Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:24 (194749): wrapper (7.7.26015): starting
00:01:24 (194749): wrapper: running run_atlas (--nthreads 9)
[2025-10-17 00:01:24] Arguments: --nthreads 9
[2025-10-17 00:01:24] Threads: 9
[2025-10-17 00:01:24] Checking for CVMFS
[2025-10-17 00:01:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 00:01:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 00:01:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 00:01:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 00:01:27] 2.13.2.0 1756961 101120 305164 151802 2 235 27319764 32935936 19938 16776704 0 133641439 99.714 100673776 29478 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-17 00:01:27] CVMFS is ok
[2025-10-17 00:01:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 00:01:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 00:01:27] Further information can be found at the LHC@home message board.
[2025-10-17 00:01:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 00:01:27] Checking for apptainer binary...
[2025-10-17 00:01:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 00:01:27] Running /usr/bin/apptainer --version
[2025-10-17 00:01:27] apptainer version 1.4.3-1.el9
[2025-10-17 00:01:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 00:01:28] c-5-5.aglt2.org
[2025-10-17 00:01:28] apptainer works
[2025-10-17 00:01:28] Set ATHENA_PROC_NUMBER=9
[2025-10-17 00:01:28] Set ATHENA_CORE_NUMBER=9
[2025-10-17 00:01:28] Starting ATLAS job with PandaID=6847329043
[2025-10-17 00:01:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 07:42:35]  *** The last 200 lines of the pilot log: ***
[2025-10-17 07:42:35] 2025-10-17 11:41:58,667 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-17 07:42:35] 2025-10-17 11:41:58,692 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1554250000004
[2025-10-17 07:42:35] 2025-10-17 11:41:58,747 | INFO     | PID=201727 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-17 07:42:35] 2025-10-17 11:41:58,747 | INFO     | .. there are 26 such processes running
[2025-10-17 07:42:35] 2025-10-17 11:41:58,780 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6847329043/memory_monitor_summary.json (trf name=prmon)
[2025-10-17 07:42:35] 2025-10-17 11:41:58,781 | INFO     | extracted standard info from prmon json
[2025-10-17 07:42:35] 2025-10-17 11:41:58,781 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 07:42:35] 2025-10-17 11:41:58,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 07:42:35] 2025-10-17 11:41:58,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 07:42:35] 2025-10-17 11:41:58,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 07:42:35] 2025-10-17 11:41:58,832 | INFO     | fitting pss+swap vs Time
[2025-10-17 07:42:35] 2025-10-17 11:41:58,833 | INFO     | sum of square deviations: 28063616831.05579
[2025-10-17 07:42:35] 2025-10-17 11:41:58,847 | INFO     | sum of deviations: 411910245160.4947
[2025-10-17 07:42:35] 2025-10-17 11:41:58,847 | INFO     | mean x: 1760687557.7461023
[2025-10-17 07:42:35] 2025-10-17 11:41:58,847 | INFO     | mean y: 2068685.425389755
[2025-10-17 07:42:35] 2025-10-17 11:41:58,847 | INFO     | -- intersect: -25840831320.238102
[2025-10-17 07:42:35] 2025-10-17 11:41:58,847 | INFO     | intersect: -25840831320.238102
[2025-10-17 07:42:35] 2025-10-17 11:41:58,848 | INFO     | chi2: 7.7354344866903455
[2025-10-17 07:42:35] 2025-10-17 11:41:58,849 | INFO     | sum of square deviations: 27136427198.24094
[2025-10-17 07:42:35] 2025-10-17 11:41:58,862 | INFO     | sum of deviations: 447468535570.1981
[2025-10-17 07:42:35] 2025-10-17 11:41:58,862 | INFO     | mean x: 1760687405.2545044
[2025-10-17 07:42:35] 2025-10-17 11:41:58,862 | INFO     | mean y: 2074506.9009009008
[2025-10-17 07:42:35] 2025-10-17 11:41:58,862 | INFO     | -- intersect: -29030937432.01771
[2025-10-17 07:42:35] 2025-10-17 11:41:58,862 | INFO     | intersect: -29030937432.01771
[2025-10-17 07:42:35] 2025-10-17 11:41:58,863 | INFO     | chi2: 6.8900294461571
[2025-10-17 07:42:35] 2025-10-17 11:41:58,863 | INFO     | current chi2=6.8900294461571 (change=10.928992314366525 %)
[2025-10-17 07:42:35] 2025-10-17 11:41:58,863 | INFO     | right removable region: 443
[2025-10-17 07:42:35] 2025-10-17 11:41:58,864 | INFO     | sum of square deviations: 27136222848.240932
[2025-10-17 07:42:35] 2025-10-17 11:41:58,882 | INFO     | sum of deviations: 308803184608.5878
[2025-10-17 07:42:35] 2025-10-17 11:41:58,882 | INFO     | mean x: 1760687710.2545044
[2025-10-17 07:42:35] 2025-10-17 11:41:58,883 | INFO     | mean y: 2085619.3310810812
[2025-10-17 07:42:35] 2025-10-17 11:41:58,883 | INFO     | -- intersect: -20034084302.63868
[2025-10-17 07:42:35] 2025-10-17 11:41:58,883 | INFO     | intersect: -20034084302.63868
[2025-10-17 07:42:35] 2025-10-17 11:41:58,884 | INFO     | chi2: 4.992110514591978
[2025-10-17 07:42:35] 2025-10-17 11:41:58,884 | INFO     | current chi2=4.992110514591978 (change=35.46438117753507 %)
[2025-10-17 07:42:35] 2025-10-17 11:41:58,884 | INFO     | sum of square deviations: 26229480415.362167
[2025-10-17 07:42:35] 2025-10-17 11:41:58,894 | INFO     | sum of deviations: 253294090108.51498
[2025-10-17 07:42:35] 2025-10-17 11:41:58,895 | INFO     | mean x: 1760687862.763098
[2025-10-17 07:42:35] 2025-10-17 11:41:58,895 | INFO     | mean y: 2094956.562642369
[2025-10-17 07:42:35] 2025-10-17 11:41:58,895 | INFO     | -- intersect: -17000599077.074661
[2025-10-17 07:42:35] 2025-10-17 11:41:58,895 | INFO     | intersect: -17000599077.074661
[2025-10-17 07:42:35] 2025-10-17 11:41:58,915 | INFO     | chi2: 4.328806129572307
[2025-10-17 07:42:35] 2025-10-17 11:41:58,915 | INFO     | current chi2=4.328806129572307 (change=13.287053303023388 %)
[2025-10-17 07:42:35] 2025-10-17 11:41:58,915 | INFO     | left removable region: 20
[2025-10-17 07:42:35] 2025-10-17 11:41:58,916 | INFO     | sum of square deviations: 23464245731.423206
[2025-10-17 07:42:35] 2025-10-17 11:41:58,949 | INFO     | sum of deviations: 183402714741.61694
[2025-10-17 07:42:35] 2025-10-17 11:41:58,949 | INFO     | mean x: 1760687984.78487
[2025-10-17 07:42:35] 2025-10-17 11:41:58,975 | INFO     | mean y: 2122061.1276595746
[2025-10-17 07:42:35] 2025-10-17 11:41:58,976 | INFO     | -- intersect: -13759878214.468063
[2025-10-17 07:42:35] 2025-10-17 11:41:58,976 | INFO     | intersect: -13759878214.468063
[2025-10-17 07:42:35] 2025-10-17 11:41:58,977 | INFO     | chi2: 2.043184372766667
[2025-10-17 07:42:35] 2025-10-17 11:41:58,977 | INFO     | -- intersect: -13759878214.468063
[2025-10-17 07:42:35] 2025-10-17 11:41:58,977 | INFO     | current memory leak: 7.82 B/s (using 423 data points, chi2=2.04)
[2025-10-17 07:42:35] 2025-10-17 11:41:58,978 | INFO     | could have reported an average CPU frequency of 2602 MHz (18 samples)
[2025-10-17 07:42:35] 2025-10-17 11:41:58,978 | INFO     | ..............................
[2025-10-17 07:42:35] 2025-10-17 11:41:58,978 | INFO     | . Timing measurements:
[2025-10-17 07:42:35] 2025-10-17 11:41:58,978 | INFO     | . get job = 0 s
[2025-10-17 07:42:35] 2025-10-17 11:41:58,978 | INFO     | . initial setup = 6 s
[2025-10-17 07:42:35] 2025-10-17 11:41:58,978 | INFO     | . payload setup = 39 s
[2025-10-17 07:42:35] 2025-10-17 11:41:58,978 | INFO     | . stage-in = 0 s
[2025-10-17 07:42:35] 2025-10-17 11:41:58,978 | INFO     | . payload execution = 27414 s
[2025-10-17 07:42:35] 2025-10-17 11:41:58,978 | INFO     | . stage-out = 5 s
[2025-10-17 07:42:35] 2025-10-17 11:41:58,979 | INFO     | . log creation = 0 s
[2025-10-17 07:42:35] 2025-10-17 11:41:58,979 | INFO     | ..............................
[2025-10-17 07:42:35] 2025-10-17 11:41:59,750 | INFO     | time since job start (27565s) is within the limit (172800.0s)
[2025-10-17 07:42:35] 2025-10-17 11:42:00,030 | INFO     | 
[2025-10-17 07:42:35] 2025-10-17 11:42:00,031 | INFO     | job summary report
[2025-10-17 07:42:35] 2025-10-17 11:42:00,031 | INFO     | --------------------------------------------------
[2025-10-17 07:42:35] 2025-10-17 11:42:00,031 | INFO     | PanDA job id: 6847329043
[2025-10-17 07:42:35] 2025-10-17 11:42:00,031 | INFO     | task id: 46771637
[2025-10-17 07:42:35] 2025-10-17 11:42:00,031 | INFO     | errors: (none)
[2025-10-17 07:42:35] 2025-10-17 11:42:00,031 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 07:42:35] 2025-10-17 11:42:00,031 | INFO     | pilot state: finished 
[2025-10-17 07:42:35] 2025-10-17 11:42:00,031 | INFO     | transexitcode: 0
[2025-10-17 07:42:35] 2025-10-17 11:42:00,031 | INFO     | exeerrorcode: 0
[2025-10-17 07:42:35] 2025-10-17 11:42:00,032 | INFO     | exeerrordiag: 
[2025-10-17 07:42:35] 2025-10-17 11:42:00,032 | INFO     | exitcode: 0
[2025-10-17 07:42:35] 2025-10-17 11:42:00,032 | INFO     | exitmsg: OK
[2025-10-17 07:42:35] 2025-10-17 11:42:00,032 | INFO     | cpuconsumptiontime: 55469 s
[2025-10-17 07:42:35] 2025-10-17 11:42:00,032 | INFO     | nevents: 400
[2025-10-17 07:42:35] 2025-10-17 11:42:00,032 | INFO     | neventsw: 0
[2025-10-17 07:42:35] 2025-10-17 11:42:00,032 | INFO     | pid: 223075
[2025-10-17 07:42:35] 2025-10-17 11:42:00,032 | INFO     | pgrp: 223075
[2025-10-17 07:42:35] 2025-10-17 11:42:00,032 | INFO     | corecount: 9
[2025-10-17 07:42:35] 2025-10-17 11:42:00,032 | INFO     | event service: False
[2025-10-17 07:42:35] 2025-10-17 11:42:00,033 | INFO     | sizes: {0: 2348700, 1: 2348756, 2: 2348983, 3: 2348983, 13: 2349011, 24: 2349067, 32: 2349485, 36: 2349513, 27458: 2385920, 27464: 2394918, 27465: 2394974, 27499: 
[2025-10-17 07:42:35] 2025-10-17 11:42:00,033 | INFO     | --------------------------------------------------
[2025-10-17 07:42:35] 2025-10-17 11:42:00,033 | INFO     | 
[2025-10-17 07:42:35] 2025-10-17 11:42:00,033 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-17 07:42:35] 2025-10-17 11:42:00,170 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,170 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,170 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,170 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,172 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 07:42:35] 2025-10-17 11:42:00,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,172 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 07:42:35] 2025-10-17 11:42:00,222 | INFO     | job 6847329043 has completed (purged errors)
[2025-10-17 07:42:35] 2025-10-17 11:42:00,227 | INFO     | overall cleanup function is called
[2025-10-17 07:42:35] 2025-10-17 11:42:01,237 | INFO     | --- collectZombieJob: --- 10, [223075]
[2025-10-17 07:42:35] 2025-10-17 11:42:01,238 | INFO     | zombie collector waiting for pid 223075
[2025-10-17 07:42:35] 2025-10-17 11:42:01,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 07:42:35] 2025-10-17 11:42:01,238 | INFO     | collected zombie processes
[2025-10-17 07:42:35] 2025-10-17 11:42:01,238 | INFO     | will attempt to kill all subprocesses of pid=223075
[2025-10-17 07:42:35] 2025-10-17 11:42:02,208 | INFO     | process IDs to be killed: [223075] (in reverse order)
[2025-10-17 07:42:35] 2025-10-17 11:42:02,524 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 07:42:35] 2025-10-17 11:42:02,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 07:42:35] 2025-10-17 11:42:02,604 | INFO     | did not find any defunct processes belonging to 223075
[2025-10-17 07:42:35] 2025-10-17 11:42:02,633 | INFO     | did not find any defunct processes belonging to 223075
[2025-10-17 07:42:35] 2025-10-17 11:42:02,633 | INFO     | ready for new job
[2025-10-17 07:42:35] 2025-10-17 11:42:02,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 07:42:35] 2025-10-17 11:42:02,644 | INFO     | ***************************************
[2025-10-17 07:42:35] 2025-10-17 11:42:02,644 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 07:42:35] 2025-10-17 11:42:02,644 | INFO     | ***************************************
[2025-10-17 07:42:35] 2025-10-17 11:42:02,645 | INFO     | 
[2025-10-17 07:42:35] 2025-10-17 11:42:02,647 | INFO     | architecture information:
[2025-10-17 07:42:35] 2025-10-17 11:42:02,650 | INFO     | executing command: cat /etc/os-release
[2025-10-17 07:42:35] 2025-10-17 11:42:02,833 | INFO     | cat /etc/os-release:
[2025-10-17 07:42:35] NAME="CentOS Linux"
[2025-10-17 07:42:35] VERSION="7 (Core)"
[2025-10-17 07:42:35] ID="centos"
[2025-10-17 07:42:35] ID_LIKE="rhel fedora"
[2025-10-17 07:42:35] VERSION_ID="7"
[2025-10-17 07:42:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 07:42:35] ANSI_COLOR="0;31"
[2025-10-17 07:42:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 07:42:35] HOME_URL="https://www.centos.org/"
[2025-10-17 07:42:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 07:42:35] 
[2025-10-17 07:42:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 07:42:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 07:42:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 07:42:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 07:42:35] 
[2025-10-17 07:42:35] 2025-10-17 11:42:02,838 | INFO     | ***************************************
[2025-10-17 07:42:35] 2025-10-17 11:42:03,347 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-17 07:42:35] 2025-10-17 11:42:03,389 | INFO     | sufficient remaining disk space (75643224064 B)
[2025-10-17 07:42:35] 2025-10-17 11:42:03,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 07:42:35] 2025-10-17 11:42:03,390 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 07:42:35] 2025-10-17 11:42:03,390 | INFO     | update_server=False
[2025-10-17 07:42:35] 2025-10-17 11:42:03,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 07:42:35] 2025-10-17 11:42:03,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 07:42:35] 2025-10-17 11:42:03,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 07:42:35] 2025-10-17 11:42:04,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 07:42:35] 2025-10-17 11:42:04,048 | INFO     | aborting loop
[2025-10-17 07:42:35] 2025-10-17 11:42:04,328 | INFO     | all data control threads have been joined
[2025-10-17 07:42:35] 2025-10-17 11:42:04,401 | INFO     | [job] retrieve thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:04,470 | INFO     | [payload] failed_post thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:04,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 07:42:35] 2025-10-17 11:42:04,655 | INFO     | all payload control threads have been joined
[2025-10-17 07:42:35] 2025-10-17 11:42:04,784 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:04,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:04,863 | INFO     | all job control threads have been joined
[2025-10-17 07:42:35] 2025-10-17 11:42:05,070 | INFO     | [job] job monitor thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:05,152 | INFO     | [data] copytool_in thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:05,237 | INFO     | [payload] validate_post thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:05,334 | INFO     | [data] control thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:05,447 | INFO     | [data] copytool_out thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:05,514 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:05,637 | INFO     | [job] queue monitor thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:05,661 | INFO     | [payload] control thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:05,740 | INFO     | [job] validate thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:05,771 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:05,871 | INFO     | [job] control thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:07,427 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 07:42:35] 2025-10-17 11:42:25,571 | INFO     | [monitor] cgroup control has ended
[2025-10-17 07:42:35] 2025-10-17 11:42:25,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984400414528)>', '<ExcThread(monitor, started 139983897741056)>']
[2025-10-17 07:42:35] 2025-10-17 11:42:30,998 | INFO     | all workflow threads have been joined
[2025-10-17 07:42:35] 2025-10-17 11:42:30,998 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 07:42:35] 2025-10-17 11:42:30,999 | INFO     | traces error code: 0
[2025-10-17 07:42:35] 2025-10-17 11:42:30,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 07:42:35] 2025-10-17 11:42:33,993 | INFO     | PID=201727 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-17 07:42:35] 2025-10-17 11:42:33,996 | INFO     | .. there are 26 such processes running
[2025-10-17 07:42:35] 2025-10-17 11:42:34,017 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 07:42:35] 2025-10-17 11:42:34,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 07:42:35] 2025-10-17 11:42:34,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 07:42:35] 2025-10-17 11:42:34,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 07:42:35] 2025-10-17 11:42:34,017 | INFO     | [monitor] control thread has ended
[2025-10-17 07:42:35] 2025-10-17 11:42:34,356 [wrapper] ==== pilot stdout END ====
[2025-10-17 07:42:35] 2025-10-17 11:42:34,359 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 07:42:35] 2025-10-17 11:42:34,390 [wrapper] pilotpid: 201727
[2025-10-17 07:42:35] 2025-10-17 11:42:34,392 [wrapper] Pilot exit status: 0
[2025-10-17 07:42:35] 2025-10-17 11:42:34,442 [wrapper] pandaids: 6847329043
[2025-10-17 07:42:35] 2025-10-17 11:42:34,570 [wrapper] cleanup supervisor_pilot 2703466 201728
[2025-10-17 07:42:35] 2025-10-17 11:42:34,574 [wrapper] Test setup, not cleaning
[2025-10-17 07:42:35] 2025-10-17 11:42:34,577 [wrapper] apfmon messages muted
[2025-10-17 07:42:35] 2025-10-17 11:42:34,580 [wrapper] ==== wrapper stdout END ====
[2025-10-17 07:42:35] 2025-10-17 11:42:34,583 [wrapper] ==== wrapper stderr END ====
[2025-10-17 07:42:35]  *** Error codes and diagnostics ***
[2025-10-17 07:42:35]     "exeErrorCode": 0,
[2025-10-17 07:42:35]     "exeErrorDiag": "",
[2025-10-17 07:42:35]     "pilotErrorCode": 0,
[2025-10-17 07:42:35]     "pilotErrorDiag": "",
[2025-10-17 07:42:35]  *** Listing of results directory ***
[2025-10-17 07:42:35] total 439048
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 16 14:31 pilot3.tar.gz
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 16 15:23 queuedata.json
[2025-10-17 07:42:35] -rwx------. 1 boincer umatlas     36292 Oct 16 15:23 runpilot2-wrapper.sh
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas       100 Oct 17 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 07:42:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 17 00:01 run_atlas
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas       105 Oct 17 00:01 job.xml
[2025-10-17 07:42:35] -rw-r--r--. 2 boincer umatlas 228454080 Oct 17 00:01 EVNT.46771634._000696.pool.root.1
[2025-10-17 07:42:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 17 00:01 start_atlas.sh
[2025-10-17 07:42:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 17 00:01 shared
[2025-10-17 07:42:35] -rw-r--r--. 2 boincer umatlas    569677 Oct 17 00:01 input.tar.gz
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas         0 Oct 17 00:01 boinc_lockfile
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas      2557 Oct 17 00:01 pandaJob.out
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas    976718 Oct 17 00:02 agis_schedconf.cvmfs.json
[2025-10-17 07:42:35] drwx------. 5 boincer umatlas      4096 Oct 17 00:02 pilot3
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas      6658 Oct 17 07:37 init_data.xml
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas 209239992 Oct 17 07:39 HITS.46771637._016803.pool.root.1
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas       531 Oct 17 07:40 boinc_task_state.xml
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas      1048 Oct 17 07:41 memory_monitor_summary.json
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas   1560740 Oct 17 07:41 agis_ddmendpoints.agis.ALL.json
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas    669426 Oct 17 07:41 log.46771637._016803.job.log.tgz.1
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas      7827 Oct 17 07:41 heartbeat.json
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 17 07:42 boinc_mmap_file
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas        28 Oct 17 07:42 wrapper_checkpoint.txt
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas        95 Oct 17 07:42 pilot_heartbeat.json
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas       822 Oct 17 07:42 pilotlog.txt
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas   3328518 Oct 17 07:42 log.46771637._016803.job.log.1
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas       357 Oct 17 07:42 output.list
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas       620 Oct 17 07:42 runtime_log
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas   4014080 Oct 17 07:42 result.tar.gz
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas      8689 Oct 17 07:42 runtime_log.err
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas       653 Oct 17 07:42 RALMDmrkiT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSXrNDmySPPPo.diag
[2025-10-17 07:42:35] -rw-r--r--. 1 boincer umatlas     21301 Oct 17 07:42 stderr.txt
[2025-10-17 07:42:35] HITS file was successfully produced:
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas 209239992 Oct 17 07:39 shared/HITS.pool.root.1
[2025-10-17 07:42:35]  *** Contents of shared directory: ***
[2025-10-17 07:42:35] total 431940
[2025-10-17 07:42:35] -rw-r--r--. 2 boincer umatlas 228454080 Oct 17 00:01 ATLAS.root_0
[2025-10-17 07:42:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 17 00:01 start_atlas.sh
[2025-10-17 07:42:35] -rw-r--r--. 2 boincer umatlas    569677 Oct 17 00:01 input.tar.gz
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas 209239992 Oct 17 07:39 HITS.pool.root.1
[2025-10-17 07:42:35] -rw-------. 1 boincer umatlas   4014080 Oct 17 07:42 result.tar.gz
07:42:36 (194749): run_atlas exited; CPU time 56497.773231
07:42:36 (194749): called boinc_finish(0)

</stderr_txt>
]]>

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