Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
07:54:27 (19912): wrapper (7.7.26015): starting
07:54:27 (19912): wrapper: running run_atlas (--nthreads 4)
[2025-10-17 07:54:27] Arguments: --nthreads 4
[2025-10-17 07:54:27] Threads: 4
[2025-10-17 07:54:27] Checking for CVMFS
[2025-10-17 07:55:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 07:55:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 07:55:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 07:55:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 07:55:57] 2.11.5.0 20135 1 23556 151807 3 1 3921602 4194305 0 130560 0 0 0.000 1291 26 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-17 07:55:57] CVMFS is ok
[2025-10-17 07:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 07:55:57] Checking for apptainer binary...
[2025-10-17 07:55:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 07:55:57] Running /usr/bin/apptainer --version
[2025-10-17 07:55:58] apptainer version 1.0.3
[2025-10-17 07:55:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 07:55:59] TeeC20
[2025-10-17 07:55:59] apptainer works
[2025-10-17 07:55:59] Set ATHENA_PROC_NUMBER=4
[2025-10-17 07:55:59] Set ATHENA_CORE_NUMBER=4
[2025-10-17 07:55:59] Starting ATLAS job with PandaID=6847307582
[2025-10-17 07:55:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 11:26:18]  *** The last 200 lines of the pilot log: ***
[2025-10-17 11:26:18] 2025-10-17 10:25:31,777 | INFO     | PID=24236 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 11:26:18] 2025-10-17 10:25:32,778 | INFO     | time since job start (12400s) is within the limit (172800.0s)
[2025-10-17 11:26:18] 2025-10-17 10:25:33,308 | INFO     | monitor loop #949: job 0:6847307582 is in state 'finished'
[2025-10-17 11:26:18] 2025-10-17 10:25:33,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-17 11:26:18] 2025-10-17 10:25:34,551 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-17 11:26:18] 2025-10-17 10:25:34,551 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3348.435
[2025-10-17 11:26:18] 2025-10-17 10:25:34,552 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6847307582/memory_monitor_summary.json (trf name=prmon)
[2025-10-17 11:26:18] 2025-10-17 10:25:34,552 | INFO     | extracted standard info from prmon json
[2025-10-17 11:26:18] 2025-10-17 10:25:34,552 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 11:26:18] 2025-10-17 10:25:34,552 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 11:26:18] 2025-10-17 10:25:34,553 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 11:26:18] 2025-10-17 10:25:34,553 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 11:26:18] 2025-10-17 10:25:34,554 | INFO     | fitting pss+swap vs Time
[2025-10-17 11:26:18] 2025-10-17 10:25:34,554 | INFO     | sum of square deviations: 2555770710.5
[2025-10-17 11:26:18] 2025-10-17 10:25:34,555 | INFO     | sum of deviations: 17543659993.499977
[2025-10-17 11:26:18] 2025-10-17 10:25:34,555 | INFO     | mean x: 1760690494.5
[2025-10-17 11:26:18] 2025-10-17 10:25:34,555 | INFO     | mean y: 2336294.8168316833
[2025-10-17 11:26:18] 2025-10-17 10:25:34,555 | INFO     | -- intersect: -12083628718.55182
[2025-10-17 11:26:18] 2025-10-17 10:25:34,555 | INFO     | intersect: -12083628718.55182
[2025-10-17 11:26:18] 2025-10-17 10:25:34,555 | INFO     | chi2: 3.3941531188130414
[2025-10-17 11:26:18] 2025-10-17 10:25:34,555 | INFO     | sum of square deviations: 2370641658.0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,556 | INFO     | sum of deviations: 28674123783.000004
[2025-10-17 11:26:18] 2025-10-17 10:25:34,556 | INFO     | mean x: 1760690342.0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,556 | INFO     | mean y: 2345270.152284264
[2025-10-17 11:26:18] 2025-10-17 10:25:34,556 | INFO     | -- intersect: -21294105266.633404
[2025-10-17 11:26:18] 2025-10-17 10:25:34,556 | INFO     | intersect: -21294105266.633404
[2025-10-17 11:26:18] 2025-10-17 10:25:34,556 | INFO     | chi2: 2.753546768197649
[2025-10-17 11:26:18] 2025-10-17 10:25:34,556 | INFO     | current chi2=2.753546768197649 (change=18.8738200131471 %)
[2025-10-17 11:26:18] 2025-10-17 10:25:34,556 | INFO     | right removable region: 196
[2025-10-17 11:26:18] 2025-10-17 10:25:34,557 | INFO     | sum of square deviations: 2370641658.0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,557 | INFO     | sum of deviations: -29134299914.0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,557 | INFO     | mean x: 1760690647.0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,557 | INFO     | mean y: 2374576.83248731
[2025-10-17 11:26:18] 2025-10-17 10:25:34,557 | INFO     | -- intersect: 21640604543.966858
[2025-10-17 11:26:18] 2025-10-17 10:25:34,557 | INFO     | intersect: 21640604543.966858
[2025-10-17 11:26:18] 2025-10-17 10:25:34,557 | INFO     | chi2: 0.9087908281151253
[2025-10-17 11:26:18] 2025-10-17 10:25:34,557 | INFO     | current chi2=0.9087908281151253 (change=73.22481348652485 %)
[2025-10-17 11:26:18] 2025-10-17 10:25:34,558 | INFO     | sum of square deviations: 2194675568.0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,558 | INFO     | sum of deviations: -21727221498.999996
[2025-10-17 11:26:18] 2025-10-17 10:25:34,558 | INFO     | mean x: 1760690799.5
[2025-10-17 11:26:18] 2025-10-17 10:25:34,558 | INFO     | mean y: 2368105.3020833335
[2025-10-17 11:26:18] 2025-10-17 10:25:34,558 | INFO     | -- intersect: 17433153570.713474
[2025-10-17 11:26:18] 2025-10-17 10:25:34,558 | INFO     | intersect: 17433153570.713474
[2025-10-17 11:26:18] 2025-10-17 10:25:34,558 | INFO     | chi2: 0.856728587541164
[2025-10-17 11:26:18] 2025-10-17 10:25:34,558 | INFO     | current chi2=0.856728587541164 (change=5.728737456774391 %)
[2025-10-17 11:26:18] 2025-10-17 10:25:34,558 | INFO     | left removable region: 20
[2025-10-17 11:26:18] 2025-10-17 10:25:34,559 | INFO     | sum of square deviations: 1690450300.0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,559 | INFO     | sum of deviations: 4486179882.500001
[2025-10-17 11:26:18] 2025-10-17 10:25:34,559 | INFO     | mean x: 1760690921.5
[2025-10-17 11:26:18] 2025-10-17 10:25:34,559 | INFO     | mean y: 2364055.721590909
[2025-10-17 11:26:18] 2025-10-17 10:25:34,559 | INFO     | -- intersect: -4670223000.717566
[2025-10-17 11:26:18] 2025-10-17 10:25:34,559 | INFO     | intersect: -4670223000.717566
[2025-10-17 11:26:18] 2025-10-17 10:25:34,559 | INFO     | chi2: 0.0008265746001737811
[2025-10-17 11:26:18] 2025-10-17 10:25:34,559 | INFO     | -- intersect: -4670223000.717566
[2025-10-17 11:26:18] 2025-10-17 10:25:34,559 | INFO     | current memory leak: 2.65 B/s (using 176 data points, chi2=0.00)
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | could have reported an average CPU frequency of 3110 MHz (10 samples)
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | ..............................
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | . Timing measurements:
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | . get job = 0 s
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | . initial setup = 28 s
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | . payload setup = 5 s
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | . stage-in = 0 s
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | . payload execution = 12276 s
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | . stage-out = 3 s
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | . log creation = 0 s
[2025-10-17 11:26:18] 2025-10-17 10:25:34,560 | INFO     | ..............................
[2025-10-17 11:26:18] 2025-10-17 10:25:34,602 | INFO     | 
[2025-10-17 11:26:18] 2025-10-17 10:25:34,602 | INFO     | job summary report
[2025-10-17 11:26:18] 2025-10-17 10:25:34,602 | INFO     | --------------------------------------------------
[2025-10-17 11:26:18] 2025-10-17 10:25:34,602 | INFO     | PanDA job id: 6847307582
[2025-10-17 11:26:18] 2025-10-17 10:25:34,602 | INFO     | task id: 46771637
[2025-10-17 11:26:18] 2025-10-17 10:25:34,602 | INFO     | errors: (none)
[2025-10-17 11:26:18] 2025-10-17 10:25:34,602 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 11:26:18] 2025-10-17 10:25:34,602 | INFO     | pilot state: finished 
[2025-10-17 11:26:18] 2025-10-17 10:25:34,602 | INFO     | transexitcode: 0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,602 | INFO     | exeerrorcode: 0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | exeerrordiag: 
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | exitcode: 0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | exitmsg: OK
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | cpuconsumptiontime: 47091 s
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | nevents: 400
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | neventsw: 0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | pid: 30603
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | pgrp: 30603
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | corecount: 4
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | event service: False
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | sizes: {0: 2348923, 11: 2348923, 13: 2349213, 22: 2349269, 12286: 2379075, 12290: 2388071, 12293: 2388255, 12380: 2388449}
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | --------------------------------------------------
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | 
[2025-10-17 11:26:18] 2025-10-17 10:25:34,603 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 11:26:18] 2025-10-17 10:25:34,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 11:26:18] 2025-10-17 10:25:34,611 | INFO     | job 6847307582 has completed (purged errors)
[2025-10-17 11:26:18] 2025-10-17 10:25:34,611 | INFO     | overall cleanup function is called
[2025-10-17 11:26:18] 2025-10-17 10:25:35,617 | INFO     | --- collectZombieJob: --- 10, [30603]
[2025-10-17 11:26:18] 2025-10-17 10:25:35,617 | INFO     | zombie collector waiting for pid 30603
[2025-10-17 11:26:18] 2025-10-17 10:25:35,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 11:26:18] 2025-10-17 10:25:35,618 | INFO     | collected zombie processes
[2025-10-17 11:26:18] 2025-10-17 10:25:35,618 | INFO     | will attempt to kill all subprocesses of pid=30603
[2025-10-17 11:26:18] 2025-10-17 10:25:35,665 | INFO     | process IDs to be killed: [30603] (in reverse order)
[2025-10-17 11:26:18] 2025-10-17 10:25:35,685 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 11:26:18] 2025-10-17 10:25:35,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 11:26:18] 2025-10-17 10:25:35,686 | INFO     | did not find any defunct processes belonging to 30603
[2025-10-17 11:26:18] 2025-10-17 10:25:35,688 | INFO     | did not find any defunct processes belonging to 30603
[2025-10-17 11:26:18] 2025-10-17 10:25:35,688 | INFO     | ready for new job
[2025-10-17 11:26:18] 2025-10-17 10:25:35,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 11:26:18] 2025-10-17 10:25:35,689 | INFO     | ***************************************
[2025-10-17 11:26:18] 2025-10-17 10:25:35,689 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 11:26:18] 2025-10-17 10:25:35,689 | INFO     | ***************************************
[2025-10-17 11:26:18] 2025-10-17 10:25:35,689 | INFO     | 
[2025-10-17 11:26:18] 2025-10-17 10:25:35,708 | INFO     | architecture information:
[2025-10-17 11:26:18] 2025-10-17 10:25:35,708 | INFO     | executing command: cat /etc/os-release
[2025-10-17 11:26:18] 2025-10-17 10:25:35,717 | INFO     | cat /etc/os-release:
[2025-10-17 11:26:18] NAME="CentOS Linux"
[2025-10-17 11:26:18] VERSION="7 (Core)"
[2025-10-17 11:26:18] ID="centos"
[2025-10-17 11:26:18] ID_LIKE="rhel fedora"
[2025-10-17 11:26:18] VERSION_ID="7"
[2025-10-17 11:26:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 11:26:18] ANSI_COLOR="0;31"
[2025-10-17 11:26:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 11:26:18] HOME_URL="https://www.centos.org/"
[2025-10-17 11:26:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 11:26:18] 
[2025-10-17 11:26:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 11:26:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 11:26:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 11:26:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 11:26:18] 
[2025-10-17 11:26:18] 2025-10-17 10:25:35,717 | INFO     | ***************************************
[2025-10-17 11:26:18] 2025-10-17 10:25:36,220 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-17 11:26:18] 2025-10-17 10:25:36,229 | INFO     | sufficient remaining disk space (417572323328 B)
[2025-10-17 11:26:18] 2025-10-17 10:25:36,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 11:26:18] 2025-10-17 10:25:36,230 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 11:26:18] 2025-10-17 10:25:36,230 | INFO     | update_server=False
[2025-10-17 11:26:18] 2025-10-17 10:25:36,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 11:26:18] 2025-10-17 10:25:36,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 11:26:18] 2025-10-17 10:25:36,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 11:26:18] 2025-10-17 10:25:36,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 11:26:18] 2025-10-17 10:25:36,425 | INFO     | all job control threads have been joined
[2025-10-17 11:26:18] 2025-10-17 10:25:36,515 | INFO     | all data control threads have been joined
[2025-10-17 11:26:18] 2025-10-17 10:25:36,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 11:26:18] 2025-10-17 10:25:36,817 | INFO     | aborting loop
[2025-10-17 11:26:18] 2025-10-17 10:25:37,000 | INFO     | all payload control threads have been joined
[2025-10-17 11:26:18] 2025-10-17 10:25:37,236 | INFO     | [job] retrieve thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:37,236 | INFO     | [job] queue monitor thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:37,431 | INFO     | [job] control thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:37,520 | INFO     | [data] control thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:37,680 | INFO     | [data] copytool_in thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:37,696 | INFO     | [job] validate thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:37,822 | INFO     | [job] job monitor thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:37,830 | INFO     | [payload] failed_post thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:38,005 | INFO     | [payload] control thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:38,052 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:38,236 | INFO     | [data] copytool_out thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:38,359 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:38,370 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:38,380 | INFO     | [payload] validate_post thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:38,689 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:25:40,237 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 11:26:18] 2025-10-17 10:26:05,926 | INFO     | PID=24236 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 11:26:18] 2025-10-17 10:26:05,927 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 11:26:18] 2025-10-17 10:26:05,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 11:26:18] 2025-10-17 10:26:05,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 11:26:18] 2025-10-17 10:26:11,736 | INFO     | [monitor] cgroup control has ended
[2025-10-17 11:26:18] 2025-10-17 10:26:13,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109100164928)>', '<ExcThread(monitor, started 140108518901504)>']
[2025-10-17 11:26:18] 2025-10-17 10:26:13,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 11:26:18] 2025-10-17 10:26:13,968 | INFO     | [monitor] control thread has ended
[2025-10-17 11:26:18] 2025-10-17 10:26:18,683 | INFO     | all workflow threads have been joined
[2025-10-17 11:26:18] 2025-10-17 10:26:18,684 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 11:26:18] 2025-10-17 10:26:18,684 | INFO     | traces error code: 0
[2025-10-17 11:26:18] 2025-10-17 10:26:18,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 11:26:18] 2025-10-17 10:26:18,767 [wrapper] ==== pilot stdout END ====
[2025-10-17 11:26:18] 2025-10-17 10:26:18,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 11:26:18] 2025-10-17 10:26:18,770 [wrapper] pilotpid: 24236
[2025-10-17 11:26:18] 2025-10-17 10:26:18,772 [wrapper] Pilot exit status: 0
[2025-10-17 11:26:18] 2025-10-17 10:26:18,799 [wrapper] pandaids: 6847307582
[2025-10-17 11:26:18] 2025-10-17 10:26:18,817 [wrapper] cleanup supervisor_pilot 21230 24237
[2025-10-17 11:26:18] 2025-10-17 10:26:18,819 [wrapper] Test setup, not cleaning
[2025-10-17 11:26:18] 2025-10-17 10:26:18,820 [wrapper] apfmon messages muted
[2025-10-17 11:26:18] 2025-10-17 10:26:18,821 [wrapper] ==== wrapper stdout END ====
[2025-10-17 11:26:18] 2025-10-17 10:26:18,822 [wrapper] ==== wrapper stderr END ====
[2025-10-17 11:26:18]  *** Error codes and diagnostics ***
[2025-10-17 11:26:18]     "exeErrorCode": 0,
[2025-10-17 11:26:18]     "exeErrorDiag": "",
[2025-10-17 11:26:18]     "pilotErrorCode": 0,
[2025-10-17 11:26:18]     "pilotErrorDiag": "",
[2025-10-17 11:26:18]  *** Listing of results directory ***
[2025-10-17 11:26:18] total 432736
[2025-10-17 11:26:18] -rw-r--r-- 1 m m    557409 Oct 16 11:43 pilot3.tar.gz
[2025-10-17 11:26:18] -rw-r--r-- 1 m m      5112 Oct 16 12:17 queuedata.json
[2025-10-17 11:26:18] -rwx------ 1 m m     36292 Oct 16 12:18 runpilot2-wrapper.sh
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m       100 Oct 17 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 11:26:18] -rwxr-xr-x 1 m m      7986 Oct 17 07:54 run_atlas
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m       105 Oct 17 07:54 job.xml
[2025-10-17 11:26:18] -rw-r--r-- 2 m m     15120 Oct 17 07:54 start_atlas.sh
[2025-10-17 11:26:18] drwxrwx--x 2 m m      4096 Oct 17 07:54 shared
[2025-10-17 11:26:18] -rw-r--r-- 2 m m    569677 Oct 17 07:54 input.tar.gz
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m      5884 Oct 17 07:54 init_data.xml
[2025-10-17 11:26:18] -rw-r--r-- 2 m m 228311315 Oct 17 07:54 EVNT.46771634._000373.pool.root.1
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m         0 Oct 17 07:54 boinc_lockfile
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m      2556 Oct 17 07:55 pandaJob.out
[2025-10-17 11:26:18] -rw------- 1 m m    976726 Oct 17 07:58 agis_schedconf.cvmfs.json
[2025-10-17 11:26:18] drwx------ 5 m m      4096 Oct 17 07:58 pilot3
[2025-10-17 11:26:18] -rw------- 1 m m 206721702 Oct 17 11:23 HITS.46771637._008698.pool.root.1
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m       530 Oct 17 11:23 boinc_task_state.xml
[2025-10-17 11:26:18] -rw------- 1 m m      1028 Oct 17 11:23 memory_monitor_summary.json
[2025-10-17 11:26:18] -rw------- 1 m m   1560740 Oct 17 11:24 agis_ddmendpoints.agis.ALL.json
[2025-10-17 11:26:18] -rw------- 1 m m    365357 Oct 17 11:24 log.46771637._008698.job.log.tgz.1
[2025-10-17 11:26:18] -rw------- 1 m m      7783 Oct 17 11:25 heartbeat.json
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m      8192 Oct 17 11:26 boinc_mmap_file
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m        28 Oct 17 11:26 wrapper_checkpoint.txt
[2025-10-17 11:26:18] -rw------- 1 m m        95 Oct 17 11:26 pilot_heartbeat.json
[2025-10-17 11:26:18] -rw------- 1 m m      4746 Oct 17 11:26 pilotlog.txt
[2025-10-17 11:26:18] -rw------- 1 m m   1727648 Oct 17 11:26 log.46771637._008698.job.log.1
[2025-10-17 11:26:18] -rw------- 1 m m       357 Oct 17 11:26 output.list
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m       620 Oct 17 11:26 runtime_log
[2025-10-17 11:26:18] -rw------- 1 m m   2109440 Oct 17 11:26 result.tar.gz
[2025-10-17 11:26:18] -rw------- 1 m m       644 Oct 17 11:26 T8WMDmJBbT8n9Rq4apOajLDm4fhM0noT9bVof3QYDm56XMDmrTRSwm.diag
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m      8618 Oct 17 11:26 runtime_log.err
[2025-10-17 11:26:18] -rw-rw-r-- 1 m m     20884 Oct 17 11:26 stderr.txt
[2025-10-17 11:26:18] HITS file was successfully produced:
[2025-10-17 11:26:18] -rw------- 1 m m 206721702 Oct 17 11:23 shared/HITS.pool.root.1
[2025-10-17 11:26:18]  *** Contents of shared directory: ***
[2025-10-17 11:26:18] total 427484
[2025-10-17 11:26:18] -rw-r--r-- 2 m m     15120 Oct 17 07:54 start_atlas.sh
[2025-10-17 11:26:18] -rw-r--r-- 2 m m    569677 Oct 17 07:54 input.tar.gz
[2025-10-17 11:26:18] -rw-r--r-- 2 m m 228311315 Oct 17 07:54 ATLAS.root_0
[2025-10-17 11:26:18] -rw------- 1 m m 206721702 Oct 17 11:23 HITS.pool.root.1
[2025-10-17 11:26:18] -rw------- 1 m m   2109440 Oct 17 11:26 result.tar.gz
11:26:20 (19912): run_atlas exited; CPU time 47223.007315
11:26:20 (19912): called boinc_finish(0)

</stderr_txt>
]]>

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