Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:12:21 (1871447): wrapper (7.7.26015): starting
05:12:21 (1871447): wrapper: running run_atlas (--nthreads 8)
[2025-10-17 05:12:21] Arguments: --nthreads 8
[2025-10-17 05:12:21] Threads: 8
[2025-10-17 05:12:21] Checking for CVMFS
[2025-10-17 05:12:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 05:12:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 05:12:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 05:12:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 05:12:21] 2.13.2.0 1756961 101431 324848 151808 0 601 29325901 32935936 14337 16776704 0 137331209 99.721 101349349 29502 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-17 05:12:21] CVMFS is ok
[2025-10-17 05:12:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 05:12:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 05:12:21] Further information can be found at the LHC@home message board.
[2025-10-17 05:12:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 05:12:21] Checking for apptainer binary...
[2025-10-17 05:12:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 05:12:21] Running /usr/bin/apptainer --version
[2025-10-17 05:12:21] apptainer version 1.4.3-1.el9
[2025-10-17 05:12:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 05:12:22] c-5-5.aglt2.org
[2025-10-17 05:12:22] apptainer works
[2025-10-17 05:12:22] Set ATHENA_PROC_NUMBER=8
[2025-10-17 05:12:22] Set ATHENA_CORE_NUMBER=8
[2025-10-17 05:12:22] Starting ATLAS job with PandaID=6847330004
[2025-10-17 05:12:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 08:31:30]  *** The last 200 lines of the pilot log: ***
[2025-10-17 08:31:30] 2025-10-17 12:30:55,969 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.155325
[2025-10-17 08:31:30] 2025-10-17 12:30:55,981 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6847330004/memory_monitor_summary.json (trf name=prmon)
[2025-10-17 08:31:30] 2025-10-17 12:30:55,983 | INFO     | extracted standard info from prmon json
[2025-10-17 08:31:30] 2025-10-17 12:30:55,983 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 08:31:30] 2025-10-17 12:30:55,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 08:31:30] 2025-10-17 12:30:55,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 08:31:30] 2025-10-17 12:30:55,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 08:31:30] 2025-10-17 12:30:56,018 | INFO     | fitting pss+swap vs Time
[2025-10-17 08:31:30] 2025-10-17 12:30:56,018 | INFO     | sum of square deviations: 2264106566.6649337
[2025-10-17 08:31:30] 2025-10-17 12:30:56,019 | INFO     | sum of deviations: -76556358329.53093
[2025-10-17 08:31:30] 2025-10-17 12:30:56,020 | INFO     | mean x: 1760698283.1494846
[2025-10-17 08:31:30] 2025-10-17 12:30:56,020 | INFO     | mean y: 2362380.1907216497
[2025-10-17 08:31:30] 2025-10-17 12:30:56,020 | INFO     | -- intersect: 59536949073.0484
[2025-10-17 08:31:30] 2025-10-17 12:30:56,020 | INFO     | intersect: 59536949073.0484
[2025-10-17 08:31:30] 2025-10-17 12:30:56,020 | INFO     | chi2: 3.0390135128968883
[2025-10-17 08:31:30] 2025-10-17 12:30:56,021 | INFO     | sum of square deviations: 2093577123.661375
[2025-10-17 08:31:30] 2025-10-17 12:30:56,022 | INFO     | sum of deviations: -57143325207.925934
[2025-10-17 08:31:30] 2025-10-17 12:30:56,022 | INFO     | mean x: 1760698130.6719577
[2025-10-17 08:31:30] 2025-10-17 12:30:56,022 | INFO     | mean y: 2379554.2592592593
[2025-10-17 08:31:30] 2025-10-17 12:30:56,026 | INFO     | -- intersect: 48059909767.437325
[2025-10-17 08:31:30] 2025-10-17 12:30:56,027 | INFO     | intersect: 48059909767.437325
[2025-10-17 08:31:30] 2025-10-17 12:30:56,027 | INFO     | chi2: 2.3711856795856625
[2025-10-17 08:31:30] 2025-10-17 12:30:56,027 | INFO     | current chi2=2.3711856795856625 (change=21.975151820717972 %)
[2025-10-17 08:31:30] 2025-10-17 12:30:56,027 | INFO     | right removable region: 188
[2025-10-17 08:31:30] 2025-10-17 12:30:56,028 | INFO     | sum of square deviations: 2093429010.201059
[2025-10-17 08:31:30] 2025-10-17 12:30:56,029 | INFO     | sum of deviations: -109504988165.69316
[2025-10-17 08:31:30] 2025-10-17 12:30:56,029 | INFO     | mean x: 1760698435.6931217
[2025-10-17 08:31:30] 2025-10-17 12:30:56,029 | INFO     | mean y: 2391612.005291005
[2025-10-17 08:31:30] 2025-10-17 12:30:56,029 | INFO     | -- intersect: 92102606343.15215
[2025-10-17 08:31:30] 2025-10-17 12:30:56,029 | INFO     | intersect: 92102606343.15215
[2025-10-17 08:31:30] 2025-10-17 12:30:56,030 | INFO     | chi2: 1.2366666366510328
[2025-10-17 08:31:30] 2025-10-17 12:30:56,030 | INFO     | current chi2=1.2366666366510328 (change=59.306971443104864 %)
[2025-10-17 08:31:30] 2025-10-17 12:30:56,034 | INFO     | sum of square deviations: 1931542315.4782648
[2025-10-17 08:31:30] 2025-10-17 12:30:56,036 | INFO     | sum of deviations: -111147304040.06526
[2025-10-17 08:31:30] 2025-10-17 12:30:56,036 | INFO     | mean x: 1760698588.2391305
[2025-10-17 08:31:30] 2025-10-17 12:30:56,037 | INFO     | mean y: 2393097.842391304
[2025-10-17 08:31:30] 2025-10-17 12:30:56,037 | INFO     | -- intersect: 101318786604.58896
[2025-10-17 08:31:30] 2025-10-17 12:30:56,037 | INFO     | intersect: 101318786604.58896
[2025-10-17 08:31:30] 2025-10-17 12:30:56,037 | INFO     | chi2: 1.116462629687729
[2025-10-17 08:31:30] 2025-10-17 12:30:56,038 | INFO     | current chi2=1.116462629687729 (change=9.720000798988444 %)
[2025-10-17 08:31:30] 2025-10-17 12:30:56,038 | INFO     | left removable region: 20
[2025-10-17 08:31:30] 2025-10-17 12:30:56,038 | INFO     | sum of square deviations: 1470052079.375
[2025-10-17 08:31:30] 2025-10-17 12:30:56,039 | INFO     | sum of deviations: -83475258339.75
[2025-10-17 08:31:30] 2025-10-17 12:30:56,039 | INFO     | mean x: 1760698710.375
[2025-10-17 08:31:30] 2025-10-17 12:30:56,039 | INFO     | mean y: 2406443.726190476
[2025-10-17 08:31:30] 2025-10-17 12:30:56,040 | INFO     | -- intersect: 99981707700.52579
[2025-10-17 08:31:30] 2025-10-17 12:30:56,040 | INFO     | intersect: 99981707700.52579
[2025-10-17 08:31:30] 2025-10-17 12:30:56,040 | INFO     | chi2: 0.4017911648667604
[2025-10-17 08:31:30] 2025-10-17 12:30:56,040 | INFO     | -- intersect: 99981707700.52579
[2025-10-17 08:31:30] 2025-10-17 12:30:56,040 | INFO     | current memory leak: -56.78 B/s (using 168 data points, chi2=0.40)
[2025-10-17 08:31:30] 2025-10-17 12:30:56,041 | INFO     | could have reported an average CPU frequency of 2602 MHz (10 samples)
[2025-10-17 08:31:30] 2025-10-17 12:30:56,041 | INFO     | ..............................
[2025-10-17 08:31:30] 2025-10-17 12:30:56,041 | INFO     | . Timing measurements:
[2025-10-17 08:31:30] 2025-10-17 12:30:56,041 | INFO     | . get job = 0 s
[2025-10-17 08:31:30] 2025-10-17 12:30:56,041 | INFO     | . initial setup = 3 s
[2025-10-17 08:31:30] 2025-10-17 12:30:56,042 | INFO     | . payload setup = 8 s
[2025-10-17 08:31:30] 2025-10-17 12:30:56,042 | INFO     | . stage-in = 0 s
[2025-10-17 08:31:30] 2025-10-17 12:30:56,042 | INFO     | . payload execution = 11810 s
[2025-10-17 08:31:30] 2025-10-17 12:30:56,042 | INFO     | . stage-out = 6 s
[2025-10-17 08:31:30] 2025-10-17 12:30:56,042 | INFO     | . log creation = 1 s
[2025-10-17 08:31:30] 2025-10-17 12:30:56,042 | INFO     | ..............................
[2025-10-17 08:31:30] 2025-10-17 12:30:56,890 | INFO     | 
[2025-10-17 08:31:30] 2025-10-17 12:30:56,915 | INFO     | job summary report
[2025-10-17 08:31:30] 2025-10-17 12:30:56,915 | INFO     | --------------------------------------------------
[2025-10-17 08:31:30] 2025-10-17 12:30:56,915 | INFO     | PanDA job id: 6847330004
[2025-10-17 08:31:30] 2025-10-17 12:30:56,915 | INFO     | task id: 46771637
[2025-10-17 08:31:30] 2025-10-17 12:30:56,915 | INFO     | errors: (none)
[2025-10-17 08:31:30] 2025-10-17 12:30:56,915 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 08:31:30] 2025-10-17 12:30:56,915 | INFO     | pilot state: finished 
[2025-10-17 08:31:30] 2025-10-17 12:30:56,916 | INFO     | transexitcode: 0
[2025-10-17 08:31:30] 2025-10-17 12:30:56,916 | INFO     | exeerrorcode: 0
[2025-10-17 08:31:30] 2025-10-17 12:30:56,916 | INFO     | exeerrordiag: 
[2025-10-17 08:31:30] 2025-10-17 12:30:56,916 | INFO     | exitcode: 0
[2025-10-17 08:31:30] 2025-10-17 12:30:56,916 | INFO     | exitmsg: OK
[2025-10-17 08:31:30] 2025-10-17 12:30:56,916 | INFO     | cpuconsumptiontime: 52318 s
[2025-10-17 08:31:30] 2025-10-17 12:30:56,916 | INFO     | nevents: 400
[2025-10-17 08:31:30] 2025-10-17 12:30:56,916 | INFO     | neventsw: 0
[2025-10-17 08:31:30] 2025-10-17 12:30:56,916 | INFO     | pid: 1883142
[2025-10-17 08:31:30] 2025-10-17 12:30:56,917 | INFO     | pgrp: 1883142
[2025-10-17 08:31:30] 2025-10-17 12:30:56,917 | INFO     | corecount: 8
[2025-10-17 08:31:30] 2025-10-17 12:30:56,917 | INFO     | event service: False
[2025-10-17 08:31:30] 2025-10-17 12:30:56,917 | INFO     | sizes: {0: 2348927, 6: 2349189, 11: 2349217, 11823: 2378946, 11824: 2378945, 11832: 2387999, 11833: 2388183, 11878: 2388377}
[2025-10-17 08:31:30] 2025-10-17 12:30:56,917 | INFO     | --------------------------------------------------
[2025-10-17 08:31:30] 2025-10-17 12:30:56,917 | INFO     | 
[2025-10-17 08:31:30] 2025-10-17 12:30:56,917 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-17 08:31:30] 2025-10-17 12:30:56,967 | INFO     | PID=1875921 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-17 08:31:30] 2025-10-17 12:30:56,968 | INFO     | .. there are 29 such processes running
[2025-10-17 08:31:30] 2025-10-17 12:30:56,999 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:56,999 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:56,999 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:56,999 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:56,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:56,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:56,999 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,000 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,000 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,014 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,015 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 08:31:30] 2025-10-17 12:30:57,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,015 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 08:31:30] 2025-10-17 12:30:57,015 | INFO     | job 6847330004 has completed (purged errors)
[2025-10-17 08:31:30] 2025-10-17 12:30:57,015 | INFO     | overall cleanup function is called
[2025-10-17 08:31:30] 2025-10-17 12:30:58,053 | INFO     | --- collectZombieJob: --- 10, [1883142]
[2025-10-17 08:31:30] 2025-10-17 12:30:58,053 | INFO     | zombie collector waiting for pid 1883142
[2025-10-17 08:31:30] 2025-10-17 12:30:58,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 08:31:30] 2025-10-17 12:30:58,054 | INFO     | collected zombie processes
[2025-10-17 08:31:30] 2025-10-17 12:30:58,054 | INFO     | will attempt to kill all subprocesses of pid=1883142
[2025-10-17 08:31:30] 2025-10-17 12:30:58,761 | INFO     | process IDs to be killed: [1883142] (in reverse order)
[2025-10-17 08:31:30] 2025-10-17 12:30:58,991 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 08:31:30] 2025-10-17 12:30:58,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 08:31:30] 2025-10-17 12:30:59,017 | INFO     | did not find any defunct processes belonging to 1883142
[2025-10-17 08:31:30] 2025-10-17 12:30:59,047 | INFO     | did not find any defunct processes belonging to 1883142
[2025-10-17 08:31:30] 2025-10-17 12:30:59,048 | INFO     | ready for new job
[2025-10-17 08:31:30] 2025-10-17 12:30:59,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 08:31:30] 2025-10-17 12:30:59,051 | INFO     | ***************************************
[2025-10-17 08:31:30] 2025-10-17 12:30:59,051 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 08:31:30] 2025-10-17 12:30:59,051 | INFO     | ***************************************
[2025-10-17 08:31:30] 2025-10-17 12:30:59,051 | INFO     | 
[2025-10-17 08:31:30] 2025-10-17 12:30:59,053 | INFO     | architecture information:
[2025-10-17 08:31:30] 2025-10-17 12:30:59,054 | INFO     | executing command: cat /etc/os-release
[2025-10-17 08:31:30] 2025-10-17 12:30:59,096 | INFO     | cat /etc/os-release:
[2025-10-17 08:31:30] NAME="CentOS Linux"
[2025-10-17 08:31:30] VERSION="7 (Core)"
[2025-10-17 08:31:30] ID="centos"
[2025-10-17 08:31:30] ID_LIKE="rhel fedora"
[2025-10-17 08:31:30] VERSION_ID="7"
[2025-10-17 08:31:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 08:31:30] ANSI_COLOR="0;31"
[2025-10-17 08:31:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 08:31:30] HOME_URL="https://www.centos.org/"
[2025-10-17 08:31:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 08:31:30] 
[2025-10-17 08:31:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 08:31:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 08:31:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 08:31:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 08:31:30] 
[2025-10-17 08:31:30] 2025-10-17 12:30:59,096 | INFO     | ***************************************
[2025-10-17 08:31:30] 2025-10-17 12:30:59,599 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-17 08:31:30] 2025-10-17 12:30:59,781 | INFO     | sufficient remaining disk space (75784781824 B)
[2025-10-17 08:31:30] 2025-10-17 12:30:59,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 08:31:30] 2025-10-17 12:30:59,782 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 08:31:30] 2025-10-17 12:30:59,782 | INFO     | update_server=False
[2025-10-17 08:31:30] 2025-10-17 12:30:59,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 08:31:30] 2025-10-17 12:30:59,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 08:31:30] 2025-10-17 12:30:59,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 08:31:30] 2025-10-17 12:31:00,068 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-17 08:31:30] 2025-10-17 12:31:00,069 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-17 08:31:30] 2025-10-17 12:31:00,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 08:31:30] 2025-10-17 12:31:00,069 | INFO     | will abort loop
[2025-10-17 08:31:30] 2025-10-17 12:31:00,286 | INFO     | all data control threads have been joined
[2025-10-17 08:31:30] 2025-10-17 12:31:00,576 | INFO     | all job control threads have been joined
[2025-10-17 08:31:30] 2025-10-17 12:31:00,788 | INFO     | [job] retrieve thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,066 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,073 | INFO     | [payload] validate_post thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,074 | INFO     | [job] job monitor thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,077 | INFO     | all payload control threads have been joined
[2025-10-17 08:31:30] 2025-10-17 12:31:01,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,293 | INFO     | [data] control thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,365 | INFO     | [monitor] cgroup control has ended
[2025-10-17 08:31:30] 2025-10-17 12:31:01,390 | INFO     | [payload] failed_post thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,538 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,565 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,582 | INFO     | [job] control thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,798 | INFO     | [data] copytool_out thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:01,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 08:31:30] 2025-10-17 12:31:01,974 | INFO     | [job] validate thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:02,088 | INFO     | [payload] control thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:02,249 | INFO     | [data] copytool_in thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:02,915 | INFO     | [job] queue monitor thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:03,821 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 08:31:30] 2025-10-17 12:31:05,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858005837632)>', '<ExcThread(monitor, started 139857657575168)>']
[2025-10-17 08:31:30] 2025-10-17 12:31:10,236 | INFO     | all workflow threads have been joined
[2025-10-17 08:31:30] 2025-10-17 12:31:10,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 08:31:30] 2025-10-17 12:31:10,237 | INFO     | traces error code: 0
[2025-10-17 08:31:30] 2025-10-17 12:31:10,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 08:31:30] 2025-10-17 12:31:29,949 | INFO     | PID=1875921 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-17 08:31:30] 2025-10-17 12:31:29,950 | INFO     | .. there are 29 such processes running
[2025-10-17 08:31:30] 2025-10-17 12:31:29,950 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 08:31:30] 2025-10-17 12:31:29,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 08:31:30] 2025-10-17 12:31:29,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 08:31:30] 2025-10-17 12:31:29,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 08:31:30] 2025-10-17 12:31:29,951 | INFO     | [monitor] control thread has ended
[2025-10-17 08:31:30] 2025-10-17 12:31:30,147 [wrapper] ==== pilot stdout END ====
[2025-10-17 08:31:30] 2025-10-17 12:31:30,150 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 08:31:30] 2025-10-17 12:31:30,153 [wrapper] pilotpid: 1875921
[2025-10-17 08:31:30] 2025-10-17 12:31:30,156 [wrapper] Pilot exit status: 0
[2025-10-17 08:31:30] 2025-10-17 12:31:30,315 [wrapper] pandaids: 6847330004
[2025-10-17 08:31:30] 2025-10-17 12:31:30,391 [wrapper] cleanup supervisor_pilot 3146271 1875922
[2025-10-17 08:31:30] 2025-10-17 12:31:30,426 [wrapper] Test setup, not cleaning
[2025-10-17 08:31:30] 2025-10-17 12:31:30,441 [wrapper] apfmon messages muted
[2025-10-17 08:31:30] 2025-10-17 12:31:30,457 [wrapper] ==== wrapper stdout END ====
[2025-10-17 08:31:30] 2025-10-17 12:31:30,503 [wrapper] ==== wrapper stderr END ====
[2025-10-17 08:31:30]  *** Error codes and diagnostics ***
[2025-10-17 08:31:30]     "exeErrorCode": 0,
[2025-10-17 08:31:30]     "exeErrorDiag": "",
[2025-10-17 08:31:30]     "pilotErrorCode": 0,
[2025-10-17 08:31:30]     "pilotErrorDiag": "",
[2025-10-17 08:31:30]  *** Listing of results directory ***
[2025-10-17 08:31:30] total 430572
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 16 15:33 pilot3.tar.gz
[2025-10-17 08:31:30] -rwx------. 1 boincer umatlas     36292 Oct 16 15:42 runpilot2-wrapper.sh
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 16 15:42 queuedata.json
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas       100 Oct 17 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 08:31:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 17 05:12 run_atlas
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas       105 Oct 17 05:12 job.xml
[2025-10-17 08:31:30] -rw-r--r--. 2 boincer umatlas 229936601 Oct 17 05:12 EVNT.46771634._000733.pool.root.1
[2025-10-17 08:31:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 17 05:12 start_atlas.sh
[2025-10-17 08:31:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 17 05:12 shared
[2025-10-17 08:31:30] -rw-r--r--. 2 boincer umatlas    569673 Oct 17 05:12 input.tar.gz
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas         0 Oct 17 05:12 boinc_lockfile
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas      2557 Oct 17 05:12 pandaJob.out
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas    976718 Oct 17 05:12 agis_schedconf.cvmfs.json
[2025-10-17 08:31:30] drwx------. 5 boincer umatlas      4096 Oct 17 05:12 pilot3
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas 203061417 Oct 17 08:28 HITS.46771637._017092.pool.root.1
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas       530 Oct 17 08:28 boinc_task_state.xml
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas      6659 Oct 17 08:29 init_data.xml
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas      1048 Oct 17 08:29 memory_monitor_summary.json
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas   1560740 Oct 17 08:30 agis_ddmendpoints.agis.ALL.json
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas    418526 Oct 17 08:30 log.46771637._017092.job.log.tgz.1
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas      7831 Oct 17 08:30 heartbeat.json
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 17 08:31 boinc_mmap_file
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas       823 Oct 17 08:31 pilotlog.txt
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas        95 Oct 17 08:31 pilot_heartbeat.json
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas        28 Oct 17 08:31 wrapper_checkpoint.txt
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas   1584905 Oct 17 08:31 log.46771637._017092.job.log.1
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas       357 Oct 17 08:31 output.list
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas       620 Oct 17 08:31 runtime_log
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas   2027520 Oct 17 08:31 result.tar.gz
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas      8689 Oct 17 08:31 runtime_log.err
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas       653 Oct 17 08:31 mTdLDmm2iT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvzYMDmGdbn4m.diag
[2025-10-17 08:31:30] -rw-r--r--. 1 boincer umatlas     21272 Oct 17 08:31 stderr.txt
[2025-10-17 08:31:30] HITS file was successfully produced:
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas 203061417 Oct 17 08:28 shared/HITS.pool.root.1
[2025-10-17 08:31:30]  *** Contents of shared directory: ***
[2025-10-17 08:31:30] total 425412
[2025-10-17 08:31:30] -rw-r--r--. 2 boincer umatlas 229936601 Oct 17 05:12 ATLAS.root_0
[2025-10-17 08:31:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 17 05:12 start_atlas.sh
[2025-10-17 08:31:30] -rw-r--r--. 2 boincer umatlas    569673 Oct 17 05:12 input.tar.gz
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas 203061417 Oct 17 08:28 HITS.pool.root.1
[2025-10-17 08:31:30] -rw-------. 1 boincer umatlas   2027520 Oct 17 08:31 result.tar.gz
08:31:32 (1871447): run_atlas exited; CPU time 52599.192338
08:31:32 (1871447): called boinc_finish(0)

</stderr_txt>
]]>

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