Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
08:08:41 (20221): wrapper (7.7.26015): starting
08:08:41 (20221): wrapper: running run_atlas (--nthreads 4)
[2025-10-17 08:08:41] Arguments: --nthreads 4
[2025-10-17 08:08:41] Threads: 4
[2025-10-17 08:08:41] Checking for CVMFS
[2025-10-17 08:08:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 08:09:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 08:09:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 08:09:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 08:09:02] 2.11.5.0 20443 0 25064 151807 3 1 2157038 4194304 0 130560 0 0 0.000 1291 529 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-17 08:09:02] CVMFS is ok
[2025-10-17 08:09:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 08:09:02] Checking for apptainer binary...
[2025-10-17 08:09:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 08:09:02] Running /usr/bin/apptainer --version
[2025-10-17 08:09:03] apptainer version 1.0.3
[2025-10-17 08:09:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 08:09:03] TeeC25
[2025-10-17 08:09:03] apptainer works
[2025-10-17 08:09:03] Set ATHENA_PROC_NUMBER=4
[2025-10-17 08:09:03] Set ATHENA_CORE_NUMBER=4
[2025-10-17 08:09:03] Starting ATLAS job with PandaID=6847328962
[2025-10-17 08:09:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 11:41:53]  *** The last 200 lines of the pilot log: ***
[2025-10-17 11:41:53] 2025-10-17 10:40:54,602 | INFO     | -- intersect: -12098122543.071793
[2025-10-17 11:41:53] 2025-10-17 10:40:54,602 | INFO     | intersect: -12098122543.071793
[2025-10-17 11:41:53] 2025-10-17 10:40:54,602 | INFO     | chi2: 1.3543246176383432
[2025-10-17 11:41:53] 2025-10-17 10:40:54,602 | INFO     | sum of square deviations: 2555770710.5
[2025-10-17 11:41:53] 2025-10-17 10:40:54,603 | INFO     | sum of deviations: 18375332224.5
[2025-10-17 11:41:53] 2025-10-17 10:40:54,603 | INFO     | mean x: 1760691115.5
[2025-10-17 11:41:53] 2025-10-17 10:40:54,603 | INFO     | mean y: 2357512.2722772276
[2025-10-17 11:41:53] 2025-10-17 10:40:54,603 | INFO     | -- intersect: -12656557490.986582
[2025-10-17 11:41:53] 2025-10-17 10:40:54,603 | INFO     | intersect: -12656557490.986582
[2025-10-17 11:41:53] 2025-10-17 10:40:54,603 | INFO     | chi2: 1.3551484459075966
[2025-10-17 11:41:53] 2025-10-17 10:40:54,603 | INFO     | current chi2=1.3551484459075966 (change=-0.06082945392294549 %)
[2025-10-17 11:41:53] 2025-10-17 10:40:54,603 | INFO     | right removable region: 201
[2025-10-17 11:41:53] 2025-10-17 10:40:54,603 | INFO     | sum of square deviations: 2555770710.5
[2025-10-17 11:41:53] 2025-10-17 10:40:54,604 | INFO     | sum of deviations: 102592605.99999869
[2025-10-17 11:41:53] 2025-10-17 10:40:54,604 | INFO     | mean x: 1760691420.5
[2025-10-17 11:41:53] 2025-10-17 10:40:54,604 | INFO     | mean y: 2372343.3663366335
[2025-10-17 11:41:53] 2025-10-17 10:40:54,604 | INFO     | -- intersect: -68304544.99803315
[2025-10-17 11:41:53] 2025-10-17 10:40:54,604 | INFO     | intersect: -68304544.99803315
[2025-10-17 11:41:53] 2025-10-17 10:40:54,604 | INFO     | chi2: 0.0767068516431093
[2025-10-17 11:41:53] 2025-10-17 10:40:54,604 | INFO     | current chi2=0.0767068516431093 (change=94.3361546674925 %)
[2025-10-17 11:41:53] 2025-10-17 10:40:54,604 | INFO     | sum of square deviations: 2370641658.0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,605 | INFO     | sum of deviations: 5995866839.000001
[2025-10-17 11:41:53] 2025-10-17 10:40:54,605 | INFO     | mean x: 1760691573.0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,605 | INFO     | mean y: 2367552.2842639596
[2025-10-17 11:41:53] 2025-10-17 10:40:54,605 | INFO     | -- intersect: -4450803250.916668
[2025-10-17 11:41:53] 2025-10-17 10:40:54,605 | INFO     | intersect: -4450803250.916668
[2025-10-17 11:41:53] 2025-10-17 10:40:54,605 | INFO     | chi2: 0.0020244863686117278
[2025-10-17 11:41:53] 2025-10-17 10:40:54,605 | INFO     | current chi2=0.0020244863686117278 (change=97.36074897451016 %)
[2025-10-17 11:41:53] 2025-10-17 10:40:54,605 | INFO     | sum of square deviations: 2194675568.0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,606 | INFO     | sum of deviations: 4764773165.500001
[2025-10-17 11:41:53] 2025-10-17 10:40:54,606 | INFO     | mean x: 1760691725.5
[2025-10-17 11:41:53] 2025-10-17 10:40:54,606 | INFO     | mean y: 2368616.0572916665
[2025-10-17 11:41:53] 2025-10-17 10:40:54,606 | INFO     | -- intersect: -3820199424.8424525
[2025-10-17 11:41:53] 2025-10-17 10:40:54,606 | INFO     | intersect: -3820199424.8424525
[2025-10-17 11:41:53] 2025-10-17 10:40:54,606 | INFO     | chi2: 0.0012614737600628188
[2025-10-17 11:41:53] 2025-10-17 10:40:54,606 | INFO     | current chi2=0.0012614737600628188 (change=37.68919467075185 %)
[2025-10-17 11:41:53] 2025-10-17 10:40:54,606 | INFO     | sum of square deviations: 2027639878.0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,607 | INFO     | sum of deviations: 4085149503.9999995
[2025-10-17 11:41:53] 2025-10-17 10:40:54,607 | INFO     | mean x: 1760691878.0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,607 | INFO     | mean y: 2369236.5935828877
[2025-10-17 11:41:53] 2025-10-17 10:40:54,607 | INFO     | -- intersect: -3544951779.406146
[2025-10-17 11:41:53] 2025-10-17 10:40:54,607 | INFO     | intersect: -3544951779.406146
[2025-10-17 11:41:53] 2025-10-17 10:40:54,607 | INFO     | chi2: 0.0011445153870970324
[2025-10-17 11:41:53] 2025-10-17 10:40:54,607 | INFO     | current chi2=0.0011445153870970324 (change=9.271566057780078 %)
[2025-10-17 11:41:53] 2025-10-17 10:40:54,607 | INFO     | left removable region: 40
[2025-10-17 11:41:53] 2025-10-17 10:40:54,608 | INFO     | sum of square deviations: 1294014960.0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,608 | INFO     | sum of deviations: 1512020603.0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,608 | INFO     | mean x: 1760692305.0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,608 | INFO     | mean y: 2371731.8198757763
[2025-10-17 11:41:53] 2025-10-17 10:40:54,608 | INFO     | -- intersect: -2054948409.7521813
[2025-10-17 11:41:53] 2025-10-17 10:40:54,608 | INFO     | intersect: -2054948409.7521813
[2025-10-17 11:41:53] 2025-10-17 10:40:54,608 | INFO     | chi2: 0.00038702868004718245
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | -- intersect: -2054948409.7521813
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | current memory leak: 1.17 B/s (using 161 data points, chi2=0.00)
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | could have reported an average CPU frequency of 3196 MHz (10 samples)
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | ..............................
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | . Timing measurements:
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | . get job = 0 s
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | . initial setup = 6 s
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | . payload setup = 4 s
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | . stage-in = 0 s
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | . payload execution = 12624 s
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | . stage-out = 2 s
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | . log creation = 0 s
[2025-10-17 11:41:53] 2025-10-17 10:40:54,609 | INFO     | ..............................
[2025-10-17 11:41:53] 2025-10-17 10:40:54,650 | INFO     | 
[2025-10-17 11:41:53] 2025-10-17 10:40:54,650 | INFO     | job summary report
[2025-10-17 11:41:53] 2025-10-17 10:40:54,650 | INFO     | --------------------------------------------------
[2025-10-17 11:41:53] 2025-10-17 10:40:54,650 | INFO     | PanDA job id: 6847328962
[2025-10-17 11:41:53] 2025-10-17 10:40:54,650 | INFO     | task id: 46771637
[2025-10-17 11:41:53] 2025-10-17 10:40:54,650 | INFO     | errors: (none)
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | pilot state: finished 
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | transexitcode: 0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | exeerrorcode: 0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | exeerrordiag: 
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | exitcode: 0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | exitmsg: OK
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | cpuconsumptiontime: 49147 s
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | nevents: 400
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | neventsw: 0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | pid: 30897
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | pgrp: 30897
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | corecount: 4
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | event service: False
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | sizes: {0: 2348926, 2: 2349188, 10: 2349216, 12630: 2379164, 12633: 2388160, 12636: 2388216, 12674: 2388538}
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | --------------------------------------------------
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | 
[2025-10-17 11:41:53] 2025-10-17 10:40:54,651 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-17 11:41:53] 2025-10-17 10:40:54,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,658 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,658 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | job 6847328962 has completed (purged errors)
[2025-10-17 11:41:53] 2025-10-17 10:40:54,659 | INFO     | overall cleanup function is called
[2025-10-17 11:41:53] 2025-10-17 10:40:55,665 | INFO     | --- collectZombieJob: --- 10, [30897]
[2025-10-17 11:41:53] 2025-10-17 10:40:55,666 | INFO     | zombie collector waiting for pid 30897
[2025-10-17 11:41:53] 2025-10-17 10:40:55,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 11:41:53] 2025-10-17 10:40:55,666 | INFO     | collected zombie processes
[2025-10-17 11:41:53] 2025-10-17 10:40:55,666 | INFO     | will attempt to kill all subprocesses of pid=30897
[2025-10-17 11:41:53] 2025-10-17 10:40:55,712 | INFO     | process IDs to be killed: [30897] (in reverse order)
[2025-10-17 11:41:53] 2025-10-17 10:40:55,730 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 11:41:53] 2025-10-17 10:40:55,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 11:41:53] 2025-10-17 10:40:55,731 | INFO     | did not find any defunct processes belonging to 30897
[2025-10-17 11:41:53] 2025-10-17 10:40:55,732 | INFO     | did not find any defunct processes belonging to 30897
[2025-10-17 11:41:53] 2025-10-17 10:40:55,733 | INFO     | ready for new job
[2025-10-17 11:41:53] 2025-10-17 10:40:55,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 11:41:53] 2025-10-17 10:40:55,734 | INFO     | ***************************************
[2025-10-17 11:41:53] 2025-10-17 10:40:55,734 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 11:41:53] 2025-10-17 10:40:55,734 | INFO     | ***************************************
[2025-10-17 11:41:53] 2025-10-17 10:40:55,734 | INFO     | 
[2025-10-17 11:41:53] 2025-10-17 10:40:55,751 | INFO     | architecture information:
[2025-10-17 11:41:53] 2025-10-17 10:40:55,751 | INFO     | executing command: cat /etc/os-release
[2025-10-17 11:41:53] 2025-10-17 10:40:55,759 | INFO     | cat /etc/os-release:
[2025-10-17 11:41:53] NAME="CentOS Linux"
[2025-10-17 11:41:53] VERSION="7 (Core)"
[2025-10-17 11:41:53] ID="centos"
[2025-10-17 11:41:53] ID_LIKE="rhel fedora"
[2025-10-17 11:41:53] VERSION_ID="7"
[2025-10-17 11:41:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 11:41:53] ANSI_COLOR="0;31"
[2025-10-17 11:41:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 11:41:53] HOME_URL="https://www.centos.org/"
[2025-10-17 11:41:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 11:41:53] 
[2025-10-17 11:41:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 11:41:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 11:41:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 11:41:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 11:41:53] 
[2025-10-17 11:41:53] 2025-10-17 10:40:55,759 | INFO     | ***************************************
[2025-10-17 11:41:53] 2025-10-17 10:40:56,263 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-17 11:41:53] 2025-10-17 10:40:56,275 | INFO     | sufficient remaining disk space (419738681344 B)
[2025-10-17 11:41:53] 2025-10-17 10:40:56,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 11:41:53] 2025-10-17 10:40:56,276 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 11:41:53] 2025-10-17 10:40:56,276 | INFO     | update_server=False
[2025-10-17 11:41:53] 2025-10-17 10:40:56,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 11:41:53] 2025-10-17 10:40:56,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 11:41:53] 2025-10-17 10:40:56,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 11:41:53] 2025-10-17 10:40:56,276 | INFO     | aborting loop
[2025-10-17 11:41:53] 2025-10-17 10:40:56,310 | INFO     | all job control threads have been joined
[2025-10-17 11:41:53] 2025-10-17 10:40:56,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 11:41:53] 2025-10-17 10:40:57,091 | INFO     | all payload control threads have been joined
[2025-10-17 11:41:53] 2025-10-17 10:40:57,147 | INFO     | all data control threads have been joined
[2025-10-17 11:41:53] 2025-10-17 10:40:57,281 | INFO     | [job] retrieve thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:57,282 | INFO     | [job] queue monitor thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:57,282 | INFO     | [job] job monitor thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:57,315 | INFO     | [job] control thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:57,350 | INFO     | [payload] failed_post thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:57,374 | INFO     | [data] copytool_in thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:58,026 | INFO     | [job] validate thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:58,035 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:58,052 | INFO     | [payload] validate_post thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:58,097 | INFO     | [payload] control thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:58,103 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:58,150 | INFO     | [data] control thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:58,432 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:58,531 | INFO     | [data] copytool_out thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:40:58,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 11:41:53] 2025-10-17 10:41:02,707 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:41:06,435 | INFO     | job.realtimelogging is not enabled
[2025-10-17 11:41:53] 2025-10-17 10:41:07,441 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 11:41:53] 2025-10-17 10:41:26,829 | INFO     | PID=24532 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 11:41:53] 2025-10-17 10:41:26,829 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 11:41:53] 2025-10-17 10:41:26,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 11:41:53] 2025-10-17 10:41:26,829 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 11:41:53] 2025-10-17 10:41:48,263 | INFO     | [monitor] cgroup control has ended
[2025-10-17 11:41:53] 2025-10-17 10:41:48,315 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226153285440)>', '<ExcThread(monitor, started 140225430935296)>']
[2025-10-17 11:41:53] 2025-10-17 10:41:48,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 11:41:53] 2025-10-17 10:41:48,942 | INFO     | [monitor] control thread has ended
[2025-10-17 11:41:53] 2025-10-17 10:41:53,340 | INFO     | all workflow threads have been joined
[2025-10-17 11:41:53] 2025-10-17 10:41:53,341 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 11:41:53] 2025-10-17 10:41:53,341 | INFO     | traces error code: 0
[2025-10-17 11:41:53] 2025-10-17 10:41:53,342 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 11:41:53] 2025-10-17 10:41:53,422 [wrapper] ==== pilot stdout END ====
[2025-10-17 11:41:53] 2025-10-17 10:41:53,424 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 11:41:53] 2025-10-17 10:41:53,425 [wrapper] pilotpid: 24532
[2025-10-17 11:41:53] 2025-10-17 10:41:53,426 [wrapper] Pilot exit status: 0
[2025-10-17 11:41:53] 2025-10-17 10:41:53,437 [wrapper] pandaids: 6847328962
[2025-10-17 11:41:53] 2025-10-17 10:41:53,447 [wrapper] cleanup supervisor_pilot 21592 24533
[2025-10-17 11:41:53] 2025-10-17 10:41:53,449 [wrapper] Test setup, not cleaning
[2025-10-17 11:41:53] 2025-10-17 10:41:53,450 [wrapper] apfmon messages muted
[2025-10-17 11:41:53] 2025-10-17 10:41:53,452 [wrapper] ==== wrapper stdout END ====
[2025-10-17 11:41:53] 2025-10-17 10:41:53,453 [wrapper] ==== wrapper stderr END ====
[2025-10-17 11:41:53]  *** Error codes and diagnostics ***
[2025-10-17 11:41:53]     "exeErrorCode": 0,
[2025-10-17 11:41:53]     "exeErrorDiag": "",
[2025-10-17 11:41:53]     "pilotErrorCode": 0,
[2025-10-17 11:41:53]     "pilotErrorDiag": "",
[2025-10-17 11:41:53]  *** Listing of results directory ***
[2025-10-17 11:41:53] total 436004
[2025-10-17 11:41:53] -rw-r--r-- 1 m m    557409 Oct 16 19:31 pilot3.tar.gz
[2025-10-17 11:41:53] -rw-r--r-- 1 m m      5112 Oct 16 20:18 queuedata.json
[2025-10-17 11:41:53] -rwx------ 1 m m     36292 Oct 16 20:19 runpilot2-wrapper.sh
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m       100 Oct 17 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 11:41:53] -rwxr-xr-x 1 m m      7986 Oct 17 08:08 run_atlas
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m       105 Oct 17 08:08 job.xml
[2025-10-17 11:41:53] -rw-r--r-- 2 m m     15120 Oct 17 08:08 start_atlas.sh
[2025-10-17 11:41:53] drwxrwx--x 2 m m      4096 Oct 17 08:08 shared
[2025-10-17 11:41:53] -rw-r--r-- 2 m m    569676 Oct 17 08:08 input.tar.gz
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m      5880 Oct 17 08:08 init_data.xml
[2025-10-17 11:41:53] -rw-r--r-- 2 m m 229262838 Oct 17 08:08 EVNT.46771634._000693.pool.root.1
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m         0 Oct 17 08:08 boinc_lockfile
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m      2557 Oct 17 08:09 pandaJob.out
[2025-10-17 11:41:53] -rw------- 1 m m    976726 Oct 17 08:09 agis_schedconf.cvmfs.json
[2025-10-17 11:41:53] drwx------ 5 m m      4096 Oct 17 08:09 pilot3
[2025-10-17 11:41:53] -rw------- 1 m m 209002279 Oct 17 11:39 HITS.46771637._016722.pool.root.1
[2025-10-17 11:41:53] -rw------- 1 m m      1028 Oct 17 11:40 memory_monitor_summary.json
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m       530 Oct 17 11:40 boinc_task_state.xml
[2025-10-17 11:41:53] -rw------- 1 m m   1560740 Oct 17 11:40 agis_ddmendpoints.agis.ALL.json
[2025-10-17 11:41:53] -rw------- 1 m m    371211 Oct 17 11:40 log.46771637._016722.job.log.tgz.1
[2025-10-17 11:41:53] -rw------- 1 m m        95 Oct 17 11:40 pilot_heartbeat.json
[2025-10-17 11:41:53] -rw------- 1 m m      7783 Oct 17 11:40 heartbeat.json
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m      8192 Oct 17 11:41 boinc_mmap_file
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m        28 Oct 17 11:41 wrapper_checkpoint.txt
[2025-10-17 11:41:53] -rw------- 1 m m      4818 Oct 17 11:41 pilotlog.txt
[2025-10-17 11:41:53] -rw------- 1 m m   1775785 Oct 17 11:41 log.46771637._016722.job.log.1
[2025-10-17 11:41:53] -rw------- 1 m m       357 Oct 17 11:41 output.list
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m       620 Oct 17 11:41 runtime_log
[2025-10-17 11:41:53] -rw------- 1 m m   2170880 Oct 17 11:41 result.tar.gz
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m      8618 Oct 17 11:41 runtime_log.err
[2025-10-17 11:41:53] -rw------- 1 m m       644 Oct 17 11:41 rMUNDmjgiT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzwYMDmNC6cMn.diag
[2025-10-17 11:41:53] -rw-rw-r-- 1 m m     20547 Oct 17 11:41 stderr.txt
[2025-10-17 11:41:53] HITS file was successfully produced:
[2025-10-17 11:41:53] -rw------- 1 m m 209002279 Oct 17 11:39 shared/HITS.pool.root.1
[2025-10-17 11:41:53]  *** Contents of shared directory: ***
[2025-10-17 11:41:53] total 430700
[2025-10-17 11:41:53] -rw-r--r-- 2 m m     15120 Oct 17 08:08 start_atlas.sh
[2025-10-17 11:41:53] -rw-r--r-- 2 m m    569676 Oct 17 08:08 input.tar.gz
[2025-10-17 11:41:53] -rw-r--r-- 2 m m 229262838 Oct 17 08:08 ATLAS.root_0
[2025-10-17 11:41:53] -rw------- 1 m m 209002279 Oct 17 11:39 HITS.pool.root.1
[2025-10-17 11:41:53] -rw------- 1 m m   2170880 Oct 17 11:41 result.tar.gz
11:41:55 (20221): run_atlas exited; CPU time 49273.822940
11:41:55 (20221): called boinc_finish(0)

</stderr_txt>
]]>

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