Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:00:35 (1096915): wrapper (7.7.26015): starting
13:00:35 (1096915): wrapper: running run_atlas (--nthreads 12)
[2025-10-16 13:00:35] Arguments: --nthreads 12
[2025-10-16 13:00:35] Threads: 12
[2025-10-16 13:00:35] Checking for CVMFS
[2025-10-16 13:00:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 13:00:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 13:00:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 13:00:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 13:00:40] 2.11.5.0 2127 36132 222768 151790 0 568 34359636 45568001 24134 130560 0 299117161 99.871 118609608 23136 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-16 13:00:40] CVMFS is ok
[2025-10-16 13:00:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 13:00:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 13:00:40] Further information can be found at the LHC@home message board.
[2025-10-16 13:00:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 13:00:40] Checking for apptainer binary...
[2025-10-16 13:00:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 13:00:40] Running /usr/bin/apptainer --version
[2025-10-16 13:00:40] apptainer version 1.4.1-1.el9
[2025-10-16 13:00:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 13:00:41] wns0041.triumf.lcg
[2025-10-16 13:00:41] apptainer works
[2025-10-16 13:00:41] Set ATHENA_PROC_NUMBER=12
[2025-10-16 13:00:41] Set ATHENA_CORE_NUMBER=12
[2025-10-16 13:00:41] Starting ATLAS job with PandaID=6847323452
[2025-10-16 13:00:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 13:09:42]  *** The last 200 lines of the pilot log: ***
[2025-10-16 13:09:42] 2025-10-16 20:08:29,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 13:09:42] 2025-10-16 20:08:29,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 13:09:42] 2025-10-16 20:08:29,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 13:09:42] 2025-10-16 20:08:29,065 | WARNING  | wrong length of table data, x=[1760645065.0, 1760645126.0], y=[2558.0, 614634.0] (must be same and length>=4)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | could have reported an average CPU frequency of 1389 MHz (4 samples)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | ..............................
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . Timing measurements:
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . get job = 0 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . initial setup = 4 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . payload setup = 43 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . stage-in = 0 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . payload execution = 119 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | . stage-out = 2 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | . log creation = 0 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | ..............................
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6847323452/pilotlog.txt
[2025-10-16 13:09:42] 2025-10-16 20:08:29,134 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-16 13:09:42] - Log from pilotlog.txt -
[2025-10-16 13:09:42] 2025-10-16 20:08:29,056 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6847323452/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,057 | INFO     | extracted standard info from prmon json
[2025-10-16 13:09:42] 2025-10-16 20:08:29,057 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 13:09:42] 2025-10-16 20:08:29,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 13:09:42] 2025-10-16 20:08:29,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 13:09:42] 2025-10-16 20:08:29,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 13:09:42] 2025-10-16 20:08:29,065 | WARNING  | wrong length of table data, x=[1760645065.0, 1760645126.0], y=[2558.0, 614634.0] (must be same and length>=4)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | could have reported an average CPU frequency of 1389 MHz (4 samples)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | ..............................
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . Timing measurements:
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . get job = 0 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . initial setup = 4 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . payload setup = 43 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . stage-in = 0 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . payload execution = 119 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | . stage-out = 2 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | . log creation = 0 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | ..............................
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6847323452/pilotlog.txt
[2025-10-16 13:09:42] 2025-10-16 20:08:29,136 | WARNING  | 
[2025-10-16 13:09:42] [begin log extracts]
[2025-10-16 13:09:42] - Log from pilotlog.txt -
[2025-10-16 13:09:42] 2025-10-16 20:08:29,056 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6847323452/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,057 | INFO     | extracted standard info from prmon json
[2025-10-16 13:09:42] 2025-10-16 20:08:29,057 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 13:09:42] 2025-10-16 20:08:29,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 13:09:42] 2025-10-16 20:08:29,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 13:09:42] 2025-10-16 20:08:29,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 13:09:42] 2025-10-16 20:08:29,065 | WARNING  | wrong length of table data, x=[1760645065.0, 1760645126.0], y=[2558.0, 614634.0] (must be same and length>=4)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | could have reported an average CPU frequency of 1389 MHz (4 samples)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | ..............................
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . Timing measurements:
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . get job = 0 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . initial setup = 4 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . payload setup = 43 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . stage-in = 0 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,066 | INFO     | . payload execution = 119 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | . stage-out = 2 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | . log creation = 0 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | ..............................
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-16 13:09:42] 2025-10-16 20:08:29,067 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6847323452/pilotlog.txt
[2025-10-16 13:09:42] [end log extracts]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,138 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,144 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-16 13:09:42] 2025-10-16 20:08:29,264 | INFO     | 
[2025-10-16 13:09:42] 2025-10-16 20:08:29,264 | INFO     | job summary report
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | --------------------------------------------------
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | PanDA job id: 6847323452
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | task id: 46771637
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-16 13:05:29,215 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | pilot state: failed 
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | transexitcode: 65
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | exeerrorcode: 65
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | exitcode: 65
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,265 | INFO     | cpuconsumptiontime: 33 s
[2025-10-16 13:09:42] 2025-10-16 20:08:29,266 | INFO     | nevents: 0
[2025-10-16 13:09:42] 2025-10-16 20:08:29,266 | INFO     | neventsw: 0
[2025-10-16 13:09:42] 2025-10-16 20:08:29,266 | INFO     | pid: 1138697
[2025-10-16 13:09:42] 2025-10-16 20:08:29,266 | INFO     | pgrp: 1138697
[2025-10-16 13:09:42] 2025-10-16 20:08:29,266 | INFO     | corecount: 12
[2025-10-16 13:09:42] 2025-10-16 20:08:29,266 | INFO     | event service: False
[2025-10-16 13:09:42] 2025-10-16 20:08:29,266 | INFO     | sizes: {0: 2348092, 1: 2348774, 2: 2348973, 3: 2348973, 14: 2349001, 25: 2349029, 37: 2349475, 48: 2349475, 167: 2372761, 170: 2377053, 171: 2377081, 334: 2377555}
[2025-10-16 13:09:42] 2025-10-16 20:08:29,266 | INFO     | --------------------------------------------------
[2025-10-16 13:09:42] 2025-10-16 20:08:29,266 | INFO     | 
[2025-10-16 13:09:42] 2025-10-16 20:08:29,266 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-16 13:09:42] 2025-10-16 20:08:29,504 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,504 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,504 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,504 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,505 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 13:09:42] 2025-10-16 20:08:29,506 | INFO     | job 6847323452 has completed (purged errors)
[2025-10-16 13:09:42] 2025-10-16 20:08:29,506 | INFO     | overall cleanup function is called
[2025-10-16 13:09:42] 2025-10-16 20:08:30,540 | INFO     | --- collectZombieJob: --- 10, [1138697]
[2025-10-16 13:09:42] 2025-10-16 20:08:30,540 | INFO     | zombie collector waiting for pid 1138697
[2025-10-16 13:09:42] 2025-10-16 20:08:30,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 13:09:42] 2025-10-16 20:08:30,540 | INFO     | collected zombie processes
[2025-10-16 13:09:42] 2025-10-16 20:08:30,540 | INFO     | will attempt to kill all subprocesses of pid=1138697
[2025-10-16 13:09:42] 2025-10-16 20:08:32,206 | INFO     | process IDs to be killed: [1138697] (in reverse order)
[2025-10-16 13:09:42] 2025-10-16 20:08:32,730 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 13:09:42] 2025-10-16 20:08:32,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 13:09:42] 2025-10-16 20:08:32,798 | INFO     | did not find any defunct processes belonging to 1138697
[2025-10-16 13:09:42] 2025-10-16 20:08:32,869 | INFO     | did not find any defunct processes belonging to 1138697
[2025-10-16 13:09:42] 2025-10-16 20:08:32,869 | INFO     | ready for new job
[2025-10-16 13:09:42] 2025-10-16 20:08:32,869 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 13:09:42] 2025-10-16 20:08:32,881 | INFO     | ***************************************
[2025-10-16 13:09:42] 2025-10-16 20:08:32,881 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 13:09:42] 2025-10-16 20:08:32,881 | INFO     | ***************************************
[2025-10-16 13:09:42] 2025-10-16 20:08:32,881 | INFO     | 
[2025-10-16 13:09:42] 2025-10-16 20:08:32,885 | INFO     | architecture information:
[2025-10-16 13:09:42] 2025-10-16 20:08:32,885 | INFO     | executing command: cat /etc/os-release
[2025-10-16 13:09:42] 2025-10-16 20:08:32,945 | INFO     | cat /etc/os-release:
[2025-10-16 13:09:42] NAME="CentOS Linux"
[2025-10-16 13:09:42] VERSION="7 (Core)"
[2025-10-16 13:09:42] ID="centos"
[2025-10-16 13:09:42] ID_LIKE="rhel fedora"
[2025-10-16 13:09:42] VERSION_ID="7"
[2025-10-16 13:09:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 13:09:42] ANSI_COLOR="0;31"
[2025-10-16 13:09:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 13:09:42] HOME_URL="https://www.centos.org/"
[2025-10-16 13:09:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 13:09:42] 
[2025-10-16 13:09:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 13:09:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 13:09:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 13:09:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 13:09:42] 
[2025-10-16 13:09:42] 2025-10-16 20:08:32,946 | INFO     | ***************************************
[2025-10-16 13:09:42] 2025-10-16 20:08:33,449 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-16 13:09:42] 2025-10-16 20:08:33,489 | INFO     | sufficient remaining disk space (1865912680448 B)
[2025-10-16 13:09:42] 2025-10-16 20:08:33,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 13:09:42] 2025-10-16 20:08:33,492 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 13:09:42] 2025-10-16 20:08:33,492 | INFO     | update_server=False
[2025-10-16 13:09:42] 2025-10-16 20:08:33,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 13:09:42] 2025-10-16 20:08:33,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 13:09:42] 2025-10-16 20:08:33,501 | INFO     | aborting loop
[2025-10-16 13:09:42] 2025-10-16 20:08:33,706 | INFO     | all job control threads have been joined
[2025-10-16 13:09:42] 2025-10-16 20:08:33,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 13:09:42] 2025-10-16 20:08:34,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 13:09:42] 2025-10-16 20:08:34,415 | INFO     | all data control threads have been joined
[2025-10-16 13:09:42] 2025-10-16 20:08:34,498 | INFO     | [job] retrieve thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:34,507 | INFO     | [job] job monitor thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:34,712 | INFO     | [job] control thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:34,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 13:09:42] 2025-10-16 20:08:34,927 | INFO     | all payload control threads have been joined
[2025-10-16 13:09:42] 2025-10-16 20:08:34,943 | INFO     | [payload] failed_post thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,327 | INFO     | [job] queue monitor thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,421 | INFO     | [data] control thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,442 | INFO     | [data] copytool_in thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,451 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,585 | INFO     | [job] validate thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,586 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,609 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,688 | INFO     | [payload] validate_post thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,862 | INFO     | [data] copytool_out thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:35,934 | INFO     | [payload] control thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:08:38,924 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 13:09:42] 2025-10-16 20:09:01,820 | INFO     | PID=1117163 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-16 13:09:42] 2025-10-16 20:09:01,820 | INFO     | .. there are 42 such processes running
[2025-10-16 13:09:42] 2025-10-16 20:09:01,821 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 13:09:42] 2025-10-16 20:09:01,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 13:09:42] 2025-10-16 20:09:01,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 13:09:42] 2025-10-16 20:09:33,570 | INFO     | [monitor] cgroup control has ended
[2025-10-16 13:09:42] 2025-10-16 20:09:35,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847699900224)>', '<ExcThread(monitor, started 139847379425024)>']
[2025-10-16 13:09:42] 2025-10-16 20:09:36,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 13:09:42] 2025-10-16 20:09:36,058 | INFO     | [monitor] control thread has ended
[2025-10-16 13:09:42] 2025-10-16 20:09:40,547 | INFO     | all workflow threads have been joined
[2025-10-16 13:09:42] 2025-10-16 20:09:40,547 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 13:09:42] 2025-10-16 20:09:40,548 | INFO     | traces error code: 0
[2025-10-16 13:09:42] 2025-10-16 20:09:40,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 13:09:42] 2025-10-16 20:09:41,280 [wrapper] ==== pilot stdout END ====
[2025-10-16 13:09:42] 2025-10-16 20:09:41,313 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 13:09:42] 2025-10-16 20:09:41,329 [wrapper] pilotpid: 1117163
[2025-10-16 13:09:42] 2025-10-16 20:09:41,353 [wrapper] Pilot exit status: 0
[2025-10-16 13:09:42] 2025-10-16 20:09:41,495 [wrapper] pandaids: 6847323452
[2025-10-16 13:09:42] 2025-10-16 20:09:42,070 [wrapper] cleanup supervisor_pilot 1117198 1117164
[2025-10-16 13:09:42] 2025-10-16 20:09:42,075 [wrapper] Test setup, not cleaning
[2025-10-16 13:09:42] 2025-10-16 20:09:42,078 [wrapper] apfmon messages muted
[2025-10-16 13:09:42] 2025-10-16 20:09:42,082 [wrapper] ==== wrapper stdout END ====
[2025-10-16 13:09:42] 2025-10-16 20:09:42,085 [wrapper] ==== wrapper stderr END ====
[2025-10-16 13:09:42]  *** Error codes and diagnostics ***
[2025-10-16 13:09:42]     "exeErrorCode": 65,
[2025-10-16 13:09:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-16 13:09:42]     "pilotErrorCode": 1305,
[2025-10-16 13:09:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-16 13:09:42]  *** Listing of results directory ***
[2025-10-16 13:09:42] total 228640
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc    557409 Oct 16 09:32 pilot3.tar.gz
[2025-10-16 13:09:42] -rwx------. 1 boinc boinc     36292 Oct 16 10:16 runpilot2-wrapper.sh
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc      5112 Oct 16 10:16 queuedata.json
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc       100 Oct 16 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 13:09:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct 16 13:00 run_atlas
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc       105 Oct 16 13:00 job.xml
[2025-10-16 13:09:42] -rw-r--r--. 2 boinc boinc 229955945 Oct 16 13:00 EVNT.46771634._000507.pool.root.1
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc      6594 Oct 16 13:00 init_data.xml
[2025-10-16 13:09:42] -rw-r--r--. 2 boinc boinc     15120 Oct 16 13:00 start_atlas.sh
[2025-10-16 13:09:42] drwxrwx--x. 2 boinc boinc      4096 Oct 16 13:00 shared
[2025-10-16 13:09:42] -rw-r--r--. 2 boinc boinc    569677 Oct 16 13:00 input.tar.gz
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc         0 Oct 16 13:00 boinc_lockfile
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc      2553 Oct 16 13:00 pandaJob.out
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc    976761 Oct 16 13:01 agis_schedconf.cvmfs.json
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc   1560740 Oct 16 13:01 agis_ddmendpoints.agis.ALL.json
[2025-10-16 13:09:42] drwx------. 5 boinc boinc      4096 Oct 16 13:01 pilot3
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc       525 Oct 16 13:05 boinc_task_state.xml
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc      1010 Oct 16 13:05 memory_monitor_summary.json
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc     22761 Oct 16 13:05 log.46771637._014939.job.log.tgz.1
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc      8407 Oct 16 13:08 heartbeat.json
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc        95 Oct 16 13:09 pilot_heartbeat.json
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc      4823 Oct 16 13:09 pilotlog.txt
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc      8192 Oct 16 13:09 boinc_mmap_file
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc        23 Oct 16 13:09 wrapper_checkpoint.txt
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc    106505 Oct 16 13:09 log.46771637._014939.job.log.1
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc       188 Oct 16 13:09 output.list
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc       620 Oct 16 13:09 runtime_log
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc    153600 Oct 16 13:09 result.tar.gz
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc      8528 Oct 16 13:09 runtime_log.err
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc       645 Oct 16 13:09 OYcMDm5lgT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTFrNDmlxzZQo.diag
[2025-10-16 13:09:42] -rw-r--r--. 1 boinc boinc     21918 Oct 16 13:09 stderr.txt
[2025-10-16 13:09:42] No HITS result produced
[2025-10-16 13:09:42]  *** Contents of shared directory: ***
[2025-10-16 13:09:42] total 225300
[2025-10-16 13:09:42] -rw-r--r--. 2 boinc boinc 229955945 Oct 16 13:00 ATLAS.root_0
[2025-10-16 13:09:42] -rw-r--r--. 2 boinc boinc     15120 Oct 16 13:00 start_atlas.sh
[2025-10-16 13:09:42] -rw-r--r--. 2 boinc boinc    569677 Oct 16 13:00 input.tar.gz
[2025-10-16 13:09:42] -rw-------. 1 boinc boinc    153600 Oct 16 13:09 result.tar.gz
13:09:44 (1096915): run_atlas exited; CPU time 49.844388
13:09:44 (1096915): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN