Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:19:40 (23401): wrapper (7.7.26015): starting
10:19:40 (23401): wrapper: running run_atlas (--nthreads 8)
[2025-10-17 10:19:40] Arguments: --nthreads 8
[2025-10-17 10:19:40] Threads: 8
[2025-10-17 10:19:40] Checking for CVMFS
[2025-10-17 10:19:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 10:19:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 10:19:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 10:19:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 10:19:40] 2.11.2.0 2765 9758 78812 151818 2 56 16776530 20275200 1 130560 0 5674147 99.970 642278 38466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-17 10:19:40] CVMFS is ok
[2025-10-17 10:19:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 10:19:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 10:19:40] Further information can be found at the LHC@home message board.
[2025-10-17 10:19:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 10:19:40] Checking for apptainer binary...
[2025-10-17 10:19:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 10:19:40] Running /usr/bin/apptainer --version
[2025-10-17 10:19:40] apptainer version 1.3.2-1.el7
[2025-10-17 10:19:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 10:19:42] c-204-21.aglt2.org
[2025-10-17 10:19:42] apptainer works
[2025-10-17 10:19:42] Set ATHENA_PROC_NUMBER=8
[2025-10-17 10:19:42] Set ATHENA_CORE_NUMBER=8
[2025-10-17 10:19:42] Starting ATLAS job with PandaID=6847354025
[2025-10-17 10:19:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 12:41:20]  *** The last 200 lines of the pilot log: ***
[2025-10-17 12:41:20] 2025-10-17 16:40:31,619 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 12:41:20] 2025-10-17 16:40:31,620 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 12:41:20] 2025-10-17 16:40:31,620 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 12:41:20] 2025-10-17 16:40:31,623 | INFO     | fitting pss+swap vs Time
[2025-10-17 12:41:20] 2025-10-17 16:40:31,624 | INFO     | sum of square deviations: 814878534.5
[2025-10-17 12:41:20] 2025-10-17 16:40:31,624 | INFO     | sum of deviations: -19713306132.999996
[2025-10-17 12:41:20] 2025-10-17 16:40:31,625 | INFO     | mean x: 1760715009.5
[2025-10-17 12:41:20] 2025-10-17 16:40:31,625 | INFO     | mean y: 2548674.9855072466
[2025-10-17 12:41:20] 2025-10-17 16:40:31,625 | INFO     | -- intersect: 42597257611.00976
[2025-10-17 12:41:20] 2025-10-17 16:40:31,625 | INFO     | intersect: 42597257611.00976
[2025-10-17 12:41:20] 2025-10-17 16:40:31,625 | INFO     | chi2: 2.5671960982519515
[2025-10-17 12:41:20] 2025-10-17 16:40:31,626 | INFO     | sum of square deviations: 729472282.0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,626 | INFO     | sum of deviations: -8750911159.999998
[2025-10-17 12:41:20] 2025-10-17 16:40:31,626 | INFO     | mean x: 1760714857.0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,627 | INFO     | mean y: 2567743.3157894737
[2025-10-17 12:41:20] 2025-10-17 16:40:31,627 | INFO     | -- intersect: 21124493376.26136
[2025-10-17 12:41:20] 2025-10-17 16:40:31,627 | INFO     | intersect: 21124493376.26136
[2025-10-17 12:41:20] 2025-10-17 16:40:31,627 | INFO     | chi2: 1.7037303367315397
[2025-10-17 12:41:20] 2025-10-17 16:40:31,627 | INFO     | current chi2=1.7037303367315397 (change=33.63458530138623 %)
[2025-10-17 12:41:20] 2025-10-17 16:40:31,627 | INFO     | sum of square deviations: 650252192.0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,628 | INFO     | sum of deviations: -7617833628.5
[2025-10-17 12:41:20] 2025-10-17 16:40:31,628 | INFO     | mean x: 1760714704.5
[2025-10-17 12:41:20] 2025-10-17 16:40:31,628 | INFO     | mean y: 2569926.1796875
[2025-10-17 12:41:20] 2025-10-17 16:40:31,628 | INFO     | -- intersect: 20629692527.458885
[2025-10-17 12:41:20] 2025-10-17 16:40:31,629 | INFO     | intersect: 20629692527.458885
[2025-10-17 12:41:20] 2025-10-17 16:40:31,629 | INFO     | chi2: 1.7045053215406603
[2025-10-17 12:41:20] 2025-10-17 16:40:31,629 | INFO     | current chi2=1.7045053215406603 (change=-0.04548752771564006 %)
[2025-10-17 12:41:20] 2025-10-17 16:40:31,629 | INFO     | right removable region: 127
[2025-10-17 12:41:20] 2025-10-17 16:40:31,629 | INFO     | sum of square deviations: 729472282.0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,630 | INFO     | sum of deviations: -41197629902.00001
[2025-10-17 12:41:20] 2025-10-17 16:40:31,630 | INFO     | mean x: 1760715162.0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,630 | INFO     | mean y: 2586407.5714285714
[2025-10-17 12:41:20] 2025-10-17 16:40:31,630 | INFO     | -- intersect: 99440623186.76187
[2025-10-17 12:41:20] 2025-10-17 16:40:31,631 | INFO     | intersect: 99440623186.76187
[2025-10-17 12:41:20] 2025-10-17 16:40:31,631 | INFO     | chi2: 1.0433834402745694
[2025-10-17 12:41:20] 2025-10-17 16:40:31,631 | INFO     | current chi2=1.0433834402745694 (change=59.357080630302164 %)
[2025-10-17 12:41:20] 2025-10-17 16:40:31,631 | INFO     | sum of square deviations: 650252192.0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,632 | INFO     | sum of deviations: -39811410910.5
[2025-10-17 12:41:20] 2025-10-17 16:40:31,632 | INFO     | mean x: 1760715314.5
[2025-10-17 12:41:20] 2025-10-17 16:40:31,632 | INFO     | mean y: 2583656.9453125
[2025-10-17 12:41:20] 2025-10-17 16:40:31,632 | INFO     | -- intersect: 107801621852.221
[2025-10-17 12:41:20] 2025-10-17 16:40:31,633 | INFO     | intersect: 107801621852.221
[2025-10-17 12:41:20] 2025-10-17 16:40:31,633 | INFO     | chi2: 1.0256816309196828
[2025-10-17 12:41:20] 2025-10-17 16:40:31,633 | INFO     | current chi2=1.0256816309196828 (change=1.6965775640667968 %)
[2025-10-17 12:41:20] 2025-10-17 16:40:31,633 | INFO     | left removable region: 20
[2025-10-17 12:41:20] 2025-10-17 16:40:31,633 | INFO     | sum of square deviations: 379832238.0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,634 | INFO     | sum of deviations: -21170399408.000004
[2025-10-17 12:41:20] 2025-10-17 16:40:31,634 | INFO     | mean x: 1760715284.0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,634 | INFO     | mean y: 2595670.7102803737
[2025-10-17 12:41:20] 2025-10-17 16:40:31,634 | INFO     | -- intersect: 98138146255.67711
[2025-10-17 12:41:20] 2025-10-17 16:40:31,634 | INFO     | intersect: 98138146255.67711
[2025-10-17 12:41:20] 2025-10-17 16:40:31,634 | INFO     | chi2: 0.10586235697009796
[2025-10-17 12:41:20] 2025-10-17 16:40:31,635 | INFO     | -- intersect: 98138146255.67711
[2025-10-17 12:41:20] 2025-10-17 16:40:31,635 | INFO     | current memory leak: -55.74 B/s (using 107 data points, chi2=0.11)
[2025-10-17 12:41:20] 2025-10-17 16:40:31,635 | INFO     | could have reported an average CPU frequency of 2001 MHz (8 samples)
[2025-10-17 12:41:20] 2025-10-17 16:40:31,635 | INFO     | ..............................
[2025-10-17 12:41:20] 2025-10-17 16:40:31,636 | INFO     | . Timing measurements:
[2025-10-17 12:41:20] 2025-10-17 16:40:31,636 | INFO     | . get job = 0 s
[2025-10-17 12:41:20] 2025-10-17 16:40:31,636 | INFO     | . initial setup = 2 s
[2025-10-17 12:41:20] 2025-10-17 16:40:31,636 | INFO     | . payload setup = 8 s
[2025-10-17 12:41:20] 2025-10-17 16:40:31,636 | INFO     | . stage-in = 0 s
[2025-10-17 12:41:20] 2025-10-17 16:40:31,636 | INFO     | . payload execution = 8391 s
[2025-10-17 12:41:20] 2025-10-17 16:40:31,636 | INFO     | . stage-out = 0 s
[2025-10-17 12:41:20] 2025-10-17 16:40:31,636 | INFO     | . log creation = 0 s
[2025-10-17 12:41:20] 2025-10-17 16:40:31,637 | INFO     | ..............................
[2025-10-17 12:41:20] 2025-10-17 16:40:31,736 | INFO     | 
[2025-10-17 12:41:20] 2025-10-17 16:40:31,736 | INFO     | job summary report
[2025-10-17 12:41:20] 2025-10-17 16:40:31,736 | INFO     | --------------------------------------------------
[2025-10-17 12:41:20] 2025-10-17 16:40:31,736 | INFO     | PanDA job id: 6847354025
[2025-10-17 12:41:20] 2025-10-17 16:40:31,736 | INFO     | task id: 46771637
[2025-10-17 12:41:20] 2025-10-17 16:40:31,737 | INFO     | errors: (none)
[2025-10-17 12:41:20] 2025-10-17 16:40:31,737 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 12:41:20] 2025-10-17 16:40:31,737 | INFO     | pilot state: finished 
[2025-10-17 12:41:20] 2025-10-17 16:40:31,737 | INFO     | transexitcode: 0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,737 | INFO     | exeerrorcode: 0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,737 | INFO     | exeerrordiag: 
[2025-10-17 12:41:20] 2025-10-17 16:40:31,738 | INFO     | exitcode: 0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,738 | INFO     | exitmsg: OK
[2025-10-17 12:41:20] 2025-10-17 16:40:31,738 | INFO     | cpuconsumptiontime: 61436 s
[2025-10-17 12:41:20] 2025-10-17 16:40:31,738 | INFO     | nevents: 400
[2025-10-17 12:41:20] 2025-10-17 16:40:31,738 | INFO     | neventsw: 0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,739 | INFO     | pid: 2254
[2025-10-17 12:41:20] 2025-10-17 16:40:31,739 | INFO     | pgrp: 2254
[2025-10-17 12:41:20] 2025-10-17 16:40:31,739 | INFO     | corecount: 8
[2025-10-17 12:41:20] 2025-10-17 16:40:31,739 | INFO     | event service: False
[2025-10-17 12:41:20] 2025-10-17 16:40:31,739 | INFO     | sizes: {0: 2348755, 1: 2348954, 6: 2349216, 11: 2349244, 8403: 2377019, 8404: 2377018, 8406: 2386256, 8415: 2386394}
[2025-10-17 12:41:20] 2025-10-17 16:40:31,739 | INFO     | --------------------------------------------------
[2025-10-17 12:41:20] 2025-10-17 16:40:31,740 | INFO     | 
[2025-10-17 12:41:20] 2025-10-17 16:40:31,740 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-17 12:41:20] 2025-10-17 16:40:31,769 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,769 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,769 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,770 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 12:41:20] 2025-10-17 16:40:31,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,773 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 12:41:20] 2025-10-17 16:40:31,773 | INFO     | job 6847354025 has completed (purged errors)
[2025-10-17 12:41:20] 2025-10-17 16:40:31,773 | INFO     | overall cleanup function is called
[2025-10-17 12:41:20] 2025-10-17 16:40:32,779 | INFO     | --- collectZombieJob: --- 10, [2254]
[2025-10-17 12:41:20] 2025-10-17 16:40:32,780 | INFO     | zombie collector waiting for pid 2254
[2025-10-17 12:41:20] 2025-10-17 16:40:32,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 12:41:20] 2025-10-17 16:40:32,780 | INFO     | collected zombie processes
[2025-10-17 12:41:20] 2025-10-17 16:40:32,780 | INFO     | will attempt to kill all subprocesses of pid=2254
[2025-10-17 12:41:20] 2025-10-17 16:40:32,869 | INFO     | process IDs to be killed: [2254] (in reverse order)
[2025-10-17 12:41:20] 2025-10-17 16:40:32,923 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 12:41:20] 2025-10-17 16:40:32,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 12:41:20] 2025-10-17 16:40:32,928 | INFO     | did not find any defunct processes belonging to 2254
[2025-10-17 12:41:20] 2025-10-17 16:40:32,931 | INFO     | did not find any defunct processes belonging to 2254
[2025-10-17 12:41:20] 2025-10-17 16:40:32,932 | INFO     | ready for new job
[2025-10-17 12:41:20] 2025-10-17 16:40:32,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 12:41:20] 2025-10-17 16:40:32,935 | INFO     | ***************************************
[2025-10-17 12:41:20] 2025-10-17 16:40:32,935 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 12:41:20] 2025-10-17 16:40:32,935 | INFO     | ***************************************
[2025-10-17 12:41:20] 2025-10-17 16:40:32,935 | INFO     | 
[2025-10-17 12:41:20] 2025-10-17 16:40:32,936 | INFO     | architecture information:
[2025-10-17 12:41:20] 2025-10-17 16:40:32,937 | INFO     | executing command: cat /etc/os-release
[2025-10-17 12:41:20] 2025-10-17 16:40:32,956 | INFO     | cat /etc/os-release:
[2025-10-17 12:41:20] NAME="CentOS Linux"
[2025-10-17 12:41:20] VERSION="7 (Core)"
[2025-10-17 12:41:20] ID="centos"
[2025-10-17 12:41:20] ID_LIKE="rhel fedora"
[2025-10-17 12:41:20] VERSION_ID="7"
[2025-10-17 12:41:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 12:41:20] ANSI_COLOR="0;31"
[2025-10-17 12:41:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 12:41:20] HOME_URL="https://www.centos.org/"
[2025-10-17 12:41:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 12:41:20] 
[2025-10-17 12:41:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 12:41:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 12:41:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 12:41:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 12:41:20] 
[2025-10-17 12:41:20] 2025-10-17 16:40:32,957 | INFO     | ***************************************
[2025-10-17 12:41:20] 2025-10-17 16:40:33,460 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-17 12:41:20] 2025-10-17 16:40:33,480 | INFO     | sufficient remaining disk space (18525192192 B)
[2025-10-17 12:41:20] 2025-10-17 16:40:33,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 12:41:20] 2025-10-17 16:40:33,481 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 12:41:20] 2025-10-17 16:40:33,481 | INFO     | update_server=False
[2025-10-17 12:41:20] 2025-10-17 16:40:33,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 12:41:20] 2025-10-17 16:40:33,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 12:41:20] 2025-10-17 16:40:33,483 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 12:41:20] 2025-10-17 16:40:33,483 | INFO     | aborting loop
[2025-10-17 12:41:20] 2025-10-17 16:40:33,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 12:41:20] 2025-10-17 16:40:33,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 12:41:20] 2025-10-17 16:40:33,543 | INFO     | all data control threads have been joined
[2025-10-17 12:41:20] 2025-10-17 16:40:33,677 | INFO     | all job control threads have been joined
[2025-10-17 12:41:20] 2025-10-17 16:40:33,688 | INFO     | all payload control threads have been joined
[2025-10-17 12:41:20] 2025-10-17 16:40:34,485 | INFO     | [job] queue monitor thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:34,487 | INFO     | [job] retrieve thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:34,489 | INFO     | [job] job monitor thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:34,548 | INFO     | [data] control thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:34,583 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:34,626 | INFO     | [payload] validate_post thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:34,682 | INFO     | [job] control thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:34,693 | INFO     | [payload] control thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:34,991 | INFO     | [payload] failed_post thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:35,107 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:35,114 | INFO     | [data] copytool_in thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:35,163 | INFO     | [job] validate thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:35,171 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:35,486 | INFO     | [data] copytool_out thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:37,514 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:40:44,282 | INFO     | job.realtimelogging is not enabled
[2025-10-17 12:41:20] 2025-10-17 16:40:45,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 12:41:20] 2025-10-17 16:41:03,965 | INFO     | PID=27092 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 12:41:20] 2025-10-17 16:41:03,966 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 12:41:20] 2025-10-17 16:41:03,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 12:41:20] 2025-10-17 16:41:03,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 12:41:20] 2025-10-17 16:41:12,801 | INFO     | [monitor] cgroup control has ended
[2025-10-17 12:41:20] 2025-10-17 16:41:14,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864546760512)>', '<ExcThread(monitor, started 139863454115584)>']
[2025-10-17 12:41:20] 2025-10-17 16:41:15,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 12:41:20] 2025-10-17 16:41:15,020 | INFO     | [monitor] control thread has ended
[2025-10-17 12:41:20] 2025-10-17 16:41:19,729 | INFO     | all workflow threads have been joined
[2025-10-17 12:41:20] 2025-10-17 16:41:19,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 12:41:20] 2025-10-17 16:41:19,734 | INFO     | traces error code: 0
[2025-10-17 12:41:20] 2025-10-17 16:41:19,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 12:41:20] 2025-10-17 16:41:19,855 [wrapper] ==== pilot stdout END ====
[2025-10-17 12:41:20] 2025-10-17 16:41:19,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 12:41:20] 2025-10-17 16:41:19,865 [wrapper] pilotpid: 27092
[2025-10-17 12:41:20] 2025-10-17 16:41:19,871 [wrapper] Pilot exit status: 0
[2025-10-17 12:41:20] 2025-10-17 16:41:19,893 [wrapper] pandaids: 6847354025
[2025-10-17 12:41:20] 2025-10-17 16:41:19,949 [wrapper] cleanup supervisor_pilot 15344 27093
[2025-10-17 12:41:20] 2025-10-17 16:41:19,954 [wrapper] Test setup, not cleaning
[2025-10-17 12:41:20] 2025-10-17 16:41:19,959 [wrapper] apfmon messages muted
[2025-10-17 12:41:20] 2025-10-17 16:41:19,963 [wrapper] ==== wrapper stdout END ====
[2025-10-17 12:41:20] 2025-10-17 16:41:19,968 [wrapper] ==== wrapper stderr END ====
[2025-10-17 12:41:20]  *** Error codes and diagnostics ***
[2025-10-17 12:41:20]     "exeErrorCode": 0,
[2025-10-17 12:41:20]     "exeErrorDiag": "",
[2025-10-17 12:41:20]     "pilotErrorCode": 0,
[2025-10-17 12:41:20]     "pilotErrorDiag": "",
[2025-10-17 12:41:20]  *** Listing of results directory ***
[2025-10-17 12:41:20] total 432980
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas    557409 Oct 17 05:14 pilot3.tar.gz
[2025-10-17 12:41:20] -rwx------ 1 boincer umatlas     36292 Oct 17 05:27 runpilot2-wrapper.sh
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas      5112 Oct 17 05:27 queuedata.json
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas       100 Oct 17 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 12:41:20] -rwxr-xr-x 1 boincer umatlas      7986 Oct 17 10:19 run_atlas
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas       105 Oct 17 10:19 job.xml
[2025-10-17 12:41:20] -rw-r--r-- 2 boincer umatlas 228566831 Oct 17 10:19 EVNT.46771634._000878.pool.root.1
[2025-10-17 12:41:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 17 10:19 start_atlas.sh
[2025-10-17 12:41:20] drwxrwx--x 2 boincer umatlas      4096 Oct 17 10:19 shared
[2025-10-17 12:41:20] -rw-r--r-- 2 boincer umatlas    569675 Oct 17 10:19 input.tar.gz
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas         0 Oct 17 10:19 boinc_lockfile
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas      2556 Oct 17 10:19 pandaJob.out
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas    976733 Oct 17 10:19 agis_schedconf.cvmfs.json
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas   1560740 Oct 17 10:19 agis_ddmendpoints.agis.ALL.json
[2025-10-17 12:41:20] drwx------ 5 boincer umatlas      4096 Oct 17 10:19 pilot3
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas      5910 Oct 17 12:37 init_data.xml
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas 207784582 Oct 17 12:39 HITS.46771637._023429.pool.root.1
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas      1050 Oct 17 12:40 memory_monitor_summary.json
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas       529 Oct 17 12:40 boinc_task_state.xml
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas    377482 Oct 17 12:40 log.46771637._023429.job.log.tgz.1
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas      7848 Oct 17 12:40 heartbeat.json
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas        95 Oct 17 12:41 pilot_heartbeat.json
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas      8192 Oct 17 12:41 boinc_mmap_file
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas        27 Oct 17 12:41 wrapper_checkpoint.txt
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas      4818 Oct 17 12:41 pilotlog.txt
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas   1177352 Oct 17 12:41 log.46771637._023429.job.log.1
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas       357 Oct 17 12:41 output.list
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas       620 Oct 17 12:41 runtime_log
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas   1576960 Oct 17 12:41 result.tar.gz
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas       660 Oct 17 12:41 x1XNDmPvvT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6GtNDm3vyDgm.diag
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas      8703 Oct 17 12:41 runtime_log.err
[2025-10-17 12:41:20] -rw-r--r-- 1 boincer umatlas     20839 Oct 17 12:41 stderr.txt
[2025-10-17 12:41:20] HITS file was successfully produced:
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas 207784582 Oct 17 12:39 shared/HITS.pool.root.1
[2025-10-17 12:41:20]  *** Contents of shared directory: ***
[2025-10-17 12:41:20] total 428252
[2025-10-17 12:41:20] -rw-r--r-- 2 boincer umatlas 228566831 Oct 17 10:19 ATLAS.root_0
[2025-10-17 12:41:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 17 10:19 start_atlas.sh
[2025-10-17 12:41:20] -rw-r--r-- 2 boincer umatlas    569675 Oct 17 10:19 input.tar.gz
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas 207784582 Oct 17 12:39 HITS.pool.root.1
[2025-10-17 12:41:20] -rw------- 1 boincer umatlas   1576960 Oct 17 12:41 result.tar.gz
12:41:21 (23401): run_atlas exited; CPU time 61376.480585
12:41:21 (23401): called boinc_finish(0)

</stderr_txt>
]]>

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