:03] 
[2025-10-18 13:23:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 13:23:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 13:23:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 13:23:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 13:23:03] 
[2025-10-18 13:23:03] 2025-10-18 11:22:32,755 | INFO     | ***************************************
[2025-10-18 13:23:03] 2025-10-18 11:22:33,258 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-18 13:23:03] 2025-10-18 11:22:33,265 | INFO     | sufficient remaining disk space (966079283200 B)
[2025-10-18 13:23:03] 2025-10-18 11:22:33,265 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 13:23:03] 2025-10-18 11:22:33,265 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 13:23:03] 2025-10-18 11:22:33,265 | INFO     | update_server=False
[2025-10-18 13:23:03] 2025-10-18 11:22:33,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 13:23:03] 2025-10-18 11:22:33,265 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:23:03] 2025-10-18 11:22:33,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 13:23:03] 2025-10-18 11:22:33,559 | INFO     | all job control threads have been joined
[2025-10-18 13:23:03] 2025-10-18 11:22:33,692 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 13:23:03] 2025-10-18 11:22:33,692 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 13:23:03] 2025-10-18 11:22:33,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:23:03] 2025-10-18 11:22:33,692 | INFO     | will abort loop
[2025-10-18 13:23:03] 2025-10-18 11:22:33,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 13:23:03] 2025-10-18 11:22:34,055 | INFO     | all data control threads have been joined
[2025-10-18 13:23:03] 2025-10-18 11:22:34,074 | INFO     | all payload control threads have been joined
[2025-10-18 13:23:03] 2025-10-18 11:22:34,270 | INFO     | [job] retrieve thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:34,270 | INFO     | [job] queue monitor thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:34,565 | INFO     | [job] control thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:34,697 | INFO     | [job] job monitor thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:34,856 | INFO     | [payload] validate_post thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:34,989 | INFO     | [job] validate thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:35,060 | INFO     | [data] control thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:35,080 | INFO     | [payload] control thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:35,231 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:35,271 | INFO     | [data] copytool_out thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:35,373 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:35,414 | INFO     | [data] copytool_in thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:35,729 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:35,814 | INFO     | [payload] failed_post thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:37,853 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:43,560 | INFO     | job.realtimelogging is not enabled
[2025-10-18 13:23:03] 2025-10-18 11:22:44,565 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 13:23:03] 2025-10-18 11:22:51,566 | INFO     | [monitor] cgroup control has ended
[2025-10-18 13:23:03] 2025-10-18 11:22:52,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245020120896)>', '<ExcThread(monitor, started 140244464674560)>']
[2025-10-18 13:23:03] 2025-10-18 11:22:57,036 | INFO     | all workflow threads have been joined
[2025-10-18 13:23:03] 2025-10-18 11:22:57,037 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 13:23:03] 2025-10-18 11:22:57,037 | INFO     | traces error code: 0
[2025-10-18 13:23:03] 2025-10-18 11:22:57,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 13:23:03] 2025-10-18 11:23:03,433 | INFO     | PID=1223968 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 13:23:03] 2025-10-18 11:23:03,433 | INFO     | .. there are 2 such processes running
[2025-10-18 13:23:03] 2025-10-18 11:23:03,433 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 13:23:03] 2025-10-18 11:23:03,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 13:23:03] 2025-10-18 11:23:03,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 13:23:03] 2025-10-18 11:23:03,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 13:23:03] 2025-10-18 11:23:03,433 | INFO     | [monitor] control thread has ended
[2025-10-18 13:23:03] 2025-10-18 11:23:03,490 [wrapper] ==== pilot stdout END ====
[2025-10-18 13:23:03] 2025-10-18 11:23:03,491 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 13:23:03] 2025-10-18 11:23:03,493 [wrapper] pilotpid: 1223968
[2025-10-18 13:23:03] 2025-10-18 11:23:03,495 [wrapper] Pilot exit status: 0
[2025-10-18 13:23:03] 2025-10-18 11:23:03,500 [wrapper] pandaids: 6837346048
[2025-10-18 13:23:03] 2025-10-18 11:23:03,522 [wrapper] cleanup supervisor_pilot 1239964 1223969
[2025-10-18 13:23:03] 2025-10-18 11:23:03,523 [wrapper] Test setup, not cleaning
[2025-10-18 13:23:03] 2025-10-18 11:23:03,525 [wrapper] apfmon messages muted
[2025-10-18 13:23:03] 2025-10-18 11:23:03,526 [wrapper] ==== wrapper stdout END ====
[2025-10-18 13:23:03] 2025-10-18 11:23:03,527 [wrapper] ==== wrapper stderr END ====
[2025-10-18 13:23:03]  *** Error codes and diagnostics ***
[2025-10-18 13:23:03]     "exeErrorCode": 0,
[2025-10-18 13:23:03]     "exeErrorDiag": "",
[2025-10-18 13:23:03]     "pilotErrorCode": 0,
[2025-10-18 13:23:03]     "pilotErrorDiag": "",
[2025-10-18 13:23:03]  *** Listing of results directory ***
[2025-10-18 13:23:03] total 405440
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako    557409  9 oct.  16:08 pilot3.tar.gz
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako      5112  9 oct.  16:23 queuedata.json
[2025-10-18 13:23:03] -rwx------ 1 ti-kako ti-kako     36292  9 oct.  16:25 runpilot2-wrapper.sh
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako       100 18 oct.  12:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 13:23:03] -rwxr-xr-x 1 ti-kako ti-kako      7986 18 oct.  12:42 run_atlas
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako       105 18 oct.  12:42 job.xml
[2025-10-18 13:23:03] -rw-r--r-- 2 ti-kako ti-kako 222992032 18 oct.  12:42 EVNT.46676267._000835.pool.root.1
[2025-10-18 13:23:03] -rw-r--r-- 2 ti-kako ti-kako    569680 18 oct.  12:42 input.tar.gz
[2025-10-18 13:23:03] -rw-r--r-- 2 ti-kako ti-kako     15120 18 oct.  12:42 start_atlas.sh
[2025-10-18 13:23:03] drwxrwx--x 1 ti-kako ti-kako        76 18 oct.  12:42 shared
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako         0 18 oct.  12:42 boinc_setup_complete
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako      8914 18 oct.  12:42 init_data.xml
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako         0 18 oct.  12:42 boinc_lockfile
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako      2548 18 oct.  12:42 pandaJob.out
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako    976749 18 oct.  12:42 agis_schedconf.cvmfs.json
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako   1560740 18 oct.  12:42 agis_ddmendpoints.agis.ALL.json
[2025-10-18 13:23:03] drwx------ 1 ti-kako ti-kako       414 18 oct.  12:42 pilot3
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako 186832145 18 oct.  13:22 HITS.46676269._020084.pool.root.1
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako       530 18 oct.  13:22 boinc_task_state.xml
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako        95 18 oct.  13:22 pilot_heartbeat.json
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako      1015 18 oct.  13:22 memory_monitor_summary.json
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako    345502 18 oct.  13:22 log.46676269._020084.job.log.tgz.1
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako      7735 18 oct.  13:22 heartbeat.json
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako        27 18 oct.  13:22 wrapper_checkpoint.txt
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako      8192 18 oct.  13:22 boinc_mmap_file
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako       822 18 oct.  13:23 pilotlog.txt
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako    384383 18 oct.  13:23 log.46676269._020084.job.log.1
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako       357 18 oct.  13:23 output.list
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako       620 18 oct.  13:23 runtime_log
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako    747520 18 oct.  13:23 result.tar.gz
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako      8645 18 oct.  13:23 runtime_log.err
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako       638 18 oct.  13:23 3TRMDmkl6Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzMaNDm4zgmzm.diag
[2025-10-18 13:23:03] -rw-r--r-- 1 ti-kako ti-kako     22260 18 oct.  13:23 stderr.txt
[2025-10-18 13:23:03] HITS file was successfully produced:
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako 186832145 18 oct.  13:22 shared/HITS.pool.root.1
[2025-10-18 13:23:03]  *** Contents of shared directory: ***
[2025-10-18 13:23:03] total 401532
[2025-10-18 13:23:03] -rw-r--r-- 2 ti-kako ti-kako 222992032 18 oct.  12:42 ATLAS.root_0
[2025-10-18 13:23:03] -rw-r--r-- 2 ti-kako ti-kako    569680 18 oct.  12:42 input.tar.gz
[2025-10-18 13:23:03] -rw-r--r-- 2 ti-kako ti-kako     15120 18 oct.  12:42 start_atlas.sh
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako 186832145 18 oct.  13:22 HITS.pool.root.1
[2025-10-18 13:23:03] -rw------- 1 ti-kako ti-kako    747520 18 oct.  13:23 result.tar.gz
13:23:04 (1220133): run_atlas exited; CPU time 25608.251750
13:23:04 (1220133): called boinc_finish(0)

</stderr_txt>
]]>

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