Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:33:42 (1125707): wrapper (7.7.26015): starting
05:33:42 (1125707): wrapper: running run_atlas (--nthreads 12)
[2025-10-17 05:33:42] Arguments: --nthreads 12
[2025-10-17 05:33:42] Threads: 12
[2025-10-17 05:33:42] Checking for CVMFS
[2025-10-17 05:33:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 05:33:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 05:33:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 05:33:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 05:33:43] 2.11.5.0 2672 38700 229116 151815 0 437 43502302 45568000 18395 130560 0 425157454 99.869 173536546 23368 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-17 05:33:43] CVMFS is ok
[2025-10-17 05:33:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 05:33:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 05:33:43] Further information can be found at the LHC@home message board.
[2025-10-17 05:33:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 05:33:43] Checking for apptainer binary...
[2025-10-17 05:33:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 05:33:43] Running /usr/bin/apptainer --version
[2025-10-17 05:33:43] apptainer version 1.4.1-1.el9
[2025-10-17 05:33:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 05:33:43] wns0046.triumf.lcg
[2025-10-17 05:33:43] apptainer works
[2025-10-17 05:33:43] Set ATHENA_PROC_NUMBER=12
[2025-10-17 05:33:43] Set ATHENA_CORE_NUMBER=12
[2025-10-17 05:33:43] Starting ATLAS job with PandaID=6847357004
[2025-10-17 05:33:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 05:37:01]  *** The last 200 lines of the pilot log: ***
[2025-10-17 05:37:01] 2025-10-17 12:36:29,682 | WARNING  | found no stored workdir sizes
[2025-10-17 05:37:01] 2025-10-17 12:36:29,682 | INFO     | will not add max space = 0 B to job metrics
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | WARNING  | wrong length of table data, x=[1760704455.0], y=[1079.0] (must be same and length>=4)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | could have reported an average CPU frequency of 2735 MHz (4 samples)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | ..............................
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . Timing measurements:
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . get job = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . initial setup = 2 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . payload setup = 4 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . stage-in = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . payload execution = 14 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . stage-out = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . log creation = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | ..............................
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-17 05:37:01] 2025-10-17 12:36:29,684 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6847357004/pilotlog.txt
[2025-10-17 05:37:01] 2025-10-17 12:36:29,695 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-17 05:37:01] - Log from pilotlog.txt -
[2025-10-17 05:37:01] 2025-10-17 12:36:29,681 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 05:37:01] 2025-10-17 12:36:29,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 05:37:01] 2025-10-17 12:36:29,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 05:37:01] 2025-10-17 12:36:29,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 05:37:01] 2025-10-17 12:36:29,682 | WARNING  | found no stored workdir sizes
[2025-10-17 05:37:01] 2025-10-17 12:36:29,682 | INFO     | will not add max space = 0 B to job metrics
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | WARNING  | wrong length of table data, x=[1760704455.0], y=[1079.0] (must be same and length>=4)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | could have reported an average CPU frequency of 2735 MHz (4 samples)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | ..............................
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . Timing measurements:
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . get job = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . initial setup = 2 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . payload setup = 4 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . stage-in = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . payload execution = 14 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . stage-out = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . log creation = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | ..............................
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-17 05:37:01] 2025-10-17 12:36:29,684 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6847357004/pilotlog.txt
[2025-10-17 05:37:01] 2025-10-17 12:36:29,695 | WARNING  | 
[2025-10-17 05:37:01] [begin log extracts]
[2025-10-17 05:37:01] - Log from pilotlog.txt -
[2025-10-17 05:37:01] 2025-10-17 12:36:29,681 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 05:37:01] 2025-10-17 12:36:29,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 05:37:01] 2025-10-17 12:36:29,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 05:37:01] 2025-10-17 12:36:29,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 05:37:01] 2025-10-17 12:36:29,682 | WARNING  | found no stored workdir sizes
[2025-10-17 05:37:01] 2025-10-17 12:36:29,682 | INFO     | will not add max space = 0 B to job metrics
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | WARNING  | wrong length of table data, x=[1760704455.0], y=[1079.0] (must be same and length>=4)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | could have reported an average CPU frequency of 2735 MHz (4 samples)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | ..............................
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . Timing measurements:
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . get job = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . initial setup = 2 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . payload setup = 4 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . stage-in = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . payload execution = 14 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . stage-out = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | . log creation = 0 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | ..............................
[2025-10-17 05:37:01] 2025-10-17 12:36:29,683 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-17 05:37:01] 2025-10-17 12:36:29,684 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6847357004/pilotlog.txt
[2025-10-17 05:37:01] [end log extracts]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,695 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,696 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | 
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | job summary report
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | --------------------------------------------------
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | PanDA job id: 6847357004
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | task id: 46771637
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-17 05:34:21,486 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | pilot state: failed 
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | transexitcode: 65
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | exeerrorcode: 65
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | exitcode: 65
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | cpuconsumptiontime: 16 s
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | nevents: 0
[2025-10-17 05:37:01] 2025-10-17 12:36:29,760 | INFO     | neventsw: 0
[2025-10-17 05:37:01] 2025-10-17 12:36:29,761 | INFO     | pid: 1136607
[2025-10-17 05:37:01] 2025-10-17 12:36:29,761 | INFO     | pgrp: 1136607
[2025-10-17 05:37:01] 2025-10-17 12:36:29,761 | INFO     | corecount: 12
[2025-10-17 05:37:01] 2025-10-17 12:36:29,761 | INFO     | event service: False
[2025-10-17 05:37:01] 2025-10-17 12:36:29,761 | INFO     | sizes: {0: 2348923, 4: 2349185, 11: 2349213, 23: 2376582, 24: 2376582, 144: 2376748}
[2025-10-17 05:37:01] 2025-10-17 12:36:29,761 | INFO     | --------------------------------------------------
[2025-10-17 05:37:01] 2025-10-17 12:36:29,761 | INFO     | 
[2025-10-17 05:37:01] 2025-10-17 12:36:29,762 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,777 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,777 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 05:37:01] 2025-10-17 12:36:29,777 | INFO     | job 6847357004 has completed (purged errors)
[2025-10-17 05:37:01] 2025-10-17 12:36:29,777 | INFO     | overall cleanup function is called
[2025-10-17 05:37:01] 2025-10-17 12:36:30,782 | INFO     | --- collectZombieJob: --- 10, [1136607]
[2025-10-17 05:37:01] 2025-10-17 12:36:30,783 | INFO     | zombie collector waiting for pid 1136607
[2025-10-17 05:37:01] 2025-10-17 12:36:30,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 05:37:01] 2025-10-17 12:36:30,783 | INFO     | collected zombie processes
[2025-10-17 05:37:01] 2025-10-17 12:36:30,783 | INFO     | will attempt to kill all subprocesses of pid=1136607
[2025-10-17 05:37:01] 2025-10-17 12:36:30,956 | INFO     | process IDs to be killed: [1136607] (in reverse order)
[2025-10-17 05:37:01] 2025-10-17 12:36:31,045 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 05:37:01] 2025-10-17 12:36:31,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 05:37:01] 2025-10-17 12:36:31,053 | INFO     | did not find any defunct processes belonging to 1136607
[2025-10-17 05:37:01] 2025-10-17 12:36:31,060 | INFO     | did not find any defunct processes belonging to 1136607
[2025-10-17 05:37:01] 2025-10-17 12:36:31,060 | INFO     | ready for new job
[2025-10-17 05:37:01] 2025-10-17 12:36:31,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 05:37:01] 2025-10-17 12:36:31,062 | INFO     | ***************************************
[2025-10-17 05:37:01] 2025-10-17 12:36:31,062 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 05:37:01] 2025-10-17 12:36:31,062 | INFO     | ***************************************
[2025-10-17 05:37:01] 2025-10-17 12:36:31,062 | INFO     | 
[2025-10-17 05:37:01] 2025-10-17 12:36:31,064 | INFO     | architecture information:
[2025-10-17 05:37:01] 2025-10-17 12:36:31,064 | INFO     | executing command: cat /etc/os-release
[2025-10-17 05:37:01] 2025-10-17 12:36:31,076 | INFO     | cat /etc/os-release:
[2025-10-17 05:37:01] NAME="CentOS Linux"
[2025-10-17 05:37:01] VERSION="7 (Core)"
[2025-10-17 05:37:01] ID="centos"
[2025-10-17 05:37:01] ID_LIKE="rhel fedora"
[2025-10-17 05:37:01] VERSION_ID="7"
[2025-10-17 05:37:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 05:37:01] ANSI_COLOR="0;31"
[2025-10-17 05:37:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 05:37:01] HOME_URL="https://www.centos.org/"
[2025-10-17 05:37:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 05:37:01] 
[2025-10-17 05:37:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 05:37:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 05:37:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 05:37:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 05:37:01] 
[2025-10-17 05:37:01] 2025-10-17 12:36:31,076 | INFO     | ***************************************
[2025-10-17 05:37:01] 2025-10-17 12:36:31,579 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-17 05:37:01] 2025-10-17 12:36:31,590 | INFO     | sufficient remaining disk space (1891924705280 B)
[2025-10-17 05:37:01] 2025-10-17 12:36:31,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 05:37:01] 2025-10-17 12:36:31,591 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 05:37:01] 2025-10-17 12:36:31,591 | INFO     | update_server=False
[2025-10-17 05:37:01] 2025-10-17 12:36:31,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 05:37:01] 2025-10-17 12:36:31,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 05:37:01] 2025-10-17 12:36:31,914 | INFO     | all job control threads have been joined
[2025-10-17 05:37:01] 2025-10-17 12:36:31,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 05:37:01] 2025-10-17 12:36:31,965 | INFO     | aborting loop
[2025-10-17 05:37:01] 2025-10-17 12:36:32,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 05:37:01] 2025-10-17 12:36:32,526 | INFO     | all payload control threads have been joined
[2025-10-17 05:37:01] 2025-10-17 12:36:32,595 | INFO     | [job] retrieve thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:32,596 | INFO     | [job] queue monitor thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:32,690 | INFO     | all data control threads have been joined
[2025-10-17 05:37:01] 2025-10-17 12:36:32,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 05:37:01] 2025-10-17 12:36:32,914 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:32,919 | INFO     | [job] control thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:32,950 | INFO     | [data] copytool_in thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:32,969 | INFO     | [job] job monitor thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:33,207 | INFO     | [payload] failed_post thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:33,532 | INFO     | [payload] control thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:33,696 | INFO     | [data] control thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:33,696 | INFO     | [job] validate thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:33,799 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:33,927 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:33,996 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:34,130 | INFO     | [data] copytool_out thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:34,165 | INFO     | [payload] validate_post thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:36,920 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 05:37:01] 2025-10-17 12:36:51,533 | INFO     | [monitor] cgroup control has ended
[2025-10-17 05:37:01] 2025-10-17 12:36:53,262 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019422259008)>', '<ExcThread(monitor, started 140018727241472)>']
[2025-10-17 05:37:01] 2025-10-17 12:36:58,287 | INFO     | all workflow threads have been joined
[2025-10-17 05:37:01] 2025-10-17 12:36:58,287 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 05:37:01] 2025-10-17 12:36:58,287 | INFO     | traces error code: 0
[2025-10-17 05:37:01] 2025-10-17 12:36:58,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 05:37:01] 2025-10-17 12:37:01,517 | INFO     | PID=1129454 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-17 05:37:01] 2025-10-17 12:37:01,517 | INFO     | .. there are 28 such processes running
[2025-10-17 05:37:01] 2025-10-17 12:37:01,518 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 05:37:01] 2025-10-17 12:37:01,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 05:37:01] 2025-10-17 12:37:01,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 05:37:01] 2025-10-17 12:37:01,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 05:37:01] 2025-10-17 12:37:01,518 | CRITICAL | thread 'MainThread' is not alive
[2025-10-17 05:37:01] 2025-10-17 12:37:01,518 | INFO     | [monitor] control thread has ended
[2025-10-17 05:37:01] 2025-10-17 12:37:01,657 [wrapper] ==== pilot stdout END ====
[2025-10-17 05:37:01] 2025-10-17 12:37:01,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 05:37:01] 2025-10-17 12:37:01,663 [wrapper] pilotpid: 1129454
[2025-10-17 05:37:01] 2025-10-17 12:37:01,665 [wrapper] Pilot exit status: 0
[2025-10-17 05:37:01] 2025-10-17 12:37:01,673 [wrapper] pandaids: 6847357004
[2025-10-17 05:37:01] 2025-10-17 12:37:01,715 [wrapper] cleanup supervisor_pilot 1129460 1129455
[2025-10-17 05:37:01] 2025-10-17 12:37:01,717 [wrapper] Test setup, not cleaning
[2025-10-17 05:37:01] 2025-10-17 12:37:01,719 [wrapper] apfmon messages muted
[2025-10-17 05:37:01] 2025-10-17 12:37:01,720 [wrapper] ==== wrapper stdout END ====
[2025-10-17 05:37:01] 2025-10-17 12:37:01,722 [wrapper] ==== wrapper stderr END ====
[2025-10-17 05:37:01]  *** Error codes and diagnostics ***
[2025-10-17 05:37:01]     "exeErrorCode": 65,
[2025-10-17 05:37:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-17 05:37:01]     "pilotErrorCode": 1305,
[2025-10-17 05:37:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-17 05:37:01]  *** Listing of results directory ***
[2025-10-17 05:37:01] total 228456
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc    557409 Oct 17 03:09 pilot3.tar.gz
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc      5112 Oct 17 03:14 queuedata.json
[2025-10-17 05:37:01] -rwx------. 1 boinc boinc     36292 Oct 17 03:16 runpilot2-wrapper.sh
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc       100 Oct 17 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 05:37:01] -rwxr-xr-x. 1 boinc boinc      7986 Oct 17 05:33 run_atlas
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc       105 Oct 17 05:33 job.xml
[2025-10-17 05:37:01] -rw-r--r--. 2 boinc boinc 229827193 Oct 17 05:33 EVNT.46771634._000909.pool.root.1
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc      6594 Oct 17 05:33 init_data.xml
[2025-10-17 05:37:01] -rw-r--r--. 2 boinc boinc     15120 Oct 17 05:33 start_atlas.sh
[2025-10-17 05:37:01] drwxrwx--x. 2 boinc boinc      4096 Oct 17 05:33 shared
[2025-10-17 05:37:01] -rw-r--r--. 2 boinc boinc    569681 Oct 17 05:33 input.tar.gz
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc         0 Oct 17 05:33 boinc_lockfile
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc      2556 Oct 17 05:33 pandaJob.out
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc    976741 Oct 17 05:33 agis_schedconf.cvmfs.json
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc   1560740 Oct 17 05:33 agis_ddmendpoints.agis.ALL.json
[2025-10-17 05:37:01] drwx------. 5 boinc boinc      4096 Oct 17 05:33 pilot3
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc       521 Oct 17 05:34 boinc_task_state.xml
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc       951 Oct 17 05:34 memory_monitor_summary.json
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc     20931 Oct 17 05:34 log.46771637._024219.job.log.tgz.1
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc      8386 Oct 17 05:36 heartbeat.json
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc        22 Oct 17 05:36 wrapper_checkpoint.txt
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc      8192 Oct 17 05:36 boinc_mmap_file
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc        95 Oct 17 05:37 pilot_heartbeat.json
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc       893 Oct 17 05:37 pilotlog.txt
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc     82232 Oct 17 05:37 log.46771637._024219.job.log.1
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc       188 Oct 17 05:37 output.list
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc       620 Oct 17 05:37 runtime_log
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc    122880 Oct 17 05:37 result.tar.gz
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc      8528 Oct 17 05:37 runtime_log.err
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc       644 Oct 17 05:37 mn9KDmXgwT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmk2ZMDmjUXOMm.diag
[2025-10-17 05:37:01] -rw-r--r--. 1 boinc boinc     21612 Oct 17 05:37 stderr.txt
[2025-10-17 05:37:01] No HITS result produced
[2025-10-17 05:37:01]  *** Contents of shared directory: ***
[2025-10-17 05:37:01] total 225144
[2025-10-17 05:37:01] -rw-r--r--. 2 boinc boinc 229827193 Oct 17 05:33 ATLAS.root_0
[2025-10-17 05:37:01] -rw-r--r--. 2 boinc boinc     15120 Oct 17 05:33 start_atlas.sh
[2025-10-17 05:37:01] -rw-r--r--. 2 boinc boinc    569681 Oct 17 05:33 input.tar.gz
[2025-10-17 05:37:01] -rw-------. 1 boinc boinc    122880 Oct 17 05:37 result.tar.gz
05:37:02 (1125707): run_atlas exited; CPU time 20.624689
05:37:02 (1125707): called boinc_finish(0)

</stderr_txt>
]]>

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