Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
08:04:16 (19478): wrapper (7.7.26015): starting
08:04:16 (19478): wrapper: running run_atlas (--nthreads 4)
[2025-10-17 08:04:16] Arguments: --nthreads 4
[2025-10-17 08:04:16] Threads: 4
[2025-10-17 08:04:16] Checking for CVMFS
[2025-10-17 08:04:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 08:04:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 08:04:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 08:05:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 08:05:00] 2.11.5.0 19700 0 25072 151807 3 1 2309555 4194304 0 130560 0 0 0.000 1291 54 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-17 08:05:00] CVMFS is ok
[2025-10-17 08:05:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 08:05:00] Checking for apptainer binary...
[2025-10-17 08:05:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 08:05:00] Running /usr/bin/apptainer --version
[2025-10-17 08:05:00] apptainer version 1.0.3
[2025-10-17 08:05:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 08:05:01] TeeC26
[2025-10-17 08:05:01] apptainer works
[2025-10-17 08:05:01] Set ATHENA_PROC_NUMBER=4
[2025-10-17 08:05:01] Set ATHENA_CORE_NUMBER=4
[2025-10-17 08:05:01] Starting ATLAS job with PandaID=6847329191
[2025-10-17 08:05:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 11:03:09]  *** The last 200 lines of the pilot log: ***
[2025-10-17 11:03:09] 2025-10-17 10:02:37,185 | INFO     | current chi2=1.4698950979181136 (change=-0.08290331285143604 %)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,185 | INFO     | right removable region: 168
[2025-10-17 11:03:09] 2025-10-17 10:02:37,186 | INFO     | sum of square deviations: 1496660620.0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,186 | INFO     | sum of deviations: -6622745599.999998
[2025-10-17 11:03:09] 2025-10-17 10:02:37,186 | INFO     | mean x: 1760690181.0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,186 | INFO     | mean y: 2387212.8579881657
[2025-10-17 11:03:09] 2025-10-17 10:02:37,186 | INFO     | -- intersect: 7793467564.247838
[2025-10-17 11:03:09] 2025-10-17 10:02:37,186 | INFO     | intersect: 7793467564.247838
[2025-10-17 11:03:09] 2025-10-17 10:02:37,186 | INFO     | chi2: 0.1307764324108145
[2025-10-17 11:03:09] 2025-10-17 10:02:37,186 | INFO     | current chi2=0.1307764324108145 (change=91.09563324681531 %)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,186 | INFO     | sum of square deviations: 1367709365.0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,187 | INFO     | sum of deviations: 2306440469.4999995
[2025-10-17 11:03:09] 2025-10-17 10:02:37,187 | INFO     | mean x: 1760690333.5
[2025-10-17 11:03:09] 2025-10-17 10:02:37,187 | INFO     | mean y: 2376646.274390244
[2025-10-17 11:03:09] 2025-10-17 10:02:37,187 | INFO     | -- intersect: -2966768366.0812507
[2025-10-17 11:03:09] 2025-10-17 10:02:37,187 | INFO     | intersect: -2966768366.0812507
[2025-10-17 11:03:09] 2025-10-17 10:02:37,187 | INFO     | chi2: 0.029329963787298373
[2025-10-17 11:03:09] 2025-10-17 10:02:37,187 | INFO     | current chi2=0.029329963787298373 (change=77.5724392793017 %)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,187 | INFO     | sum of square deviations: 1246386160.0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,188 | INFO     | sum of deviations: 3147701565.0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,188 | INFO     | mean x: 1760690486.0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,188 | INFO     | mean y: 2375653.6163522014
[2025-10-17 11:03:09] 2025-10-17 10:02:37,188 | INFO     | -- intersect: -4444182223.970166
[2025-10-17 11:03:09] 2025-10-17 10:02:37,188 | INFO     | intersect: -4444182223.970166
[2025-10-17 11:03:09] 2025-10-17 10:02:37,188 | INFO     | chi2: 0.001070906296918618
[2025-10-17 11:03:09] 2025-10-17 10:02:37,188 | INFO     | current chi2=0.001070906296918618 (change=96.34876365792724 %)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,188 | INFO     | sum of square deviations: 1132458442.5
[2025-10-17 11:03:09] 2025-10-17 10:02:37,189 | INFO     | sum of deviations: 2312473461.0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,189 | INFO     | mean x: 1760690638.5
[2025-10-17 11:03:09] 2025-10-17 10:02:37,189 | INFO     | mean y: 2376767.051948052
[2025-10-17 11:03:09] 2025-10-17 10:02:37,189 | INFO     | -- intersect: -3592943133.229863
[2025-10-17 11:03:09] 2025-10-17 10:02:37,189 | INFO     | intersect: -3592943133.229863
[2025-10-17 11:03:09] 2025-10-17 10:02:37,189 | INFO     | chi2: 0.0004938518916441266
[2025-10-17 11:03:09] 2025-10-17 10:02:37,189 | INFO     | current chi2=0.0004938518916441266 (change=53.88467757962431 %)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,189 | INFO     | sum of square deviations: 1025693650.0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | sum of deviations: 1841938736.9999998
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | mean x: 1760690791.0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | mean y: 2377439.053691275
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | -- intersect: -3159467788.1465263
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | intersect: -3159467788.1465263
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | chi2: 0.0003762354519283968
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | current chi2=0.0003762354519283968 (change=23.816136316530518 %)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | left removable region: 50
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | sum of square deviations: 509440249.5
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | sum of deviations: 313347666.99999994
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | mean x: 1760691370.5
[2025-10-17 11:03:09] 2025-10-17 10:02:37,190 | INFO     | mean y: 2379796.118644068
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | -- intersect: -1080590255.4128017
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | intersect: -1080590255.4128017
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | chi2: 9.966834335380814e-06
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | -- intersect: -1080590255.4128017
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | current memory leak: 0.62 B/s (using 118 data points, chi2=0.00)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | could have reported an average CPU frequency of 3200 MHz (9 samples)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | ..............................
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | . Timing measurements:
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | . get job = 0 s
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | . initial setup = 7 s
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | . payload setup = 5 s
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | . stage-in = 0 s
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | . payload execution = 10597 s
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | . stage-out = 0 s
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | . log creation = 0 s
[2025-10-17 11:03:09] 2025-10-17 10:02:37,191 | INFO     | ..............................
[2025-10-17 11:03:09] 2025-10-17 10:02:37,387 | INFO     | PID=23795 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 11:03:09] 2025-10-17 10:02:37,603 | INFO     | 
[2025-10-17 11:03:09] 2025-10-17 10:02:37,603 | INFO     | job summary report
[2025-10-17 11:03:09] 2025-10-17 10:02:37,604 | INFO     | --------------------------------------------------
[2025-10-17 11:03:09] 2025-10-17 10:02:37,604 | INFO     | PanDA job id: 6847329191
[2025-10-17 11:03:09] 2025-10-17 10:02:37,604 | INFO     | task id: 46771637
[2025-10-17 11:03:09] 2025-10-17 10:02:37,604 | INFO     | errors: (none)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,604 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 11:03:09] 2025-10-17 10:02:37,605 | INFO     | pilot state: finished 
[2025-10-17 11:03:09] 2025-10-17 10:02:37,605 | INFO     | transexitcode: 0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,605 | INFO     | exeerrorcode: 0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,605 | INFO     | exeerrordiag: 
[2025-10-17 11:03:09] 2025-10-17 10:02:37,605 | INFO     | exitcode: 0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,605 | INFO     | exitmsg: OK
[2025-10-17 11:03:09] 2025-10-17 10:02:37,606 | INFO     | cpuconsumptiontime: 40942 s
[2025-10-17 11:03:09] 2025-10-17 10:02:37,606 | INFO     | nevents: 400
[2025-10-17 11:03:09] 2025-10-17 10:02:37,606 | INFO     | neventsw: 0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,606 | INFO     | pid: 30161
[2025-10-17 11:03:09] 2025-10-17 10:02:37,606 | INFO     | pgrp: 30161
[2025-10-17 11:03:09] 2025-10-17 10:02:37,606 | INFO     | corecount: 4
[2025-10-17 11:03:09] 2025-10-17 10:02:37,607 | INFO     | event service: False
[2025-10-17 11:03:09] 2025-10-17 10:02:37,607 | INFO     | sizes: {0: 2348926, 3: 2349188, 11: 2349216, 10608: 2387179, 10616: 2387381}
[2025-10-17 11:03:09] 2025-10-17 10:02:37,607 | INFO     | --------------------------------------------------
[2025-10-17 11:03:09] 2025-10-17 10:02:37,607 | INFO     | 
[2025-10-17 11:03:09] 2025-10-17 10:02:37,607 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-17 11:03:09] 2025-10-17 10:02:37,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,618 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,618 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,619 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 11:03:09] 2025-10-17 10:02:37,620 | INFO     | job 6847329191 has completed (purged errors)
[2025-10-17 11:03:09] 2025-10-17 10:02:37,620 | INFO     | overall cleanup function is called
[2025-10-17 11:03:09] 2025-10-17 10:02:38,627 | INFO     | --- collectZombieJob: --- 10, [30161]
[2025-10-17 11:03:09] 2025-10-17 10:02:38,627 | INFO     | zombie collector waiting for pid 30161
[2025-10-17 11:03:09] 2025-10-17 10:02:38,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 11:03:09] 2025-10-17 10:02:38,628 | INFO     | collected zombie processes
[2025-10-17 11:03:09] 2025-10-17 10:02:38,628 | INFO     | will attempt to kill all subprocesses of pid=30161
[2025-10-17 11:03:09] 2025-10-17 10:02:38,687 | INFO     | process IDs to be killed: [30161] (in reverse order)
[2025-10-17 11:03:09] 2025-10-17 10:02:38,713 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 11:03:09] 2025-10-17 10:02:38,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 11:03:09] 2025-10-17 10:02:38,715 | INFO     | did not find any defunct processes belonging to 30161
[2025-10-17 11:03:09] 2025-10-17 10:02:38,717 | INFO     | did not find any defunct processes belonging to 30161
[2025-10-17 11:03:09] 2025-10-17 10:02:38,717 | INFO     | ready for new job
[2025-10-17 11:03:09] 2025-10-17 10:02:38,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 11:03:09] 2025-10-17 10:02:38,718 | INFO     | ***************************************
[2025-10-17 11:03:09] 2025-10-17 10:02:38,718 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 11:03:09] 2025-10-17 10:02:38,718 | INFO     | ***************************************
[2025-10-17 11:03:09] 2025-10-17 10:02:38,718 | INFO     | 
[2025-10-17 11:03:09] 2025-10-17 10:02:38,736 | INFO     | architecture information:
[2025-10-17 11:03:09] 2025-10-17 10:02:38,737 | INFO     | executing command: cat /etc/os-release
[2025-10-17 11:03:09] 2025-10-17 10:02:38,743 | INFO     | cat /etc/os-release:
[2025-10-17 11:03:09] NAME="CentOS Linux"
[2025-10-17 11:03:09] VERSION="7 (Core)"
[2025-10-17 11:03:09] ID="centos"
[2025-10-17 11:03:09] ID_LIKE="rhel fedora"
[2025-10-17 11:03:09] VERSION_ID="7"
[2025-10-17 11:03:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 11:03:09] ANSI_COLOR="0;31"
[2025-10-17 11:03:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 11:03:09] HOME_URL="https://www.centos.org/"
[2025-10-17 11:03:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 11:03:09] 
[2025-10-17 11:03:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 11:03:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 11:03:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 11:03:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 11:03:09] 
[2025-10-17 11:03:09] 2025-10-17 10:02:38,743 | INFO     | ***************************************
[2025-10-17 11:03:09] 2025-10-17 10:02:39,247 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-17 11:03:09] 2025-10-17 10:02:39,257 | INFO     | sufficient remaining disk space (432660283392 B)
[2025-10-17 11:03:09] 2025-10-17 10:02:39,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 11:03:09] 2025-10-17 10:02:39,257 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 11:03:09] 2025-10-17 10:02:39,257 | INFO     | update_server=False
[2025-10-17 11:03:09] 2025-10-17 10:02:39,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 11:03:09] 2025-10-17 10:02:39,569 | INFO     | all job control threads have been joined
[2025-10-17 11:03:09] 2025-10-17 10:02:39,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 11:03:09] 2025-10-17 10:02:39,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 11:03:09] 2025-10-17 10:02:40,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 11:03:09] 2025-10-17 10:02:40,062 | INFO     | aborting loop
[2025-10-17 11:03:09] 2025-10-17 10:02:40,149 | INFO     | all data control threads have been joined
[2025-10-17 11:03:09] 2025-10-17 10:02:40,263 | INFO     | [job] retrieve thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:40,284 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:40,285 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:40,575 | INFO     | [job] control thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:40,576 | INFO     | all payload control threads have been joined
[2025-10-17 11:03:09] 2025-10-17 10:02:41,001 | INFO     | [payload] validate_post thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:41,068 | INFO     | [job] job monitor thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:41,155 | INFO     | [data] control thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:41,273 | INFO     | [data] copytool_in thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:41,341 | INFO     | [payload] failed_post thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:41,582 | INFO     | [payload] control thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:41,664 | INFO     | [job] validate thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:41,743 | INFO     | [data] copytool_out thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:41,756 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:41,760 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:42,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 11:03:09] 2025-10-17 10:02:43,251 | INFO     | [job] queue monitor thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:43,779 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 11:03:09] 2025-10-17 10:02:45,024 | INFO     | [monitor] cgroup control has ended
[2025-10-17 11:03:09] 2025-10-17 10:02:45,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139897803659072)>', '<ExcThread(monitor, started 139897142765312)>']
[2025-10-17 11:03:09] 2025-10-17 10:02:50,152 | INFO     | all workflow threads have been joined
[2025-10-17 11:03:09] 2025-10-17 10:02:50,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 11:03:09] 2025-10-17 10:02:50,153 | INFO     | traces error code: 0
[2025-10-17 11:03:09] 2025-10-17 10:02:50,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 11:03:09] 2025-10-17 10:03:08,432 | INFO     | 10636s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-17 11:03:09] 2025-10-17 10:03:09,503 | INFO     | PID=23795 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 11:03:09] 2025-10-17 10:03:09,503 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 11:03:09] 2025-10-17 10:03:09,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 11:03:09] 2025-10-17 10:03:09,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 11:03:09] 2025-10-17 10:03:09,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 11:03:09] 2025-10-17 10:03:09,503 | CRITICAL | thread 'MainThread' is not alive
[2025-10-17 11:03:09] 2025-10-17 10:03:09,503 | INFO     | [monitor] control thread has ended
[2025-10-17 11:03:09] 2025-10-17 10:03:09,595 [wrapper] ==== pilot stdout END ====
[2025-10-17 11:03:09] 2025-10-17 10:03:09,597 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 11:03:09] 2025-10-17 10:03:09,599 [wrapper] pilotpid: 23795
[2025-10-17 11:03:09] 2025-10-17 10:03:09,601 [wrapper] Pilot exit status: 0
[2025-10-17 11:03:09] 2025-10-17 10:03:09,614 [wrapper] pandaids: 6847329191
[2025-10-17 11:03:09] 2025-10-17 10:03:09,629 [wrapper] cleanup supervisor_pilot 17935 23796
[2025-10-17 11:03:09] 2025-10-17 10:03:09,631 [wrapper] Test setup, not cleaning
[2025-10-17 11:03:09] 2025-10-17 10:03:09,633 [wrapper] apfmon messages muted
[2025-10-17 11:03:09] 2025-10-17 10:03:09,635 [wrapper] ==== wrapper stdout END ====
[2025-10-17 11:03:09] 2025-10-17 10:03:09,637 [wrapper] ==== wrapper stderr END ====
[2025-10-17 11:03:09]  *** Error codes and diagnostics ***
[2025-10-17 11:03:09]     "exeErrorCode": 0,
[2025-10-17 11:03:09]     "exeErrorDiag": "",
[2025-10-17 11:03:09]     "pilotErrorCode": 0,
[2025-10-17 11:03:09]     "pilotErrorDiag": "",
[2025-10-17 11:03:09]  *** Listing of results directory ***
[2025-10-17 11:03:09] total 428572
[2025-10-17 11:03:09] -rw-r--r-- 1 m m    557409 Oct 16 19:31 pilot3.tar.gz
[2025-10-17 11:03:09] -rwx------ 1 m m     36292 Oct 16 20:26 runpilot2-wrapper.sh
[2025-10-17 11:03:09] -rw-r--r-- 1 m m      5112 Oct 16 20:26 queuedata.json
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m       100 Oct 17 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 11:03:09] -rwxr-xr-x 1 m m      7986 Oct 17 08:04 run_atlas
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m       105 Oct 17 08:04 job.xml
[2025-10-17 11:03:09] -rw-r--r-- 2 m m     15120 Oct 17 08:04 start_atlas.sh
[2025-10-17 11:03:09] drwxrwx--x 2 m m      4096 Oct 17 08:04 shared
[2025-10-17 11:03:09] -rw-r--r-- 2 m m    569676 Oct 17 08:04 input.tar.gz
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m      5963 Oct 17 08:04 init_data.xml
[2025-10-17 11:03:09] -rw-r--r-- 2 m m 227694847 Oct 17 08:04 EVNT.46771634._000701.pool.root.1
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m         0 Oct 17 08:04 boinc_lockfile
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m      2557 Oct 17 08:05 pandaJob.out
[2025-10-17 11:03:09] -rw------- 1 m m    976726 Oct 17 08:05 agis_schedconf.cvmfs.json
[2025-10-17 11:03:09] -rw------- 1 m m   1560740 Oct 17 08:05 agis_ddmendpoints.agis.ALL.json
[2025-10-17 11:03:09] drwx------ 5 m m      4096 Oct 17 08:05 pilot3
[2025-10-17 11:03:09] -rw------- 1 m m 203552950 Oct 17 11:02 HITS.46771637._016933.pool.root.1
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m       530 Oct 17 11:02 boinc_task_state.xml
[2025-10-17 11:03:09] -rw------- 1 m m      1033 Oct 17 11:02 memory_monitor_summary.json
[2025-10-17 11:03:09] -rw------- 1 m m    353744 Oct 17 11:02 log.46771637._016933.job.log.tgz.1
[2025-10-17 11:03:09] -rw------- 1 m m        95 Oct 17 11:02 pilot_heartbeat.json
[2025-10-17 11:03:09] -rw------- 1 m m      7789 Oct 17 11:02 heartbeat.json
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m      8192 Oct 17 11:02 boinc_mmap_file
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m        28 Oct 17 11:02 wrapper_checkpoint.txt
[2025-10-17 11:03:09] -rw------- 1 m m       931 Oct 17 11:03 pilotlog.txt
[2025-10-17 11:03:09] -rw------- 1 m m   1499410 Oct 17 11:03 log.46771637._016933.job.log.1
[2025-10-17 11:03:09] -rw------- 1 m m       357 Oct 17 11:03 output.list
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m       620 Oct 17 11:03 runtime_log
[2025-10-17 11:03:09] -rw------- 1 m m   1873920 Oct 17 11:03 result.tar.gz
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m      8618 Oct 17 11:03 runtime_log.err
[2025-10-17 11:03:09] -rw------- 1 m m       644 Oct 17 11:03 rJhNDmxniT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvyYMDmN1p0um.diag
[2025-10-17 11:03:09] -rw-rw-r-- 1 m m     20721 Oct 17 11:03 stderr.txt
[2025-10-17 11:03:09] HITS file was successfully produced:
[2025-10-17 11:03:09] -rw------- 1 m m 203552950 Oct 17 11:02 shared/HITS.pool.root.1
[2025-10-17 11:03:09]  *** Contents of shared directory: ***
[2025-10-17 11:03:09] total 423556
[2025-10-17 11:03:09] -rw-r--r-- 2 m m     15120 Oct 17 08:04 start_atlas.sh
[2025-10-17 11:03:09] -rw-r--r-- 2 m m    569676 Oct 17 08:04 input.tar.gz
[2025-10-17 11:03:09] -rw-r--r-- 2 m m 227694847 Oct 17 08:04 ATLAS.root_0
[2025-10-17 11:03:09] -rw------- 1 m m 203552950 Oct 17 11:02 HITS.pool.root.1
[2025-10-17 11:03:09] -rw------- 1 m m   1873920 Oct 17 11:03 result.tar.gz
11:03:10 (19478): run_atlas exited; CPU time 41049.358847
11:03:10 (19478): called boinc_finish(0)

</stderr_txt>
]]>

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