Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
14:09:29 (111725): wrapper (7.7.26015): starting
14:09:29 (111725): wrapper: running run_atlas (--nthreads 5)
[2025-10-16 14:09:29] Arguments: --nthreads 5
[2025-10-16 14:09:29] Threads: 5
[2025-10-16 14:09:29] Checking for CVMFS
[2025-10-16 14:09:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 14:10:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 14:10:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 14:10:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 14:10:10] 2.13.1.0 111860 0 31660 151789 3 1 2727656 6144000 0 130560 0 0 100.000 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-16 14:10:10] CVMFS is ok
[2025-10-16 14:10:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 14:10:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-16 14:10:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-16 14:10:10] Further information can be found at the LHC@home message board.
[2025-10-16 14:10:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 14:10:10] Checking for apptainer binary...
[2025-10-16 14:10:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 14:10:10] Running /usr/bin/apptainer --version
[2025-10-16 14:10:10] apptainer version 1.4.2
[2025-10-16 14:10:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 14:10:10] riotskates
[2025-10-16 14:10:10] apptainer works
[2025-10-16 14:10:10] Set ATHENA_PROC_NUMBER=5
[2025-10-16 14:10:10] Set ATHENA_CORE_NUMBER=5
[2025-10-16 14:10:11] Starting ATLAS job with PandaID=6847307803
[2025-10-16 14:10:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 15:21:18]  *** The last 200 lines of the pilot log: ***
[2025-10-16 15:21:18] 2025-10-16 20:20:26,671 | INFO     | this job has now completed (state=finished)
[2025-10-16 15:21:18] 2025-10-16 20:20:26,671 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-16 15:21:18] 2025-10-16 20:20:26,671 | INFO     | log transfer has been attempted: DONE
[2025-10-16 15:21:18] 2025-10-16 20:20:26,671 | INFO     | job 6847307803 has finished - writing final server update
[2025-10-16 15:21:18] 2025-10-16 20:20:26,672 | INFO     | total number of processed events: 400 (read)
[2025-10-16 15:21:18] 2025-10-16 20:20:26,675 | INFO     | executing command: lscpu
[2025-10-16 15:21:18] 2025-10-16 20:20:26,715 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-16 15:21:18] 2025-10-16 20:20:26,987 | INFO     | time since job start (4111s) is within the limit (172800.0s)
[2025-10-16 15:21:18] 2025-10-16 20:20:27,638 | INFO     | monitor loop #303: job 0:6847307803 is in state 'finished'
[2025-10-16 15:21:18] 2025-10-16 20:20:27,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 15:21:18] 2025-10-16 20:20:28,992 | INFO     | time since job start (4113s) is within the limit (172800.0s)
[2025-10-16 15:21:18] 2025-10-16 20:20:30,142 | INFO     | monitor loop #304: job 0:6847307803 is in state 'finished'
[2025-10-16 15:21:18] 2025-10-16 20:20:30,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 15:21:18] 2025-10-16 20:20:30,995 | INFO     | time since job start (4115s) is within the limit (172800.0s)
[2025-10-16 15:21:18] 2025-10-16 20:20:32,092 | INFO     | PID=115992 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-16 15:21:18] 2025-10-16 20:20:32,644 | INFO     | monitor loop #305: job 0:6847307803 is in state 'finished'
[2025-10-16 15:21:18] 2025-10-16 20:20:32,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 15:21:18] 2025-10-16 20:20:33,093 | INFO     | time since job start (4118s) is within the limit (172800.0s)
[2025-10-16 15:21:18] 2025-10-16 20:20:35,098 | INFO     | time since job start (4120s) is within the limit (172800.0s)
[2025-10-16 15:21:18] 2025-10-16 20:20:35,147 | INFO     | monitor loop #306: job 0:6847307803 is in state 'finished'
[2025-10-16 15:21:18] 2025-10-16 20:20:35,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 15:21:18] 2025-10-16 20:20:37,104 | INFO     | time since job start (4122s) is within the limit (172800.0s)
[2025-10-16 15:21:18] 2025-10-16 20:20:37,650 | INFO     | monitor loop #307: job 0:6847307803 is in state 'finished'
[2025-10-16 15:21:18] 2025-10-16 20:20:37,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 15:21:18] 2025-10-16 20:20:39,110 | INFO     | time since job start (4124s) is within the limit (172800.0s)
[2025-10-16 15:21:18] 2025-10-16 20:20:40,152 | INFO     | monitor loop #308: job 0:6847307803 is in state 'finished'
[2025-10-16 15:21:18] 2025-10-16 20:20:40,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 15:21:18] 2025-10-16 20:20:41,113 | INFO     | time since job start (4126s) is within the limit (172800.0s)
[2025-10-16 15:21:18] 2025-10-16 20:20:42,655 | INFO     | monitor loop #309: job 0:6847307803 is in state 'finished'
[2025-10-16 15:21:18] 2025-10-16 20:20:42,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 15:21:18] 2025-10-16 20:20:43,119 | INFO     | time since job start (4128s) is within the limit (172800.0s)
[2025-10-16 15:21:18] 2025-10-16 20:20:45,124 | INFO     | time since job start (4130s) is within the limit (172800.0s)
[2025-10-16 15:21:18] 2025-10-16 20:20:45,159 | INFO     | monitor loop #310: job 0:6847307803 is in state 'finished'
[2025-10-16 15:21:18] 2025-10-16 20:20:45,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 15:21:18] 2025-10-16 20:20:45,847 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-16 15:21:18] 2025-10-16 20:20:45,848 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 2251.3225833333336
[2025-10-16 15:21:18] 2025-10-16 20:20:45,849 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6847307803/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 15:21:18] 2025-10-16 20:20:45,849 | INFO     | extracted standard info from prmon json
[2025-10-16 15:21:18] 2025-10-16 20:20:45,849 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 15:21:18] 2025-10-16 20:20:45,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 15:21:18] 2025-10-16 20:20:45,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 15:21:18] 2025-10-16 20:20:45,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 15:21:18] 2025-10-16 20:20:45,850 | INFO     | fitting pss+swap vs Time
[2025-10-16 15:21:18] 2025-10-16 20:20:45,850 | INFO     | sum of square deviations: 66959395.0
[2025-10-16 15:21:18] 2025-10-16 20:20:45,850 | INFO     | sum of deviations: -610171715.0
[2025-10-16 15:21:18] 2025-10-16 20:20:45,850 | INFO     | mean x: 1760644048.5
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | mean y: 2545081.7
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | -- intersect: 16046525147.197727
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | intersect: 16046525147.197727
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | chi2: 0.013588898686683063
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | -- intersect: 16046525147.197727
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | current memory leak: -9.11 B/s (using 60 data points, chi2=0.01)
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | could have reported an average CPU frequency of 2581 MHz (6 samples)
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | ..............................
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | . Timing measurements:
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | . get job = 0 s
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | . initial setup = 8 s
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | . payload setup = 7 s
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | . stage-in = 0 s
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | . payload execution = 4076 s
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | . stage-out = 0 s
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | . log creation = 0 s
[2025-10-16 15:21:18] 2025-10-16 20:20:45,851 | INFO     | ..............................
[2025-10-16 15:21:18] 2025-10-16 20:20:45,892 | INFO     | 
[2025-10-16 15:21:18] 2025-10-16 20:20:45,892 | INFO     | job summary report
[2025-10-16 15:21:18] 2025-10-16 20:20:45,892 | INFO     | --------------------------------------------------
[2025-10-16 15:21:18] 2025-10-16 20:20:45,892 | INFO     | PanDA job id: 6847307803
[2025-10-16 15:21:18] 2025-10-16 20:20:45,892 | INFO     | task id: 46771637
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | errors: (none)
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | pilot state: finished 
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | transexitcode: 0
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | exeerrorcode: 0
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | exeerrordiag: 
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | exitcode: 0
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | exitmsg: OK
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | cpuconsumptiontime: 19484 s
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | nevents: 400
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | neventsw: 0
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | pid: 122421
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | pgrp: 122421
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | corecount: 5
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | event service: False
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | sizes: {0: 2348779, 1: 2348978, 6: 2349240, 11: 2349268, 4088: 2375239, 4089: 2384237, 4092: 2384421, 4114: 2384615}
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | --------------------------------------------------
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | 
[2025-10-16 15:21:18] 2025-10-16 20:20:45,893 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-16 15:21:18] 2025-10-16 20:20:45,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,907 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,907 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,907 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,907 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,907 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,908 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 15:21:18] 2025-10-16 20:20:45,909 | INFO     | job 6847307803 has completed (purged errors)
[2025-10-16 15:21:18] 2025-10-16 20:20:45,909 | INFO     | overall cleanup function is called
[2025-10-16 15:21:18] 2025-10-16 20:20:46,917 | INFO     | --- collectZombieJob: --- 10, [122421]
[2025-10-16 15:21:18] 2025-10-16 20:20:46,917 | INFO     | zombie collector waiting for pid 122421
[2025-10-16 15:21:18] 2025-10-16 20:20:46,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 15:21:18] 2025-10-16 20:20:46,917 | INFO     | collected zombie processes
[2025-10-16 15:21:18] 2025-10-16 20:20:46,917 | INFO     | will attempt to kill all subprocesses of pid=122421
[2025-10-16 15:21:18] 2025-10-16 20:20:46,994 | INFO     | process IDs to be killed: [122421] (in reverse order)
[2025-10-16 15:21:18] 2025-10-16 20:20:47,057 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 15:21:18] 2025-10-16 20:20:47,057 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 15:21:18] 2025-10-16 20:20:47,059 | INFO     | did not find any defunct processes belonging to 122421
[2025-10-16 15:21:18] 2025-10-16 20:20:47,060 | INFO     | did not find any defunct processes belonging to 122421
[2025-10-16 15:21:18] 2025-10-16 20:20:47,060 | INFO     | ready for new job
[2025-10-16 15:21:18] 2025-10-16 20:20:47,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 15:21:18] 2025-10-16 20:20:47,061 | INFO     | ***************************************
[2025-10-16 15:21:18] 2025-10-16 20:20:47,061 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 15:21:18] 2025-10-16 20:20:47,061 | INFO     | ***************************************
[2025-10-16 15:21:18] 2025-10-16 20:20:47,061 | INFO     | 
[2025-10-16 15:21:18] 2025-10-16 20:20:47,062 | INFO     | architecture information:
[2025-10-16 15:21:18] 2025-10-16 20:20:47,062 | INFO     | executing command: cat /etc/os-release
[2025-10-16 15:21:18] 2025-10-16 20:20:47,077 | INFO     | cat /etc/os-release:
[2025-10-16 15:21:18] NAME="CentOS Linux"
[2025-10-16 15:21:18] VERSION="7 (Core)"
[2025-10-16 15:21:18] ID="centos"
[2025-10-16 15:21:18] ID_LIKE="rhel fedora"
[2025-10-16 15:21:18] VERSION_ID="7"
[2025-10-16 15:21:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 15:21:18] ANSI_COLOR="0;31"
[2025-10-16 15:21:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 15:21:18] HOME_URL="https://www.centos.org/"
[2025-10-16 15:21:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 15:21:18] 
[2025-10-16 15:21:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 15:21:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 15:21:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 15:21:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 15:21:18] 
[2025-10-16 15:21:18] 2025-10-16 20:20:47,078 | INFO     | ***************************************
[2025-10-16 15:21:18] 2025-10-16 20:20:47,581 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-16 15:21:18] 2025-10-16 20:20:47,599 | INFO     | sufficient remaining disk space (509519855616 B)
[2025-10-16 15:21:18] 2025-10-16 20:20:47,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 15:21:18] 2025-10-16 20:20:47,600 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 15:21:18] 2025-10-16 20:20:47,600 | INFO     | update_server=False
[2025-10-16 15:21:18] 2025-10-16 20:20:47,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 15:21:18] 2025-10-16 20:20:47,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 15:21:18] 2025-10-16 20:20:47,663 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-16 15:21:18] 2025-10-16 20:20:47,663 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-16 15:21:18] 2025-10-16 20:20:47,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 15:21:18] 2025-10-16 20:20:47,663 | INFO     | will abort loop
[2025-10-16 15:21:18] 2025-10-16 20:20:47,757 | INFO     | all payload control threads have been joined
[2025-10-16 15:21:18] 2025-10-16 20:20:47,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 15:21:18] 2025-10-16 20:20:48,138 | INFO     | all data control threads have been joined
[2025-10-16 15:21:18] 2025-10-16 20:20:48,606 | INFO     | [job] retrieve thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:48,607 | INFO     | [job] queue monitor thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:48,669 | INFO     | [job] job monitor thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:48,762 | INFO     | [payload] control thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:48,788 | INFO     | all job control threads have been joined
[2025-10-16 15:21:18] 2025-10-16 20:20:48,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 15:21:18] 2025-10-16 20:20:49,143 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:49,144 | INFO     | [data] control thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:49,426 | INFO     | [job] validate thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:49,529 | INFO     | [payload] validate_post thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:49,667 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:49,688 | INFO     | [data] copytool_in thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:49,778 | INFO     | [payload] failed_post thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:49,794 | INFO     | [job] control thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:49,861 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:50,970 | INFO     | [data] copytool_out thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:51,798 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:20:57,920 | INFO     | job.realtimelogging is not enabled
[2025-10-16 15:21:18] 2025-10-16 20:20:58,925 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 15:21:18] 2025-10-16 20:21:00,040 | INFO     | [monitor] cgroup control has ended
[2025-10-16 15:21:18] 2025-10-16 20:21:00,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140439516067648)>', '<ExcThread(monitor, started 140439021664000)>']
[2025-10-16 15:21:18] 2025-10-16 20:21:05,977 | INFO     | all workflow threads have been joined
[2025-10-16 15:21:18] 2025-10-16 20:21:05,978 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 15:21:18] 2025-10-16 20:21:05,978 | INFO     | traces error code: 0
[2025-10-16 15:21:18] 2025-10-16 20:21:05,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 15:21:18] 2025-10-16 20:21:18,272 | INFO     | PID=115992 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-16 15:21:18] 2025-10-16 20:21:18,272 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 15:21:18] 2025-10-16 20:21:18,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 15:21:18] 2025-10-16 20:21:18,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 15:21:18] 2025-10-16 20:21:18,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 15:21:18] 2025-10-16 20:21:18,272 | INFO     | [monitor] control thread has ended
[2025-10-16 15:21:18] 2025-10-16 20:21:18,364 [wrapper] ==== pilot stdout END ====
[2025-10-16 15:21:18] 2025-10-16 20:21:18,369 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 15:21:18] 2025-10-16 20:21:18,373 [wrapper] pilotpid: 115992
[2025-10-16 15:21:18] 2025-10-16 20:21:18,377 [wrapper] Pilot exit status: 0
[2025-10-16 15:21:18] 2025-10-16 20:21:18,394 [wrapper] pandaids: 6847307803
[2025-10-16 15:21:18] 2025-10-16 20:21:18,442 [wrapper] cleanup supervisor_pilot  132406 115993
[2025-10-16 15:21:18] 2025-10-16 20:21:18,447 [wrapper] Test setup, not cleaning
[2025-10-16 15:21:18] 2025-10-16 20:21:18,452 [wrapper] apfmon messages muted
[2025-10-16 15:21:18] 2025-10-16 20:21:18,457 [wrapper] ==== wrapper stdout END ====
[2025-10-16 15:21:18] 2025-10-16 20:21:18,461 [wrapper] ==== wrapper stderr END ====
[2025-10-16 15:21:18]  *** Error codes and diagnostics ***
[2025-10-16 15:21:18]     "exeErrorCode": 0,
[2025-10-16 15:21:18]     "exeErrorDiag": "",
[2025-10-16 15:21:18]     "pilotErrorCode": 0,
[2025-10-16 15:21:18]     "pilotErrorDiag": "",
[2025-10-16 15:21:18]  *** Listing of results directory ***
[2025-10-16 15:21:18] total 433460
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc    557409 Oct 16 05:43 pilot3.tar.gz
[2025-10-16 15:21:18] -rwx------ 1 boinc boinc     36292 Oct 16 06:15 runpilot2-wrapper.sh
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc      5112 Oct 16 06:15 queuedata.json
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc       100 Oct 16 14:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 15:21:18] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 14:09 run_atlas
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc       105 Oct 16 14:09 job.xml
[2025-10-16 15:21:18] -rw-r--r-- 2 boinc boinc     15120 Oct 16 14:09 start_atlas.sh
[2025-10-16 15:21:18] drwxrwx--x 2 boinc boinc        68 Oct 16 14:09 shared
[2025-10-16 15:21:18] -rw-r--r-- 2 boinc boinc    569678 Oct 16 14:09 input.tar.gz
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc      6350 Oct 16 14:09 init_data.xml
[2025-10-16 15:21:18] -rw-r--r-- 2 boinc boinc 229239661 Oct 16 14:09 EVNT.46771634._000379.pool.root.1
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc         0 Oct 16 14:09 boinc_setup_complete
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc         0 Oct 16 14:09 boinc_lockfile
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc      2555 Oct 16 14:10 pandaJob.out
[2025-10-16 15:21:18] -rw------- 1 boinc boinc    976769 Oct 16 14:11 agis_schedconf.cvmfs.json
[2025-10-16 15:21:18] -rw------- 1 boinc boinc   1560740 Oct 16 14:11 agis_ddmendpoints.agis.ALL.json
[2025-10-16 15:21:18] drwx------ 5 boinc boinc      4096 Oct 16 14:11 pilot3
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc       529 Oct 16 15:19 boinc_task_state.xml
[2025-10-16 15:21:18] -rw------- 1 boinc boinc 209017547 Oct 16 15:19 HITS.46771637._008839.pool.root.1
[2025-10-16 15:21:18] -rw------- 1 boinc boinc      1021 Oct 16 15:20 memory_monitor_summary.json
[2025-10-16 15:21:18] -rw------- 1 boinc boinc    257113 Oct 16 15:20 log.46771637._008839.job.log.tgz.1
[2025-10-16 15:21:18] -rw------- 1 boinc boinc      7767 Oct 16 15:20 heartbeat.json
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc      8192 Oct 16 15:20 boinc_mmap_file
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc        27 Oct 16 15:20 wrapper_checkpoint.txt
[2025-10-16 15:21:18] -rw------- 1 boinc boinc       746 Oct 16 15:21 pilotlog.txt
[2025-10-16 15:21:18] -rw------- 1 boinc boinc        95 Oct 16 15:21 pilot_heartbeat.json
[2025-10-16 15:21:18] -rw------- 1 boinc boinc    599542 Oct 16 15:21 log.46771637._008839.job.log.1
[2025-10-16 15:21:18] -rw------- 1 boinc boinc       357 Oct 16 15:21 output.list
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc       620 Oct 16 15:21 runtime_log
[2025-10-16 15:21:18] -rw------- 1 boinc boinc    880640 Oct 16 15:21 result.tar.gz
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc      8672 Oct 16 15:21 runtime_log.err
[2025-10-16 15:21:18] -rw------- 1 boinc boinc       645 Oct 16 15:21 CedLDm17aT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmx2XMDmLAqMNm.diag
[2025-10-16 15:21:18] -rw-r--r-- 1 boinc boinc     22304 Oct 16 15:21 stderr.txt
[2025-10-16 15:21:18] HITS file was successfully produced:
[2025-10-16 15:21:18] -rw------- 1 boinc boinc 209017547 Oct 16 15:19 shared/HITS.pool.root.1
[2025-10-16 15:21:18]  *** Contents of shared directory: ***
[2025-10-16 15:21:18] total 429424
[2025-10-16 15:21:18] -rw-r--r-- 2 boinc boinc     15120 Oct 16 14:09 start_atlas.sh
[2025-10-16 15:21:18] -rw-r--r-- 2 boinc boinc    569678 Oct 16 14:09 input.tar.gz
[2025-10-16 15:21:18] -rw-r--r-- 2 boinc boinc 229239661 Oct 16 14:09 ATLAS.root_0
[2025-10-16 15:21:18] -rw------- 1 boinc boinc 209017547 Oct 16 15:19 HITS.pool.root.1
[2025-10-16 15:21:18] -rw------- 1 boinc boinc    880640 Oct 16 15:21 result.tar.gz
15:21:20 (111725): run_atlas exited; CPU time 19506.362114
15:21:20 (111725): called boinc_finish(0)

</stderr_txt>
]]>

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