Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:41:28 (11774): wrapper (7.7.26015): starting
05:41:28 (11774): wrapper: running run_atlas (--nthreads 8)
[2025-10-17 05:41:28] Arguments: --nthreads 8
[2025-10-17 05:41:28] Threads: 8
[2025-10-17 05:41:28] Checking for CVMFS
[2025-10-17 05:41:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 05:41:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 05:41:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 05:41:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 05:41:29] 2.11.2.0 2765 9479 79696 151808 3 192 16491650 20275201 875 130560 0 5324839 99.968 630399 38532 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-17 05:41:29] CVMFS is ok
[2025-10-17 05:41:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 05:41:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 05:41:29] Further information can be found at the LHC@home message board.
[2025-10-17 05:41:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 05:41:29] Checking for apptainer binary...
[2025-10-17 05:41:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 05:41:29] Running /usr/bin/apptainer --version
[2025-10-17 05:41:29] apptainer version 1.3.2-1.el7
[2025-10-17 05:41:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 05:41:30] c-204-21.aglt2.org
[2025-10-17 05:41:30] apptainer works
[2025-10-17 05:41:30] Set ATHENA_PROC_NUMBER=8
[2025-10-17 05:41:30] Set ATHENA_CORE_NUMBER=8
[2025-10-17 05:41:30] Starting ATLAS job with PandaID=6848150971
[2025-10-17 05:41:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 08:04:03]  *** The last 200 lines of the pilot log: ***
[2025-10-17 08:04:03] 2025-10-17 12:03:04,936 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 08:04:03] 2025-10-17 12:03:04,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 08:04:03] 2025-10-17 12:03:04,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 08:04:03] 2025-10-17 12:03:04,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 08:04:03] 2025-10-17 12:03:04,939 | INFO     | fitting pss+swap vs Time
[2025-10-17 08:04:03] 2025-10-17 12:03:04,939 | INFO     | sum of square deviations: 832722590.0
[2025-10-17 08:04:03] 2025-10-17 12:03:04,940 | INFO     | sum of deviations: -10029636470.000006
[2025-10-17 08:04:03] 2025-10-17 12:03:04,940 | INFO     | mean x: 1760698338.0
[2025-10-17 08:04:03] 2025-10-17 12:03:04,940 | INFO     | mean y: 2659731.856115108
[2025-10-17 08:04:03] 2025-10-17 12:03:04,940 | INFO     | -- intersect: 21209198950.96532
[2025-10-17 08:04:03] 2025-10-17 12:03:04,941 | INFO     | intersect: 21209198950.96532
[2025-10-17 08:04:03] 2025-10-17 12:03:04,941 | INFO     | chi2: 2.506552330492239
[2025-10-17 08:04:03] 2025-10-17 12:03:04,941 | INFO     | sum of square deviations: 746051197.5
[2025-10-17 08:04:03] 2025-10-17 12:03:04,942 | INFO     | sum of deviations: 3038804334.4999943
[2025-10-17 08:04:03] 2025-10-17 12:03:04,942 | INFO     | mean x: 1760698185.5
[2025-10-17 08:04:03] 2025-10-17 12:03:04,942 | INFO     | mean y: 2682232.8283582088
[2025-10-17 08:04:03] 2025-10-17 12:03:04,942 | INFO     | -- intersect: -7168966704.634375
[2025-10-17 08:04:03] 2025-10-17 12:03:04,942 | INFO     | intersect: -7168966704.634375
[2025-10-17 08:04:03] 2025-10-17 12:03:04,943 | INFO     | chi2: 1.6396530827348619
[2025-10-17 08:04:03] 2025-10-17 12:03:04,943 | INFO     | current chi2=1.6396530827348619 (change=34.5853241207669 %)
[2025-10-17 08:04:03] 2025-10-17 12:03:04,943 | INFO     | sum of square deviations: 665612480.0
[2025-10-17 08:04:03] 2025-10-17 12:03:04,944 | INFO     | sum of deviations: 6253559509.000002
[2025-10-17 08:04:03] 2025-10-17 12:03:04,944 | INFO     | mean x: 1760698033.0
[2025-10-17 08:04:03] 2025-10-17 12:03:04,944 | INFO     | mean y: 2688330.480620155
[2025-10-17 08:04:03] 2025-10-17 12:03:04,944 | INFO     | -- intersect: -16539414255.613844
[2025-10-17 08:04:03] 2025-10-17 12:03:04,944 | INFO     | intersect: -16539414255.613844
[2025-10-17 08:04:03] 2025-10-17 12:03:04,944 | INFO     | chi2: 1.6258927240755905
[2025-10-17 08:04:03] 2025-10-17 12:03:04,944 | INFO     | current chi2=1.6258927240755905 (change=0.8392237848459857 %)
[2025-10-17 08:04:03] 2025-10-17 12:03:04,945 | INFO     | right removable region: 128
[2025-10-17 08:04:03] 2025-10-17 12:03:04,945 | INFO     | sum of square deviations: 746051197.5
[2025-10-17 08:04:03] 2025-10-17 12:03:04,945 | INFO     | sum of deviations: -32357369053.0
[2025-10-17 08:04:03] 2025-10-17 12:03:04,946 | INFO     | mean x: 1760698490.5
[2025-10-17 08:04:03] 2025-10-17 12:03:04,946 | INFO     | mean y: 2698430.447761194
[2025-10-17 08:04:03] 2025-10-17 12:03:04,946 | INFO     | -- intersect: 76366855527.27824
[2025-10-17 08:04:03] 2025-10-17 12:03:04,946 | INFO     | intersect: 76366855527.27824
[2025-10-17 08:04:03] 2025-10-17 12:03:04,946 | INFO     | chi2: 1.086228543080087
[2025-10-17 08:04:03] 2025-10-17 12:03:04,946 | INFO     | current chi2=1.086228543080087 (change=56.664437846914105 %)
[2025-10-17 08:04:03] 2025-10-17 12:03:04,947 | INFO     | sum of square deviations: 665612480.0
[2025-10-17 08:04:03] 2025-10-17 12:03:04,947 | INFO     | sum of deviations: -34576219897.0
[2025-10-17 08:04:03] 2025-10-17 12:03:04,947 | INFO     | mean x: 1760698643.0
[2025-10-17 08:04:03] 2025-10-17 12:03:04,948 | INFO     | mean y: 2702537.201550388
[2025-10-17 08:04:03] 2025-10-17 12:03:04,948 | INFO     | -- intersect: 91464784877.84142
[2025-10-17 08:04:03] 2025-10-17 12:03:04,948 | INFO     | intersect: 91464784877.84142
[2025-10-17 08:04:03] 2025-10-17 12:03:04,948 | INFO     | chi2: 1.0286089304843806
[2025-10-17 08:04:03] 2025-10-17 12:03:04,948 | INFO     | current chi2=1.0286089304843806 (change=5.304557034776631 %)
[2025-10-17 08:04:03] 2025-10-17 12:03:04,948 | INFO     | left removable region: 20
[2025-10-17 08:04:03] 2025-10-17 12:03:04,948 | INFO     | sum of square deviations: 390582207.0
[2025-10-17 08:04:03] 2025-10-17 12:03:04,949 | INFO     | sum of deviations: -16627340655.000006
[2025-10-17 08:04:03] 2025-10-17 12:03:04,949 | INFO     | mean x: 1760698612.5
[2025-10-17 08:04:03] 2025-10-17 12:03:04,949 | INFO     | mean y: 2738018.462962963
[2025-10-17 08:04:03] 2025-10-17 12:03:04,949 | INFO     | -- intersect: 74956832434.81038
[2025-10-17 08:04:03] 2025-10-17 12:03:04,950 | INFO     | intersect: 74956832434.81038
[2025-10-17 08:04:03] 2025-10-17 12:03:04,950 | INFO     | chi2: 0.11988713249095016
[2025-10-17 08:04:03] 2025-10-17 12:03:04,950 | INFO     | -- intersect: 74956832434.81038
[2025-10-17 08:04:03] 2025-10-17 12:03:04,950 | INFO     | current memory leak: -42.57 B/s (using 108 data points, chi2=0.12)
[2025-10-17 08:04:03] 2025-10-17 12:03:04,950 | INFO     | could have reported an average CPU frequency of 2080 MHz (8 samples)
[2025-10-17 08:04:03] 2025-10-17 12:03:04,951 | INFO     | ..............................
[2025-10-17 08:04:03] 2025-10-17 12:03:04,951 | INFO     | . Timing measurements:
[2025-10-17 08:04:03] 2025-10-17 12:03:04,951 | INFO     | . get job = 0 s
[2025-10-17 08:04:03] 2025-10-17 12:03:04,951 | INFO     | . initial setup = 2 s
[2025-10-17 08:04:03] 2025-10-17 12:03:04,951 | INFO     | . payload setup = 5 s
[2025-10-17 08:04:03] 2025-10-17 12:03:04,951 | INFO     | . stage-in = 0 s
[2025-10-17 08:04:03] 2025-10-17 12:03:04,951 | INFO     | . payload execution = 8450 s
[2025-10-17 08:04:03] 2025-10-17 12:03:04,951 | INFO     | . stage-out = 0 s
[2025-10-17 08:04:03] 2025-10-17 12:03:04,951 | INFO     | . log creation = 0 s
[2025-10-17 08:04:03] 2025-10-17 12:03:04,952 | INFO     | ..............................
[2025-10-17 08:04:03] 2025-10-17 12:03:05,042 | INFO     | 
[2025-10-17 08:04:03] 2025-10-17 12:03:05,043 | INFO     | job summary report
[2025-10-17 08:04:03] 2025-10-17 12:03:05,043 | INFO     | --------------------------------------------------
[2025-10-17 08:04:03] 2025-10-17 12:03:05,043 | INFO     | PanDA job id: 6848150971
[2025-10-17 08:04:03] 2025-10-17 12:03:05,043 | INFO     | task id: 46808926
[2025-10-17 08:04:03] 2025-10-17 12:03:05,043 | INFO     | errors: (none)
[2025-10-17 08:04:03] 2025-10-17 12:03:05,043 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 08:04:03] 2025-10-17 12:03:05,044 | INFO     | pilot state: finished 
[2025-10-17 08:04:03] 2025-10-17 12:03:05,044 | INFO     | transexitcode: 0
[2025-10-17 08:04:03] 2025-10-17 12:03:05,044 | INFO     | exeerrorcode: 0
[2025-10-17 08:04:03] 2025-10-17 12:03:05,044 | INFO     | exeerrordiag: 
[2025-10-17 08:04:03] 2025-10-17 12:03:05,044 | INFO     | exitcode: 0
[2025-10-17 08:04:03] 2025-10-17 12:03:05,045 | INFO     | exitmsg: OK
[2025-10-17 08:04:03] 2025-10-17 12:03:05,045 | INFO     | cpuconsumptiontime: 62000 s
[2025-10-17 08:04:03] 2025-10-17 12:03:05,045 | INFO     | nevents: 400
[2025-10-17 08:04:03] 2025-10-17 12:03:05,045 | INFO     | neventsw: 0
[2025-10-17 08:04:03] 2025-10-17 12:03:05,045 | INFO     | pid: 22346
[2025-10-17 08:04:03] 2025-10-17 12:03:05,045 | INFO     | pgrp: 22346
[2025-10-17 08:04:03] 2025-10-17 12:03:05,045 | INFO     | corecount: 8
[2025-10-17 08:04:03] 2025-10-17 12:03:05,046 | INFO     | event service: False
[2025-10-17 08:04:03] 2025-10-17 12:03:05,046 | INFO     | sizes: {0: 2348739, 1: 2348938, 5: 2349200, 12: 2349256, 8460: 2377282, 8461: 2386464, 8467: 2386602}
[2025-10-17 08:04:03] 2025-10-17 12:03:05,046 | INFO     | --------------------------------------------------
[2025-10-17 08:04:03] 2025-10-17 12:03:05,046 | INFO     | 
[2025-10-17 08:04:03] 2025-10-17 12:03:05,046 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-17 08:04:03] 2025-10-17 12:03:05,077 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,077 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,077 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,078 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,078 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,078 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,080 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,080 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,080 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,080 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,081 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 08:04:03] 2025-10-17 12:03:05,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,081 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 08:04:03] 2025-10-17 12:03:05,082 | INFO     | job 6848150971 has completed (purged errors)
[2025-10-17 08:04:03] 2025-10-17 12:03:05,082 | INFO     | overall cleanup function is called
[2025-10-17 08:04:03] 2025-10-17 12:03:06,091 | INFO     | --- collectZombieJob: --- 10, [22346]
[2025-10-17 08:04:03] 2025-10-17 12:03:06,091 | INFO     | zombie collector waiting for pid 22346
[2025-10-17 08:04:03] 2025-10-17 12:03:06,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 08:04:03] 2025-10-17 12:03:06,091 | INFO     | collected zombie processes
[2025-10-17 08:04:03] 2025-10-17 12:03:06,092 | INFO     | will attempt to kill all subprocesses of pid=22346
[2025-10-17 08:04:03] 2025-10-17 12:03:06,185 | INFO     | process IDs to be killed: [22346] (in reverse order)
[2025-10-17 08:04:03] 2025-10-17 12:03:06,246 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 08:04:03] 2025-10-17 12:03:06,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 08:04:03] 2025-10-17 12:03:06,253 | INFO     | did not find any defunct processes belonging to 22346
[2025-10-17 08:04:03] 2025-10-17 12:03:06,256 | INFO     | did not find any defunct processes belonging to 22346
[2025-10-17 08:04:03] 2025-10-17 12:03:06,257 | INFO     | ready for new job
[2025-10-17 08:04:03] 2025-10-17 12:03:06,257 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 08:04:03] 2025-10-17 12:03:06,259 | INFO     | ***************************************
[2025-10-17 08:04:03] 2025-10-17 12:03:06,259 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 08:04:03] 2025-10-17 12:03:06,259 | INFO     | ***************************************
[2025-10-17 08:04:03] 2025-10-17 12:03:06,259 | INFO     | 
[2025-10-17 08:04:03] 2025-10-17 12:03:06,260 | INFO     | architecture information:
[2025-10-17 08:04:03] 2025-10-17 12:03:06,260 | INFO     | executing command: cat /etc/os-release
[2025-10-17 08:04:03] 2025-10-17 12:03:06,279 | INFO     | cat /etc/os-release:
[2025-10-17 08:04:03] NAME="CentOS Linux"
[2025-10-17 08:04:03] VERSION="7 (Core)"
[2025-10-17 08:04:03] ID="centos"
[2025-10-17 08:04:03] ID_LIKE="rhel fedora"
[2025-10-17 08:04:03] VERSION_ID="7"
[2025-10-17 08:04:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 08:04:03] ANSI_COLOR="0;31"
[2025-10-17 08:04:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 08:04:03] HOME_URL="https://www.centos.org/"
[2025-10-17 08:04:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 08:04:03] 
[2025-10-17 08:04:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 08:04:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 08:04:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 08:04:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 08:04:03] 
[2025-10-17 08:04:03] 2025-10-17 12:03:06,279 | INFO     | ***************************************
[2025-10-17 08:04:03] 2025-10-17 12:03:06,782 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-17 08:04:03] 2025-10-17 12:03:06,803 | INFO     | sufficient remaining disk space (18530435072 B)
[2025-10-17 08:04:03] 2025-10-17 12:03:06,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 08:04:03] 2025-10-17 12:03:06,804 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 08:04:03] 2025-10-17 12:03:06,805 | INFO     | update_server=False
[2025-10-17 08:04:03] 2025-10-17 12:03:06,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 08:04:03] 2025-10-17 12:03:06,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 08:04:03] 2025-10-17 12:03:06,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 08:04:03] 2025-10-17 12:03:06,806 | INFO     | aborting loop
[2025-10-17 08:04:03] 2025-10-17 12:03:07,034 | INFO     | all job control threads have been joined
[2025-10-17 08:04:03] 2025-10-17 12:03:07,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 08:04:03] 2025-10-17 12:03:07,164 | INFO     | all data control threads have been joined
[2025-10-17 08:04:03] 2025-10-17 12:03:07,677 | INFO     | all payload control threads have been joined
[2025-10-17 08:04:03] 2025-10-17 12:03:07,811 | INFO     | [job] retrieve thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:07,812 | INFO     | [job] queue monitor thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:07,812 | INFO     | [job] job monitor thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:08,034 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:08,040 | INFO     | [job] control thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:08,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:08,171 | INFO     | [data] control thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:08,298 | INFO     | [data] copytool_in thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:08,534 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:08,682 | INFO     | [payload] control thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:08,743 | INFO     | [payload] validate_post thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:08,811 | INFO     | [job] validate thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:09,128 | INFO     | [data] copytool_out thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:09,285 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:09,378 | INFO     | [payload] failed_post thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:09,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 08:04:03] 2025-10-17 12:03:13,715 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 08:04:03] 2025-10-17 12:03:36,305 | INFO     | PID=15551 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 08:04:03] 2025-10-17 12:03:36,306 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 08:04:03] 2025-10-17 12:03:36,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 08:04:03] 2025-10-17 12:03:36,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 08:04:03] 2025-10-17 12:03:56,651 | INFO     | [monitor] cgroup control has ended
[2025-10-17 08:04:03] 2025-10-17 12:03:57,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336493864768)>', '<ExcThread(monitor, started 140335816623872)>']
[2025-10-17 08:04:03] 2025-10-17 12:03:58,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 08:04:03] 2025-10-17 12:03:58,376 | INFO     | [monitor] control thread has ended
[2025-10-17 08:04:03] 2025-10-17 12:04:02,764 | INFO     | all workflow threads have been joined
[2025-10-17 08:04:03] 2025-10-17 12:04:02,764 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 08:04:03] 2025-10-17 12:04:02,765 | INFO     | traces error code: 0
[2025-10-17 08:04:03] 2025-10-17 12:04:02,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 08:04:03] 2025-10-17 12:04:02,880 [wrapper] ==== pilot stdout END ====
[2025-10-17 08:04:03] 2025-10-17 12:04:02,884 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 08:04:03] 2025-10-17 12:04:02,888 [wrapper] pilotpid: 15551
[2025-10-17 08:04:03] 2025-10-17 12:04:02,893 [wrapper] Pilot exit status: 0
[2025-10-17 08:04:03] 2025-10-17 12:04:02,913 [wrapper] pandaids: 6848150971
[2025-10-17 08:04:03] 2025-10-17 12:04:02,965 [wrapper] cleanup supervisor_pilot 23352 15552
[2025-10-17 08:04:03] 2025-10-17 12:04:02,970 [wrapper] Test setup, not cleaning
[2025-10-17 08:04:03] 2025-10-17 12:04:02,975 [wrapper] apfmon messages muted
[2025-10-17 08:04:03] 2025-10-17 12:04:02,980 [wrapper] ==== wrapper stdout END ====
[2025-10-17 08:04:03] 2025-10-17 12:04:02,985 [wrapper] ==== wrapper stderr END ====
[2025-10-17 08:04:03]  *** Error codes and diagnostics ***
[2025-10-17 08:04:03]     "exeErrorCode": 0,
[2025-10-17 08:04:03]     "exeErrorDiag": "",
[2025-10-17 08:04:03]     "pilotErrorCode": 0,
[2025-10-17 08:04:03]     "pilotErrorDiag": "",
[2025-10-17 08:04:03]  *** Listing of results directory ***
[2025-10-17 08:04:03] total 430396
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas    557409 Oct 16 23:33 pilot3.tar.gz
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas      5112 Oct 16 23:49 queuedata.json
[2025-10-17 08:04:03] -rwx------ 1 boincer umatlas     36292 Oct 16 23:51 runpilot2-wrapper.sh
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas       100 Oct 17 05:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 08:04:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct 17 05:41 run_atlas
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas       105 Oct 17 05:41 job.xml
[2025-10-17 08:04:03] -rw-r--r-- 2 boincer umatlas 225718504 Oct 17 05:41 EVNT.46808924._000058.pool.root.1
[2025-10-17 08:04:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 17 05:41 start_atlas.sh
[2025-10-17 08:04:03] drwxrwx--x 2 boincer umatlas      4096 Oct 17 05:41 shared
[2025-10-17 08:04:03] -rw-r--r-- 2 boincer umatlas    569672 Oct 17 05:41 input.tar.gz
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas         0 Oct 17 05:41 boinc_lockfile
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas      2543 Oct 17 05:41 pandaJob.out
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas    976718 Oct 17 05:41 agis_schedconf.cvmfs.json
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas   1560740 Oct 17 05:41 agis_ddmendpoints.agis.ALL.json
[2025-10-17 08:04:03] drwx------ 5 boincer umatlas      4096 Oct 17 05:41 pilot3
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas      5910 Oct 17 08:00 init_data.xml
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas 207949798 Oct 17 08:02 HITS.46808926._002199.pool.root.1
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas       530 Oct 17 08:02 boinc_task_state.xml
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas        95 Oct 17 08:02 pilot_heartbeat.json
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas      1066 Oct 17 08:02 memory_monitor_summary.json
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas    394835 Oct 17 08:02 log.46808926._002199.job.log.tgz.1
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas      7850 Oct 17 08:03 heartbeat.json
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas      8192 Oct 17 08:04 boinc_mmap_file
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas        27 Oct 17 08:04 wrapper_checkpoint.txt
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas      4746 Oct 17 08:04 pilotlog.txt
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas   1184674 Oct 17 08:04 log.46808926._002199.job.log.1
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas       357 Oct 17 08:04 output.list
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas       620 Oct 17 08:04 runtime_log
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas   1597440 Oct 17 08:04 result.tar.gz
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas       659 Oct 17 08:04 svVNDmRgqT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCdsNDmJBLB1n.diag
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas      8703 Oct 17 08:04 runtime_log.err
[2025-10-17 08:04:03] -rw-r--r-- 1 boincer umatlas     20849 Oct 17 08:04 stderr.txt
[2025-10-17 08:04:03] HITS file was successfully produced:
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas 207949798 Oct 17 08:02 shared/HITS.pool.root.1
[2025-10-17 08:04:03]  *** Contents of shared directory: ***
[2025-10-17 08:04:03] total 425644
[2025-10-17 08:04:03] -rw-r--r-- 2 boincer umatlas 225718504 Oct 17 05:41 ATLAS.root_0
[2025-10-17 08:04:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 17 05:41 start_atlas.sh
[2025-10-17 08:04:03] -rw-r--r-- 2 boincer umatlas    569672 Oct 17 05:41 input.tar.gz
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas 207949798 Oct 17 08:02 HITS.pool.root.1
[2025-10-17 08:04:03] -rw------- 1 boincer umatlas   1597440 Oct 17 08:04 result.tar.gz
08:04:05 (11774): run_atlas exited; CPU time 61931.050798
08:04:05 (11774): called boinc_finish(0)

</stderr_txt>
]]>

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