Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:39 (975755): wrapper (7.7.26015): starting
10:30:39 (975755): wrapper: running run_atlas (--nthreads 3)
[2025-10-17 10:30:39] Arguments: --nthreads 3
[2025-10-17 10:30:39] Threads: 3
[2025-10-17 10:30:39] Checking for CVMFS
[2025-10-17 10:30:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 10:30:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 10:30:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 10:30:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 10:30:39] 2.9.2.0 114619 1804 66924 151808 0 57 3468200 36864001 0 130560 0 1210435 99.988 67988 2354 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-17 10:30:39] CVMFS is ok
[2025-10-17 10:30:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 10:30:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 10:30:39] Further information can be found at the LHC@home message board.
[2025-10-17 10:30:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 10:30:39] Checking for apptainer binary...
[2025-10-17 10:30:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 10:30:39] Running /usr/bin/apptainer --version
[2025-10-17 10:30:39] apptainer version 1.4.1-1.1
[2025-10-17 10:30:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 10:30:39] atlasA221b
[2025-10-17 10:30:39] apptainer works
[2025-10-17 10:30:39] Set ATHENA_PROC_NUMBER=3
[2025-10-17 10:30:39] Set ATHENA_CORE_NUMBER=3
[2025-10-17 10:30:40] Starting ATLAS job with PandaID=6846998122
[2025-10-17 10:30:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 12:20:06]  *** The last 200 lines of the pilot log: ***
[2025-10-17 12:20:06] 2025-10-17 10:19:35,986 | INFO     | sufficient remaining disk space (357149179904 B)
[2025-10-17 12:20:06] 2025-10-17 10:19:35,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 12:20:06] 2025-10-17 10:19:35,986 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 12:20:06] 2025-10-17 10:19:35,986 | INFO     | update_server=False
[2025-10-17 12:20:06] 2025-10-17 10:19:35,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 12:20:06] 2025-10-17 10:19:35,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 12:20:06] 2025-10-17 10:19:35,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 12:20:06] 2025-10-17 10:19:35,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 12:20:06] 2025-10-17 10:19:35,986 | INFO     | aborting loop
[2025-10-17 12:20:06] 2025-10-17 10:19:36,078 | INFO     | all job control threads have been joined
[2025-10-17 12:20:06] 2025-10-17 10:19:36,288 | INFO     | all payload control threads have been joined
[2025-10-17 12:20:06] 2025-10-17 10:19:36,991 | INFO     | [job] retrieve thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:36,991 | INFO     | all data control threads have been joined
[2025-10-17 12:20:06] 2025-10-17 10:19:36,992 | INFO     | [job] job monitor thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:36,993 | INFO     | [job] queue monitor thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:37,045 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:37,068 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:37,084 | INFO     | [job] control thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:37,152 | INFO     | [payload] validate_post thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:37,294 | INFO     | [payload] control thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:37,848 | INFO     | [payload] failed_post thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:37,853 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:37,855 | INFO     | [data] copytool_in thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:37,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 12:20:06] 2025-10-17 10:19:37,991 | INFO     | [data] copytool_out thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:37,997 | INFO     | [data] control thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:38,366 | INFO     | [job] validate thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:41,912 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:46,266 | INFO     | job.realtimelogging is not enabled
[2025-10-17 12:20:06] 2025-10-17 10:19:47,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 12:20:06] 2025-10-17 10:19:59,567 | INFO     | [monitor] cgroup control has ended
[2025-10-17 12:20:06] 2025-10-17 10:20:01,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150118381376)>', '<ExcThread(monitor, started 140149363021568)>']
[2025-10-17 12:20:06] 2025-10-17 10:20:06,142 | INFO     | PID=979486 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-17 12:20:06] 2025-10-17 10:20:06,142 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 12:20:06] 2025-10-17 10:20:06,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 12:20:06] 2025-10-17 10:20:06,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 12:20:06] 2025-10-17 10:20:06,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 12:20:06] 2025-10-17 10:20:06,143 | INFO     | [monitor] control thread has ended
[2025-10-17 12:20:06] 2025-10-17 10:20:06,236 | INFO     | all workflow threads have been joined
[2025-10-17 12:20:06] 2025-10-17 10:20:06,236 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 12:20:06] 2025-10-17 10:20:06,236 | INFO     | traces error code: 0
[2025-10-17 12:20:06] 2025-10-17 10:20:06,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 12:20:06] 2025-10-17 10:20:06,341 [wrapper] ==== pilot stdout END ====
[2025-10-17 12:20:06] 2025-10-17 10:20:06,344 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 12:20:06] 2025-10-17 10:20:06,347 [wrapper] pilotpid: 979486
[2025-10-17 12:20:06] 2025-10-17 10:20:06,351 [wrapper] Pilot exit status: 0
[2025-10-17 12:20:06] 2025-10-17 10:20:06,463 [wrapper] pandaids: 6846998122
[2025-10-17 12:20:06] 2025-10-17 10:20:06,525 [wrapper] cleanup supervisor_pilot 1030942 979487
[2025-10-17 12:20:06] 2025-10-17 10:20:06,529 [wrapper] Test setup, not cleaning
[2025-10-17 12:20:06] 2025-10-17 10:20:06,533 [wrapper] apfmon messages muted
[2025-10-17 12:20:06] 2025-10-17 10:20:06,536 [wrapper] ==== wrapper stdout END ====
[2025-10-17 12:20:06] 2025-10-17 10:20:06,540 [wrapper] ==== wrapper stderr END ====
[2025-10-17 12:20:06]  *** Error codes and diagnostics ***
[2025-10-17 12:20:06]     "exeErrorCode": 0,
[2025-10-17 12:20:06]     "exeErrorDiag": "",
[2025-10-17 12:20:06]     "pilotErrorCode": 0,
[2025-10-17 12:20:06]     "pilotErrorDiag": "",
[2025-10-17 12:20:06]  *** Listing of results directory ***
[2025-10-17 12:20:06] total 431308
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc    563267 Oct  7 09:02 pilot3.tar.gz
[2025-10-17 12:20:06] -rwx------ 1 boinc boinc     36292 Oct 16 08:57 runpilot2-wrapper.sh
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc      5112 Oct 16 08:57 queuedata.json
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc       100 Oct 17 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 12:20:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 17 10:30 run_atlas
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc       105 Oct 17 10:30 job.xml
[2025-10-17 12:20:06] -rw-r--r-- 2 boinc boinc 230052977 Oct 17 10:30 EVNT.46776529._000495.pool.root.1
[2025-10-17 12:20:06] -rw-r--r-- 2 boinc boinc    576706 Oct 17 10:30 input.tar.gz
[2025-10-17 12:20:06] -rw-r--r-- 2 boinc boinc     15120 Oct 17 10:30 start_atlas.sh
[2025-10-17 12:20:06] drwxrwx--x 2 boinc boinc      4096 Oct 17 10:30 shared
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc         0 Oct 17 10:30 boinc_setup_complete
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc      6197 Oct 17 10:30 init_data.xml
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc         0 Oct 17 10:30 boinc_lockfile
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc      2560 Oct 17 10:30 pandaJob.out
[2025-10-17 12:20:06] -rw------- 1 boinc boinc    976718 Oct 17 10:30 agis_schedconf.cvmfs.json
[2025-10-17 12:20:06] -rw------- 1 boinc boinc   1560740 Oct 17 10:30 agis_ddmendpoints.agis.ALL.json
[2025-10-17 12:20:06] drwx------ 4 boinc boinc      4096 Oct 17 10:30 pilot3
[2025-10-17 12:20:06] -rw------- 1 boinc boinc 205255640 Oct 17 12:18 HITS.46776533._012623.pool.root.1
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc       529 Oct 17 12:19 boinc_task_state.xml
[2025-10-17 12:20:06] -rw------- 1 boinc boinc      1056 Oct 17 12:19 memory_monitor_summary.json
[2025-10-17 12:20:06] -rw------- 1 boinc boinc    288935 Oct 17 12:19 log.46776533._012623.job.log.tgz.1
[2025-10-17 12:20:06] -rw------- 1 boinc boinc        95 Oct 17 12:19 pilot_heartbeat.json
[2025-10-17 12:20:06] -rw------- 1 boinc boinc      7821 Oct 17 12:19 heartbeat.json
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc      8192 Oct 17 12:19 boinc_mmap_file
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc        27 Oct 17 12:19 wrapper_checkpoint.txt
[2025-10-17 12:20:06] -rw------- 1 boinc boinc      4823 Oct 17 12:20 pilotlog.txt
[2025-10-17 12:20:06] -rw------- 1 boinc boinc    936918 Oct 17 12:20 log.46776533._012623.job.log.1
[2025-10-17 12:20:06] -rw------- 1 boinc boinc       357 Oct 17 12:20 output.list
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc       620 Oct 17 12:20 runtime_log
[2025-10-17 12:20:06] -rw------- 1 boinc boinc   1249280 Oct 17 12:20 result.tar.gz
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc      8797 Oct 17 12:20 runtime_log.err
[2025-10-17 12:20:06] -rw------- 1 boinc boinc       669 Oct 17 12:20 ooNNDmL6WT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN7pNDm81xHYo.diag
[2025-10-17 12:20:06] -rw-r--r-- 1 boinc boinc      7843 Oct 17 12:20 stderr.txt
[2025-10-17 12:20:06] HITS file was successfully produced:
[2025-10-17 12:20:06] -rw------- 1 boinc boinc 205255640 Oct 17 12:18 shared/HITS.pool.root.1
[2025-10-17 12:20:06]  *** Contents of shared directory: ***
[2025-10-17 12:20:06] total 426916
[2025-10-17 12:20:06] -rw-r--r-- 2 boinc boinc 230052977 Oct 17 10:30 ATLAS.root_0
[2025-10-17 12:20:06] -rw-r--r-- 2 boinc boinc    576706 Oct 17 10:30 input.tar.gz
[2025-10-17 12:20:06] -rw-r--r-- 2 boinc boinc     15120 Oct 17 10:30 start_atlas.sh
[2025-10-17 12:20:06] -rw------- 1 boinc boinc 205255640 Oct 17 12:18 HITS.pool.root.1
[2025-10-17 12:20:06] -rw------- 1 boinc boinc   1249280 Oct 17 12:20 result.tar.gz
12:20:08 (975755): run_atlas exited; CPU time 18767.264549
12:20:08 (975755): called boinc_finish(0)

</stderr_txt>
]]>

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