Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:02:37 (2097982): wrapper (7.7.26015): starting
07:02:37 (2097982): wrapper: running run_atlas (--nthreads 9)
[2025-10-17 07:02:37] Arguments: --nthreads 9
[2025-10-17 07:02:37] Threads: 9
[2025-10-17 07:02:37] Checking for CVMFS
[2025-10-17 07:02:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 07:02:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 07:02:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 07:02:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 07:02:38] 2.13.2.0 3047932 2633 272104 151808 2 1293 39528402 40960000 19534 16776704 0 41545612 99.821 17196750 34460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-17 07:02:38] CVMFS is ok
[2025-10-17 07:02:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 07:02:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 07:02:38] Further information can be found at the LHC@home message board.
[2025-10-17 07:02:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 07:02:38] Checking for apptainer binary...
[2025-10-17 07:02:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 07:02:38] Running /usr/bin/apptainer --version
[2025-10-17 07:02:38] apptainer version 1.4.3-1.el9
[2025-10-17 07:02:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 07:02:38] c8-7-5.aglt2.org
[2025-10-17 07:02:38] apptainer works
[2025-10-17 07:02:38] Set ATHENA_PROC_NUMBER=9
[2025-10-17 07:02:38] Set ATHENA_CORE_NUMBER=9
[2025-10-17 07:02:38] Starting ATLAS job with PandaID=6847337338
[2025-10-17 07:02:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 07:48:56]  *** The last 200 lines of the pilot log: ***
[2025-10-17 07:48:56]  replicas=None
[2025-10-17 07:48:56]  scope=mc23_13p6TeV
[2025-10-17 07:48:56]  status=None
[2025-10-17 07:48:56]  status_code=0
[2025-10-17 07:48:56]  storage_token=
[2025-10-17 07:48:56]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6847337338/log.46771637._019457.job.log.tgz.1
[2025-10-17 07:48:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/e1/log.46771637._019457.job.log.tgz.1
[2025-10-17 07:48:56]  workdir=None
[2025-10-17 07:48:56] ]
[2025-10-17 07:48:56] 2025-10-17 11:47:49,423 | INFO     | transferring file log.46771637._019457.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6847337338/log.46771637._019457.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-17 07:48:56] 2025-10-17 11:47:49,424 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6847337338/log.46771637._019457.job.log.tgz.1 /tmp/boinchome/slots/8/log.46771637._019457.job
[2025-10-17 07:48:56] 2025-10-17 11:47:49,442 | INFO     | adding to output.list: log.46771637._019457.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/e1/log.46771637._019457.job.log.tg
[2025-10-17 07:48:56] 2025-10-17 11:47:49,442 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-17 07:48:56] 2025-10-17 11:47:49,442 | INFO     | summary of transferred files:
[2025-10-17 07:48:56] 2025-10-17 11:47:49,442 | INFO     |  -- lfn=log.46771637._019457.job.log.tgz.1, status_code=0, status=transferred
[2025-10-17 07:48:56] 2025-10-17 11:47:49,443 | INFO     | stage-out finished correctly
[2025-10-17 07:48:56] 2025-10-17 11:47:50,170 | INFO     | time since job start (2703s) is within the limit (172800.0s)
[2025-10-17 07:48:56] 2025-10-17 11:47:50,749 | INFO     | monitor loop #200: job 0:6847337338 is in state 'finished'
[2025-10-17 07:48:56] 2025-10-17 11:47:50,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-17 07:48:56] 2025-10-17 11:47:51,492 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-17 07:48:56] 2025-10-17 11:47:52,176 | INFO     | time since job start (2705s) is within the limit (172800.0s)
[2025-10-17 07:48:56] 2025-10-17 11:47:53,251 | INFO     | monitor loop #201: job 0:6847337338 is in state 'finished'
[2025-10-17 07:48:56] 2025-10-17 11:47:53,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-17 07:48:56] 2025-10-17 11:47:53,296 | INFO     | job 6847337338 has state=finished
[2025-10-17 07:48:56] 2025-10-17 11:47:53,296 | INFO     | preparing for final server update for job 6847337338 in state='finished'
[2025-10-17 07:48:56] 2025-10-17 11:47:53,297 | INFO     | this job has now completed (state=finished)
[2025-10-17 07:48:56] 2025-10-17 11:47:53,297 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-17 07:48:56] 2025-10-17 11:47:53,297 | INFO     | log transfer has been attempted: DONE
[2025-10-17 07:48:56] 2025-10-17 11:47:53,297 | INFO     | job 6847337338 has finished - writing final server update
[2025-10-17 07:48:56] 2025-10-17 11:47:53,297 | INFO     | total number of processed events: 400 (read)
[2025-10-17 07:48:56] 2025-10-17 11:47:53,298 | INFO     | executing command: lscpu
[2025-10-17 07:48:56] 2025-10-17 11:47:53,361 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-17 07:48:56] 2025-10-17 11:47:54,181 | INFO     | time since job start (2707s) is within the limit (172800.0s)
[2025-10-17 07:48:56] 2025-10-17 11:47:55,755 | INFO     | monitor loop #202: job 0:6847337338 is in state 'finished'
[2025-10-17 07:48:56] 2025-10-17 11:47:55,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-17 07:48:56] 2025-10-17 11:47:56,187 | INFO     | time since job start (2709s) is within the limit (172800.0s)
[2025-10-17 07:48:56] 2025-10-17 11:47:57,703 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-17 07:48:56] 2025-10-17 11:47:57,708 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3739.8157265625023
[2025-10-17 07:48:56] 2025-10-17 11:47:57,722 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6847337338/memory_monitor_summary.json (trf name=prmon)
[2025-10-17 07:48:56] 2025-10-17 11:47:57,722 | INFO     | extracted standard info from prmon json
[2025-10-17 07:48:56] 2025-10-17 11:47:57,722 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 07:48:56] 2025-10-17 11:47:57,722 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 07:48:56] 2025-10-17 11:47:57,723 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 07:48:56] 2025-10-17 11:47:57,723 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 07:48:56] 2025-10-17 11:47:57,724 | INFO     | fitting pss+swap vs Time
[2025-10-17 07:48:56] 2025-10-17 11:47:57,724 | INFO     | sum of square deviations: 15695178.0
[2025-10-17 07:48:56] 2025-10-17 11:47:57,724 | INFO     | sum of deviations: -1299701746.0
[2025-10-17 07:48:56] 2025-10-17 11:47:57,724 | INFO     | mean x: 1760700393.0
[2025-10-17 07:48:56] 2025-10-17 11:47:57,724 | INFO     | mean y: 2298987.2162162163
[2025-10-17 07:48:56] 2025-10-17 11:47:57,724 | INFO     | -- intersect: 145804109897.86572
[2025-10-17 07:48:56] 2025-10-17 11:47:57,724 | INFO     | intersect: 145804109897.86572
[2025-10-17 07:48:56] 2025-10-17 11:47:57,724 | INFO     | chi2: 0.023989657167331018
[2025-10-17 07:48:56] 2025-10-17 11:47:57,724 | INFO     | -- intersect: 145804109897.86572
[2025-10-17 07:48:56] 2025-10-17 11:47:57,724 | INFO     | current memory leak: -82.81 B/s (using 37 data points, chi2=0.02)
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | could have reported an average CPU frequency of 3702 MHz (5 samples)
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | ..............................
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | . Timing measurements:
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | . get job = 0 s
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | . initial setup = 2 s
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | . payload setup = 4 s
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | . stage-in = 0 s
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | . payload execution = 2679 s
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | . stage-out = 0 s
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | . log creation = 0 s
[2025-10-17 07:48:56] 2025-10-17 11:47:57,725 | INFO     | ..............................
[2025-10-17 07:48:56] 2025-10-17 11:47:57,927 | INFO     | 
[2025-10-17 07:48:56] 2025-10-17 11:47:57,927 | INFO     | job summary report
[2025-10-17 07:48:56] 2025-10-17 11:47:57,927 | INFO     | --------------------------------------------------
[2025-10-17 07:48:56] 2025-10-17 11:47:57,927 | INFO     | PanDA job id: 6847337338
[2025-10-17 07:48:56] 2025-10-17 11:47:57,927 | INFO     | task id: 46771637
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | errors: (none)
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | pilot state: finished 
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | transexitcode: 0
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | exeerrorcode: 0
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | exeerrordiag: 
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | exitcode: 0
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | exitmsg: OK
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | cpuconsumptiontime: 22259 s
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | nevents: 400
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | neventsw: 0
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | pid: 2116835
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | pgrp: 2116835
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | corecount: 9
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | event service: False
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | sizes: {0: 2348812, 1: 2348954, 4: 2349216, 11: 2349244, 2687: 2374532, 2688: 2383530, 2690: 2383714, 2696: 2383940}
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | --------------------------------------------------
[2025-10-17 07:48:56] 2025-10-17 11:47:57,928 | INFO     | 
[2025-10-17 07:48:56] 2025-10-17 11:47:57,929 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-17 07:48:56] 2025-10-17 11:47:57,949 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,950 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 07:48:56] 2025-10-17 11:47:57,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,951 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 07:48:56] 2025-10-17 11:47:57,951 | INFO     | job 6847337338 has completed (purged errors)
[2025-10-17 07:48:56] 2025-10-17 11:47:57,951 | INFO     | overall cleanup function is called
[2025-10-17 07:48:56] 2025-10-17 11:47:58,958 | INFO     | --- collectZombieJob: --- 10, [2116835]
[2025-10-17 07:48:56] 2025-10-17 11:47:58,958 | INFO     | zombie collector waiting for pid 2116835
[2025-10-17 07:48:56] 2025-10-17 11:47:58,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 07:48:56] 2025-10-17 11:47:58,959 | INFO     | collected zombie processes
[2025-10-17 07:48:56] 2025-10-17 11:47:58,959 | INFO     | will attempt to kill all subprocesses of pid=2116835
[2025-10-17 07:48:56] 2025-10-17 11:47:59,391 | INFO     | process IDs to be killed: [2116835] (in reverse order)
[2025-10-17 07:48:56] 2025-10-17 11:47:59,550 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 07:48:56] 2025-10-17 11:47:59,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 07:48:56] 2025-10-17 11:47:59,574 | INFO     | did not find any defunct processes belonging to 2116835
[2025-10-17 07:48:56] 2025-10-17 11:47:59,599 | INFO     | did not find any defunct processes belonging to 2116835
[2025-10-17 07:48:56] 2025-10-17 11:47:59,600 | INFO     | ready for new job
[2025-10-17 07:48:56] 2025-10-17 11:47:59,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 07:48:56] 2025-10-17 11:47:59,601 | INFO     | ***************************************
[2025-10-17 07:48:56] 2025-10-17 11:47:59,601 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 07:48:56] 2025-10-17 11:47:59,601 | INFO     | ***************************************
[2025-10-17 07:48:56] 2025-10-17 11:47:59,601 | INFO     | 
[2025-10-17 07:48:56] 2025-10-17 11:47:59,619 | INFO     | architecture information:
[2025-10-17 07:48:56] 2025-10-17 11:47:59,620 | INFO     | executing command: cat /etc/os-release
[2025-10-17 07:48:56] 2025-10-17 11:47:59,634 | INFO     | cat /etc/os-release:
[2025-10-17 07:48:56] NAME="CentOS Linux"
[2025-10-17 07:48:56] VERSION="7 (Core)"
[2025-10-17 07:48:56] ID="centos"
[2025-10-17 07:48:56] ID_LIKE="rhel fedora"
[2025-10-17 07:48:56] VERSION_ID="7"
[2025-10-17 07:48:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 07:48:56] ANSI_COLOR="0;31"
[2025-10-17 07:48:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 07:48:56] HOME_URL="https://www.centos.org/"
[2025-10-17 07:48:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 07:48:56] 
[2025-10-17 07:48:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 07:48:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 07:48:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 07:48:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 07:48:56] 
[2025-10-17 07:48:56] 2025-10-17 11:47:59,635 | INFO     | ***************************************
[2025-10-17 07:48:56] 2025-10-17 11:48:00,137 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-17 07:48:56] 2025-10-17 11:48:00,157 | INFO     | sufficient remaining disk space (160996261888 B)
[2025-10-17 07:48:56] 2025-10-17 11:48:00,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 07:48:56] 2025-10-17 11:48:00,158 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 07:48:56] 2025-10-17 11:48:00,158 | INFO     | update_server=False
[2025-10-17 07:48:56] 2025-10-17 11:48:00,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 07:48:56] 2025-10-17 11:48:00,158 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 07:48:56] 2025-10-17 11:48:00,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 07:48:56] 2025-10-17 11:48:00,159 | INFO     | aborting loop
[2025-10-17 07:48:56] 2025-10-17 11:48:00,661 | INFO     | all payload control threads have been joined
[2025-10-17 07:48:56] 2025-10-17 11:48:00,698 | INFO     | all data control threads have been joined
[2025-10-17 07:48:56] 2025-10-17 11:48:01,158 | INFO     | all job control threads have been joined
[2025-10-17 07:48:56] 2025-10-17 11:48:01,163 | INFO     | [job] retrieve thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:01,164 | INFO     | [job] job monitor thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:01,270 | INFO     | [data] copytool_in thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:01,551 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:01,665 | INFO     | [payload] control thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:01,702 | INFO     | [data] control thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:01,903 | INFO     | [job] validate thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:01,996 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:02,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 07:48:56] 2025-10-17 11:48:02,107 | INFO     | [payload] failed_post thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:02,162 | INFO     | [job] control thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:02,162 | INFO     | [data] copytool_out thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:02,166 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:02,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:02,722 | INFO     | [payload] validate_post thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:02,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 07:48:56] 2025-10-17 11:48:03,800 | INFO     | [job] queue monitor thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:06,060 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 07:48:56] 2025-10-17 11:48:29,804 | INFO     | PID=2102970 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-17 07:48:56] 2025-10-17 11:48:29,804 | INFO     | .. there are 38 such processes running
[2025-10-17 07:48:56] 2025-10-17 11:48:29,805 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 07:48:56] 2025-10-17 11:48:29,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 07:48:56] 2025-10-17 11:48:29,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 07:48:56] 2025-10-17 11:48:51,190 | INFO     | [monitor] cgroup control has ended
[2025-10-17 07:48:56] 2025-10-17 11:48:51,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251836098368)>', '<ExcThread(monitor, started 140251200739072)>']
[2025-10-17 07:48:56] 2025-10-17 11:48:51,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 07:48:56] 2025-10-17 11:48:51,916 | INFO     | [monitor] control thread has ended
[2025-10-17 07:48:56] 2025-10-17 11:48:56,445 | INFO     | all workflow threads have been joined
[2025-10-17 07:48:56] 2025-10-17 11:48:56,447 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 07:48:56] 2025-10-17 11:48:56,447 | INFO     | traces error code: 0
[2025-10-17 07:48:56] 2025-10-17 11:48:56,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 07:48:56] 2025-10-17 11:48:56,556 [wrapper] ==== pilot stdout END ====
[2025-10-17 07:48:56] 2025-10-17 11:48:56,559 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 07:48:56] 2025-10-17 11:48:56,562 [wrapper] pilotpid: 2102970
[2025-10-17 07:48:56] 2025-10-17 11:48:56,564 [wrapper] Pilot exit status: 0
[2025-10-17 07:48:56] 2025-10-17 11:48:56,574 [wrapper] pandaids: 6847337338
[2025-10-17 07:48:56] 2025-10-17 11:48:56,697 [wrapper] cleanup supervisor_pilot 2946083 2102971
[2025-10-17 07:48:56] 2025-10-17 11:48:56,700 [wrapper] Test setup, not cleaning
[2025-10-17 07:48:56] 2025-10-17 11:48:56,702 [wrapper] apfmon messages muted
[2025-10-17 07:48:56] 2025-10-17 11:48:56,705 [wrapper] ==== wrapper stdout END ====
[2025-10-17 07:48:56] 2025-10-17 11:48:56,707 [wrapper] ==== wrapper stderr END ====
[2025-10-17 07:48:56]  *** Error codes and diagnostics ***
[2025-10-17 07:48:56]     "exeErrorCode": 0,
[2025-10-17 07:48:56]     "exeErrorDiag": "",
[2025-10-17 07:48:56]     "pilotErrorCode": 0,
[2025-10-17 07:48:56]     "pilotErrorDiag": "",
[2025-10-17 07:48:56]  *** Listing of results directory ***
[2025-10-17 07:48:56] total 432284
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 16 18:35 pilot3.tar.gz
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 16 18:57 queuedata.json
[2025-10-17 07:48:56] -rwx------. 1 boincer umatlas     36292 Oct 16 18:58 runpilot2-wrapper.sh
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas       100 Oct 17 07:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 07:48:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 17 07:02 run_atlas
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas       105 Oct 17 07:02 job.xml
[2025-10-17 07:48:56] -rw-r--r--. 2 boincer umatlas 229382163 Oct 17 07:02 EVNT.46771634._000707.pool.root.1
[2025-10-17 07:48:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 17 07:02 start_atlas.sh
[2025-10-17 07:48:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 17 07:02 shared
[2025-10-17 07:48:56] -rw-r--r--. 2 boincer umatlas    569676 Oct 17 07:02 input.tar.gz
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas         0 Oct 17 07:02 boinc_lockfile
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas      2556 Oct 17 07:02 pandaJob.out
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas    976718 Oct 17 07:02 agis_schedconf.cvmfs.json
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas   1560740 Oct 17 07:02 agis_ddmendpoints.agis.ALL.json
[2025-10-17 07:48:56] drwx------. 5 boincer umatlas      4096 Oct 17 07:02 pilot3
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas      7161 Oct 17 07:36 init_data.xml
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas       529 Oct 17 07:47 boinc_task_state.xml
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas 207899759 Oct 17 07:47 HITS.46771637._019457.pool.root.1
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas        95 Oct 17 07:47 pilot_heartbeat.json
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas      1033 Oct 17 07:47 memory_monitor_summary.json
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas    316339 Oct 17 07:47 log.46771637._019457.job.log.tgz.1
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas      7775 Oct 17 07:47 heartbeat.json
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 17 07:48 boinc_mmap_file
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas        27 Oct 17 07:48 wrapper_checkpoint.txt
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas      4825 Oct 17 07:48 pilotlog.txt
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas    417858 Oct 17 07:48 log.46771637._019457.job.log.1
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas       357 Oct 17 07:48 output.list
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas       620 Oct 17 07:48 runtime_log
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas    757760 Oct 17 07:48 result.tar.gz
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas       651 Oct 17 07:48 YxbNDmI6lT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS0rNDmf09HCn.diag
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas      8693 Oct 17 07:48 runtime_log.err
[2025-10-17 07:48:56] -rw-r--r--. 1 boincer umatlas     21865 Oct 17 07:48 stderr.txt
[2025-10-17 07:48:56] HITS file was successfully produced:
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas 207899759 Oct 17 07:47 shared/HITS.pool.root.1
[2025-10-17 07:48:56]  *** Contents of shared directory: ***
[2025-10-17 07:48:56] total 428356
[2025-10-17 07:48:56] -rw-r--r--. 2 boincer umatlas 229382163 Oct 17 07:02 ATLAS.root_0
[2025-10-17 07:48:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 17 07:02 start_atlas.sh
[2025-10-17 07:48:56] -rw-r--r--. 2 boincer umatlas    569676 Oct 17 07:02 input.tar.gz
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas 207899759 Oct 17 07:47 HITS.pool.root.1
[2025-10-17 07:48:56] -rw-------. 1 boincer umatlas    757760 Oct 17 07:48 result.tar.gz
07:48:58 (2097982): run_atlas exited; CPU time 22337.096625
07:48:58 (2097982): called boinc_finish(0)

</stderr_txt>
]]>

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