Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-17 17:02:28 (5968): vboxwrapper version 26210
2025-10-17 17:02:28 (5968): BOINC client version: 8.0.2
2025-10-17 17:02:29 (5968): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-10-17 17:02:29 (5968): Successfully copied 'init_data.xml' to the shared directory.
2025-10-17 17:02:30 (5968): Create VM. (boinc_e673bbe0650acc1d, slot#2)
2025-10-17 17:02:30 (5968): Setting Memory Size for VM. (4400MB)
2025-10-17 17:02:31 (5968): Setting CPU Count for VM. (4)
2025-10-17 17:02:31 (5968): Setting Chipset Options for VM.
2025-10-17 17:02:31 (5968): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-17 17:02:31 (5968): Setting Boot Options for VM.
2025-10-17 17:02:32 (5968): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-17 17:02:32 (5968): Enabling VM Network Access.
2025-10-17 17:02:33 (5968): Disabling USB Support for VM.
2025-10-17 17:02:33 (5968): Disabling COM Port Support for VM.
2025-10-17 17:02:33 (5968): Disabling LPT Port Support for VM.
2025-10-17 17:02:34 (5968): Disabling Audio Support for VM.
2025-10-17 17:02:34 (5968): Disabling Clipboard Support for VM.
2025-10-17 17:02:34 (5968): Disabling Drag and Drop Support for VM.
2025-10-17 17:02:34 (5968): Adding storage controller(s) to VM.
2025-10-17 17:02:35 (5968): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-17 17:02:37 (5968): Adding VirtualBox Guest Additions to VM.
2025-10-17 17:02:37 (5968): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-17 17:02:38 (5968): forwarding host port 50625 to guest port 80
2025-10-17 17:02:38 (5968): Enabling remote desktop for VM.
2025-10-17 17:02:38 (5968): Enabling shared directory for VM.
2025-10-17 17:02:39 (5968): Starting VM using VBoxManage interface. (boinc_e673bbe0650acc1d, slot#2)
2025-10-17 17:02:46 (5968): Successfully started VM. (PID = '11852')
2025-10-17 17:02:46 (5968): Reporting VM Process ID to BOINC.
2025-10-17 17:02:46 (5968): Guest Log: BIOS: VirtualBox 7.0.12
2025-10-17 17:02:46 (5968): Guest Log: CPUID EDX: 0x178bfbff
2025-10-17 17:02:46 (5968): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-17 17:02:46 (5968): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-17 17:02:46 (5968): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-17 17:02:46 (5968): Detected: Web Application Enabled (http://localhost:50625)
2025-10-17 17:02:46 (5968): Detected: Remote Desktop Enabled (localhost:50626)
2025-10-17 17:02:46 (5968): Preference change detected
2025-10-17 17:02:46 (5968): Setting CPU throttle for VM. (100%)
2025-10-17 17:02:46 (5968): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-17 17:02:48 (5968): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-17 17:02:48 (5968): Guest Log: BIOS: Booting from Hard Disk...
2025-10-17 17:02:51 (5968): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-17 17:02:51 (5968): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-17 17:02:51 (5968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-17 17:02:59 (5968): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-17 17:02:59 (5968): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-17 17:03:09 (5968): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-17 17:03:09 (5968): Guest Log: 00:00:00.000218 main     Log opened 2025-10-17T17:03:07.762320000Z
2025-10-17 17:03:09 (5968): Guest Log: 00:00:00.000458 main     OS Product: Linux
2025-10-17 17:03:09 (5968): Guest Log: 00:00:00.000504 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-17 17:03:09 (5968): Guest Log: 00:00:00.000541 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-17 17:03:09 (5968): Guest Log: 00:00:00.000579 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-17 17:03:09 (5968): Guest Log: 00:00:00.000580 main     Process ID: 1324
2025-10-17 17:03:09 (5968): Guest Log: 00:00:00.000581 main     Package type: LINUX_64BITS_GENERIC
2025-10-17 17:03:09 (5968): Guest Log: 00:00:00.002112 main     5.2.32 r132073 started. Verbose level = 0
2025-10-17 17:03:09 (5968): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-17 17:03:09 (5968): Guest Log: [INFO] Mounting shared directory
2025-10-17 17:03:09 (5968): Guest Log: [INFO] Checking for init_data.xml
2025-10-17 17:03:19 (5968): Guest Log: 00:00:10.008885 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 539 696 000ns (GuestNow=1 760 713 399 229 563 000 ns GuestLast=1 760 720 587 769 259 000 ns fSetTimeLastLoop=true )
2025-10-17 17:05:03 (5968): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-17 17:05:03 (5968): Guest Log: [INFO] Detected branch: prod
2025-10-17 17:05:03 (5968): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-17 17:05:03 (5968): Guest Log: Copying input files
2025-10-17 17:05:05 (5968): Guest Log: Copied input files into RunAtlas.
2025-10-17 17:05:05 (5968): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-17 17:05:05 (5968): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-17 17:05:05 (5968): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-17 17:05:05 (5968): Guest Log: Further information can be found at the LHC@home message board.
2025-10-17 17:05:49 (5968): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-17 17:05:49 (5968): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-17 17:05:49 (5968): Guest Log: 2.6.3.0 1633 1 32184 151818 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-17 17:05:50 (5968): Guest Log: copied the webapp to /var/www
2025-10-17 17:05:50 (5968): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-17 17:05:50 (5968): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-17 17:05:51 (5968): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-17 17:05:51 (5968): Guest Log:  *** Starting ATLAS job. (PandaID=6848117823 taskID=46808926) ***
2025-10-17 17:08:49 (5968): VM state change detected. (old = 'running', new = 'paused')
2025-10-17 17:09:10 (5968): VM state change detected. (old = 'paused', new = 'running')
2025-10-17 17:13:22 (5968): Guest Log:  *** Job finished ***
2025-10-17 17:13:22 (5968): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:12:53,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:12:53,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:12:55,623 | INFO     | [monitor] cgroup control has ended
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:12:55,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180143146816)>', '<ExcThread(monitor, started 140179226466048)>']
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:12:56,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:12:56,743 | INFO     | [monitor] control thread has ended
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:00,809 | INFO     | all workflow threads have been joined
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:00,810 | INFO     | end of generic workflow (traces error code: 0)
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:00,810 | INFO     | traces error code: 0
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:00,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:00,970 [wrapper] ==== pilot stdout END ====
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:00,976 [wrapper] ==== wrapper stdout RESUME ====
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:00,981 [wrapper] pilotpid: 6035
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:00,987 [wrapper] Pilot exit status: 0
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:01,146 [wrapper] pandaids: 6848117823
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:01,224 [wrapper] cleanup supervisor_pilot  6041 6036
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:01,236 [wrapper] Test setup, not cleaning
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:01,242 [wrapper] apfmon messages muted
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:01,254 [wrapper] ==== wrapper stdout END ====
2025-10-17 17:13:22 (5968): Guest Log: 2025-10-17 15:13:01,260 [wrapper] ==== wrapper stderr END ====
2025-10-17 17:13:22 (5968): Guest Log:  *** Error codes and diagnostics ***
2025-10-17 17:13:22 (5968): Guest Log:     "exeErrorCode": 65,
2025-10-17 17:13:22 (5968): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-10-17 17:13:22 (5968): Guest Log:     "pilotErrorCode": 1305,
2025-10-17 17:13:22 (5968): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-10-17 17:13:22 (5968): Guest Log:  *** Listing of results directory ***
2025-10-17 17:13:22 (5968): Guest Log: total 3968
2025-10-17 17:13:22 (5968): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct 17 01:32 pilot3.tar.gz
2025-10-17 17:13:22 (5968): Guest Log: -rwx------. 1 atlas atlas   36292 Oct 17 02:18 runpilot2-wrapper.sh
2025-10-17 17:13:22 (5968): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct 17 02:18 queuedata.json
2025-10-17 17:13:22 (5968): Guest Log: -rwxr-xr-x. 1 atlas atlas    8165 Oct 17 15:05 init_data.xml
2025-10-17 17:13:22 (5968): Guest Log: -rwxr-xr-x. 1 atlas atlas  569671 Oct 17 15:05 input.tar.gz
2025-10-17 17:13:22 (5968): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct 17 15:05 start_atlas.sh
2025-10-17 17:13:22 (5968): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 17 15:05 EVNT.46808924._000103.pool.root.1 -> /data/./ATLAS.root_0
2025-10-17 17:13:22 (5968): Guest Log: -rw-r--r--. 1 atlas atlas    2543 Oct 17 15:05 pandaJob.out
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas  976733 Oct 17 15:07 agis_schedconf.cvmfs.json
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas 1560740 Oct 17 15:07 agis_ddmendpoints.agis.ALL.json
2025-10-17 17:13:22 (5968): Guest Log: drwx------. 5 atlas atlas    4096 Oct 17 15:07 pilot3
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas    1007 Oct 17 15:10 memory_monitor_summary.json
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas   21846 Oct 17 15:10 log.46808926._001202.job.log.tgz.1
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas    8463 Oct 17 15:12 heartbeat.json
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas      95 Oct 17 15:12 pilot_heartbeat.json
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas    4991 Oct 17 15:13 pilotlog.txt
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas   93283 Oct 17 15:13 log.46808926._001202.job.log.1
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas     188 Oct 17 15:13 output.list
2025-10-17 17:13:22 (5968): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 17 15:13 runtime_log
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas  133120 Oct 17 15:13 result.tar.gz
2025-10-17 17:13:22 (5968): Guest Log: -rw-r--r--. 1 atlas atlas    8513 Oct 17 15:13 runtime_log.err
2025-10-17 17:13:22 (5968): Guest Log: -rw-------. 1 atlas atlas     651 Oct 17 15:13 2EBNDmoDpT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiSsNDmgJjgRn.diag
2025-10-17 17:13:22 (5968): Guest Log: Looking for outputfile HITS.46808926._001202.pool.root.1
2025-10-17 17:13:22 (5968): Guest Log: No HITS file was produced
2025-10-17 17:13:22 (5968): Guest Log: Successfully finished the ATLAS job!
2025-10-17 17:13:22 (5968): Guest Log: Copying the results back to the shared directory!
2025-10-17 17:13:22 (5968): Guest Log:  *** Contents of shared directory: ***
2025-10-17 17:13:22 (5968): Guest Log: total 224088
2025-10-17 17:13:22 (5968): Guest Log: -rwxrwxrwx. 1 root root 228729213 Oct 17 15:02 ATLAS.root_0
2025-10-17 17:13:22 (5968): Guest Log: -rwxrwxrwx. 1 root root      8165 Oct 17 15:02 init_data.xml
2025-10-17 17:13:22 (5968): Guest Log: -rwxrwxrwx. 1 root root    569671 Oct 17 14:08 input.tar.gz
2025-10-17 17:13:22 (5968): Guest Log: -rwxrwxrwx. 1 root root    133120 Oct 17  2025 result.tar.gz
2025-10-17 17:13:22 (5968): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 17 14:08 start_atlas.sh
2025-10-17 17:13:22 (5968): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-17 17:13:22 (5968): VM Completion File Detected.
2025-10-17 17:13:22 (5968): Powering off VM.
2025-10-17 17:13:22 (5968): Successfully stopped VM.
2025-10-17 17:13:22 (5968): Deregistering VM. (boinc_e673bbe0650acc1d, slot#2)
2025-10-17 17:13:22 (5968): Removing network bandwidth throttle group from VM.
2025-10-17 17:13:23 (5968): Removing VM from VirtualBox.
2025-10-17 17:13:28 (5968): called boinc_finish(0)

</stderr_txt>
]]>

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