Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
12:42:34 (83227): wrapper (7.7.26015): starting
12:42:34 (83227): wrapper: running run_atlas (--nthreads 5)
[2025-10-16 12:42:34] Arguments: --nthreads 5
[2025-10-16 12:42:34] Threads: 5
[2025-10-16 12:42:34] Checking for CVMFS
[2025-10-16 12:43:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 12:43:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 12:43:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 12:43:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 12:43:16] 2.13.1.0 83362 0 31868 151786 3 1 2713241 6144000 0 130560 0 0 100.000 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-16 12:43:16] CVMFS is ok
[2025-10-16 12:43:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 12:43:16] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-16 12:43:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-16 12:43:16] Further information can be found at the LHC@home message board.
[2025-10-16 12:43:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 12:43:16] Checking for apptainer binary...
[2025-10-16 12:43:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 12:43:16] Running /usr/bin/apptainer --version
[2025-10-16 12:43:16] apptainer version 1.4.2
[2025-10-16 12:43:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 12:43:16] riotskates
[2025-10-16 12:43:16] apptainer works
[2025-10-16 12:43:16] Set ATHENA_PROC_NUMBER=5
[2025-10-16 12:43:16] Set ATHENA_CORE_NUMBER=5
[2025-10-16 12:43:16] Starting ATLAS job with PandaID=6847313250
[2025-10-16 12:43:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 13:53:12]  *** The last 200 lines of the pilot log: ***
[2025-10-16 13:53:12]  storage_token=
[2025-10-16 13:53:12]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6847313250/log.46771637._010711.job.log.tgz.1
[2025-10-16 13:53:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/da/log.46771637._010711.job.log.tgz.1
[2025-10-16 13:53:12]  workdir=None
[2025-10-16 13:53:12] ]
[2025-10-16 13:53:12] 2025-10-16 18:52:31,975 | INFO     | transferring file log.46771637._010711.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6847313250/log.46771637._010711.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-16 13:53:12] 2025-10-16 18:52:31,975 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6847313250/log.46771637._010711.job.log.tgz.1 /var/lib/boinc/slots/0/log.46771637._010711.job
[2025-10-16 13:53:12] 2025-10-16 18:52:31,995 | INFO     | adding to output.list: log.46771637._010711.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/da/log.46771637._010711.job.log.tg
[2025-10-16 13:53:12] 2025-10-16 18:52:31,995 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-16 13:53:12] 2025-10-16 18:52:31,995 | INFO     | summary of transferred files:
[2025-10-16 13:53:12] 2025-10-16 18:52:31,995 | INFO     |  -- lfn=log.46771637._010711.job.log.tgz.1, status_code=0, status=transferred
[2025-10-16 13:53:12] 2025-10-16 18:52:31,995 | INFO     | stage-out finished correctly
[2025-10-16 13:53:12] 2025-10-16 18:52:32,889 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-16 13:53:12] 2025-10-16 18:52:33,282 | INFO     | job 6847313250 has state=finished
[2025-10-16 13:53:12] 2025-10-16 18:52:33,282 | INFO     | preparing for final server update for job 6847313250 in state='finished'
[2025-10-16 13:53:12] 2025-10-16 18:52:33,435 | INFO     | time since job start (4060s) is within the limit (172800.0s)
[2025-10-16 13:53:12] 2025-10-16 18:52:34,836 | WARNING  | exception caught in urlopen: <urlopen error [Errno -2] Name or service not known>
[2025-10-16 13:53:12] 2025-10-16 18:52:34,837 | WARNING  | failed to send data to https://pilot.atlas-ml.org: response=<urlopen error [Errno -2] Name or service not known>
[2025-10-16 13:53:12] 2025-10-16 18:52:34,837 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /var/lib/boinc/slots/0/PanDA_Pilot-6847313250
[2025-10-16 13:53:12] 2025-10-16 18:52:35,399 | INFO     | sent prmon JSON dictionary to logstash server (curl method)
[2025-10-16 13:53:12] 2025-10-16 18:52:35,400 | INFO     | this job has now completed (state=finished)
[2025-10-16 13:53:12] 2025-10-16 18:52:35,400 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-16 13:53:12] 2025-10-16 18:52:35,400 | INFO     | log transfer has been attempted: DONE
[2025-10-16 13:53:12] 2025-10-16 18:52:35,400 | INFO     | job 6847313250 has finished - writing final server update
[2025-10-16 13:53:12] 2025-10-16 18:52:35,400 | INFO     | total number of processed events: 400 (read)
[2025-10-16 13:53:12] 2025-10-16 18:52:35,402 | INFO     | executing command: lscpu
[2025-10-16 13:53:12] 2025-10-16 18:52:35,437 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-16 13:53:12] 2025-10-16 18:52:35,445 | INFO     | time since job start (4062s) is within the limit (172800.0s)
[2025-10-16 13:53:12] 2025-10-16 18:52:37,187 | WARNING  | process 93895 can no longer be monitored (due to stat problems) - aborting
[2025-10-16 13:53:12] 2025-10-16 18:52:37,187 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6847313250/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 13:53:12] 2025-10-16 18:52:37,233 | INFO     | number of running child processes to parent process 93895: 1
[2025-10-16 13:53:12] 2025-10-16 18:52:37,233 | INFO     | maximum number of monitored processes: 6
[2025-10-16 13:53:12] 2025-10-16 18:52:37,449 | INFO     | time since job start (4064s) is within the limit (172800.0s)
[2025-10-16 13:53:12] 2025-10-16 18:52:39,452 | INFO     | time since job start (4066s) is within the limit (172800.0s)
[2025-10-16 13:53:12] 2025-10-16 18:52:39,736 | INFO     | monitor loop #300: job 0:6847313250 is in state 'finished'
[2025-10-16 13:53:12] 2025-10-16 18:52:39,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 13:53:12] 2025-10-16 18:52:40,564 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-16 13:53:12] 2025-10-16 18:52:40,565 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 2011.6355
[2025-10-16 13:53:12] 2025-10-16 18:52:40,566 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6847313250/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 13:53:12] 2025-10-16 18:52:40,567 | INFO     | extracted standard info from prmon json
[2025-10-16 13:53:12] 2025-10-16 18:52:40,567 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 13:53:12] 2025-10-16 18:52:40,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 13:53:12] 2025-10-16 18:52:40,567 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 13:53:12] 2025-10-16 18:52:40,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 13:53:12] 2025-10-16 18:52:40,567 | INFO     | fitting pss+swap vs Time
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | sum of square deviations: 63666310.0
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | sum of deviations: -5338395296.999999
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | mean x: 1760638797.0
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | mean y: 2469131.220338983
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | -- intersect: 147631346533.1074
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | intersect: 147631346533.1074
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | chi2: 0.11350666871234859
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | -- intersect: 147631346533.1074
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | current memory leak: -83.85 B/s (using 59 data points, chi2=0.11)
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | could have reported an average CPU frequency of 2733 MHz (6 samples)
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | ..............................
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | . Timing measurements:
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | . get job = 0 s
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | . initial setup = 6 s
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | . payload setup = 7 s
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | . stage-in = 0 s
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | . payload execution = 4029 s
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | . stage-out = 0 s
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | . log creation = 0 s
[2025-10-16 13:53:12] 2025-10-16 18:52:40,568 | INFO     | ..............................
[2025-10-16 13:53:12] 2025-10-16 18:52:41,005 | INFO     | 
[2025-10-16 13:53:12] 2025-10-16 18:52:41,006 | INFO     | job summary report
[2025-10-16 13:53:12] 2025-10-16 18:52:41,006 | INFO     | --------------------------------------------------
[2025-10-16 13:53:12] 2025-10-16 18:52:41,006 | INFO     | PanDA job id: 6847313250
[2025-10-16 13:53:12] 2025-10-16 18:52:41,006 | INFO     | task id: 46771637
[2025-10-16 13:53:12] 2025-10-16 18:52:41,006 | INFO     | errors: (none)
[2025-10-16 13:53:12] 2025-10-16 18:52:41,006 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 13:53:12] 2025-10-16 18:52:41,006 | INFO     | pilot state: finished 
[2025-10-16 13:53:12] 2025-10-16 18:52:41,006 | INFO     | transexitcode: 0
[2025-10-16 13:53:12] 2025-10-16 18:52:41,006 | INFO     | exeerrorcode: 0
[2025-10-16 13:53:12] 2025-10-16 18:52:41,006 | INFO     | exeerrordiag: 
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | exitcode: 0
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | exitmsg: OK
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | cpuconsumptiontime: 18793 s
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | nevents: 400
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | neventsw: 0
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | pid: 93895
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | pgrp: 93895
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | corecount: 5
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | event service: False
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | sizes: {0: 2348955, 6: 2349217, 11: 2349245, 4040: 2375190, 4041: 2384188, 4042: 2384244, 4050: 2384566}
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | --------------------------------------------------
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | 
[2025-10-16 13:53:12] 2025-10-16 18:52:41,007 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-16 13:53:12] 2025-10-16 18:52:41,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,028 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,028 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,028 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 13:53:12] 2025-10-16 18:52:41,030 | INFO     | job 6847313250 has completed (purged errors)
[2025-10-16 13:53:12] 2025-10-16 18:52:41,030 | INFO     | overall cleanup function is called
[2025-10-16 13:53:12] 2025-10-16 18:52:42,037 | INFO     | --- collectZombieJob: --- 10, [93895]
[2025-10-16 13:53:12] 2025-10-16 18:52:42,037 | INFO     | zombie collector waiting for pid 93895
[2025-10-16 13:53:12] 2025-10-16 18:52:42,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 13:53:12] 2025-10-16 18:52:42,038 | INFO     | collected zombie processes
[2025-10-16 13:53:12] 2025-10-16 18:52:42,038 | INFO     | will attempt to kill all subprocesses of pid=93895
[2025-10-16 13:53:12] 2025-10-16 18:52:42,118 | INFO     | process IDs to be killed: [93895] (in reverse order)
[2025-10-16 13:53:12] 2025-10-16 18:52:42,180 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 13:53:12] 2025-10-16 18:52:42,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 13:53:12] 2025-10-16 18:52:42,183 | INFO     | did not find any defunct processes belonging to 93895
[2025-10-16 13:53:12] 2025-10-16 18:52:42,185 | INFO     | did not find any defunct processes belonging to 93895
[2025-10-16 13:53:12] 2025-10-16 18:52:42,185 | INFO     | ready for new job
[2025-10-16 13:53:12] 2025-10-16 18:52:42,185 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 13:53:12] 2025-10-16 18:52:42,186 | INFO     | ***************************************
[2025-10-16 13:53:12] 2025-10-16 18:52:42,186 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 13:53:12] 2025-10-16 18:52:42,186 | INFO     | ***************************************
[2025-10-16 13:53:12] 2025-10-16 18:52:42,186 | INFO     | 
[2025-10-16 13:53:12] 2025-10-16 18:52:42,186 | INFO     | architecture information:
[2025-10-16 13:53:12] 2025-10-16 18:52:42,187 | INFO     | executing command: cat /etc/os-release
[2025-10-16 13:53:12] 2025-10-16 18:52:42,203 | INFO     | cat /etc/os-release:
[2025-10-16 13:53:12] NAME="CentOS Linux"
[2025-10-16 13:53:12] VERSION="7 (Core)"
[2025-10-16 13:53:12] ID="centos"
[2025-10-16 13:53:12] ID_LIKE="rhel fedora"
[2025-10-16 13:53:12] VERSION_ID="7"
[2025-10-16 13:53:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 13:53:12] ANSI_COLOR="0;31"
[2025-10-16 13:53:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 13:53:12] HOME_URL="https://www.centos.org/"
[2025-10-16 13:53:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 13:53:12] 
[2025-10-16 13:53:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 13:53:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 13:53:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 13:53:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 13:53:12] 
[2025-10-16 13:53:12] 2025-10-16 18:52:42,204 | INFO     | ***************************************
[2025-10-16 13:53:12] 2025-10-16 18:52:42,706 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-16 13:53:12] 2025-10-16 18:52:42,716 | INFO     | sufficient remaining disk space (509555507200 B)
[2025-10-16 13:53:12] 2025-10-16 18:52:42,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 13:53:12] 2025-10-16 18:52:42,717 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 13:53:12] 2025-10-16 18:52:42,717 | INFO     | update_server=False
[2025-10-16 13:53:12] 2025-10-16 18:52:42,717 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 13:53:12] 2025-10-16 18:52:42,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 13:53:12] 2025-10-16 18:52:42,823 | INFO     | all data control threads have been joined
[2025-10-16 13:53:12] 2025-10-16 18:52:43,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 13:53:12] 2025-10-16 18:52:43,245 | INFO     | aborting loop
[2025-10-16 13:53:12] 2025-10-16 18:52:43,276 | INFO     | all payload control threads have been joined
[2025-10-16 13:53:12] 2025-10-16 18:52:43,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 13:53:12] 2025-10-16 18:52:43,723 | INFO     | [job] retrieve thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:43,788 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:43,829 | INFO     | [data] control thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:43,899 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:44,192 | INFO     | [payload] failed_post thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:44,203 | INFO     | all job control threads have been joined
[2025-10-16 13:53:12] 2025-10-16 18:52:44,215 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:44,250 | INFO     | [job] job monitor thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:44,277 | INFO     | [payload] control thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:44,723 | INFO     | [data] copytool_out thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:45,052 | INFO     | [job] validate thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:45,099 | INFO     | [payload] validate_post thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:45,206 | INFO     | [job] control thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:45,209 | INFO     | [data] copytool_in thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:45,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 13:53:12] 2025-10-16 18:52:46,626 | INFO     | [job] queue monitor thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:47,479 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:53,574 | INFO     | job.realtimelogging is not enabled
[2025-10-16 13:53:12] 2025-10-16 18:52:54,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 13:53:12] 2025-10-16 18:52:58,596 | INFO     | [monitor] cgroup control has ended
[2025-10-16 13:53:12] 2025-10-16 18:52:59,152 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324915320640)>', '<ExcThread(monitor, started 140323669919488)>']
[2025-10-16 13:53:12] 2025-10-16 18:53:04,178 | INFO     | all workflow threads have been joined
[2025-10-16 13:53:12] 2025-10-16 18:53:04,178 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 13:53:12] 2025-10-16 18:53:04,178 | INFO     | traces error code: 0
[2025-10-16 13:53:12] 2025-10-16 18:53:04,179 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 13:53:12] 2025-10-16 18:53:12,649 | INFO     | PID=87467 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-16 13:53:12] 2025-10-16 18:53:12,650 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 13:53:12] 2025-10-16 18:53:12,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 13:53:12] 2025-10-16 18:53:12,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 13:53:12] 2025-10-16 18:53:12,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 13:53:12] 2025-10-16 18:53:12,650 | INFO     | [monitor] control thread has ended
[2025-10-16 13:53:12] 2025-10-16 18:53:12,737 [wrapper] ==== pilot stdout END ====
[2025-10-16 13:53:12] 2025-10-16 18:53:12,739 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 13:53:12] 2025-10-16 18:53:12,742 [wrapper] pilotpid: 87467
[2025-10-16 13:53:12] 2025-10-16 18:53:12,744 [wrapper] Pilot exit status: 0
[2025-10-16 13:53:12] 2025-10-16 18:53:12,753 [wrapper] pandaids: 6847313250
[2025-10-16 13:53:12] 2025-10-16 18:53:12,792 [wrapper] cleanup supervisor_pilot  103698 87468
[2025-10-16 13:53:12] 2025-10-16 18:53:12,795 [wrapper] Test setup, not cleaning
[2025-10-16 13:53:12] 2025-10-16 18:53:12,799 [wrapper] apfmon messages muted
[2025-10-16 13:53:12] 2025-10-16 18:53:12,802 [wrapper] ==== wrapper stdout END ====
[2025-10-16 13:53:12] 2025-10-16 18:53:12,805 [wrapper] ==== wrapper stderr END ====
[2025-10-16 13:53:12]  *** Error codes and diagnostics ***
[2025-10-16 13:53:12]     "exeErrorCode": 0,
[2025-10-16 13:53:12]     "exeErrorDiag": "",
[2025-10-16 13:53:12]     "pilotErrorCode": 0,
[2025-10-16 13:53:12]     "pilotErrorDiag": "",
[2025-10-16 13:53:12]  *** Listing of results directory ***
[2025-10-16 13:53:12] total 431176
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc    557409 Oct 16 08:38 pilot3.tar.gz
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc      5112 Oct 16 08:52 queuedata.json
[2025-10-16 13:53:12] -rwx------ 1 boinc boinc     36292 Oct 16 08:57 runpilot2-wrapper.sh
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc       100 Oct 16 12:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 13:53:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 12:42 run_atlas
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc       105 Oct 16 12:42 job.xml
[2025-10-16 13:53:12] -rw-r--r-- 2 boinc boinc     15120 Oct 16 12:42 start_atlas.sh
[2025-10-16 13:53:12] drwxrwx--x 2 boinc boinc        68 Oct 16 12:42 shared
[2025-10-16 13:53:12] -rw-r--r-- 2 boinc boinc    569678 Oct 16 12:42 input.tar.gz
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc      6350 Oct 16 12:42 init_data.xml
[2025-10-16 13:53:12] -rw-r--r-- 2 boinc boinc 229745692 Oct 16 12:42 EVNT.46771634._000579.pool.root.1
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc         0 Oct 16 12:42 boinc_setup_complete
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc         0 Oct 16 12:42 boinc_lockfile
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc      2557 Oct 16 12:43 pandaJob.out
[2025-10-16 13:53:12] -rw------- 1 boinc boinc    976761 Oct 16 12:44 agis_schedconf.cvmfs.json
[2025-10-16 13:53:12] -rw------- 1 boinc boinc   1560740 Oct 16 12:44 agis_ddmendpoints.agis.ALL.json
[2025-10-16 13:53:12] drwx------ 5 boinc boinc      4096 Oct 16 12:44 pilot3
[2025-10-16 13:53:12] -rw------- 1 boinc boinc 206135185 Oct 16 13:52 HITS.46771637._010711.pool.root.1
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc       529 Oct 16 13:52 boinc_task_state.xml
[2025-10-16 13:53:12] -rw------- 1 boinc boinc      1022 Oct 16 13:52 memory_monitor_summary.json
[2025-10-16 13:53:12] -rw------- 1 boinc boinc    285631 Oct 16 13:52 log.46771637._010711.job.log.tgz.1
[2025-10-16 13:53:12] -rw------- 1 boinc boinc      7767 Oct 16 13:52 heartbeat.json
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc      8192 Oct 16 13:52 boinc_mmap_file
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc        27 Oct 16 13:52 wrapper_checkpoint.txt
[2025-10-16 13:53:12] -rw------- 1 boinc boinc       745 Oct 16 13:53 pilotlog.txt
[2025-10-16 13:53:12] -rw------- 1 boinc boinc        95 Oct 16 13:53 pilot_heartbeat.json
[2025-10-16 13:53:12] -rw------- 1 boinc boinc    591583 Oct 16 13:53 log.46771637._010711.job.log.1
[2025-10-16 13:53:12] -rw------- 1 boinc boinc       357 Oct 16 13:53 output.list
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc       620 Oct 16 13:53 runtime_log
[2025-10-16 13:53:12] -rw------- 1 boinc boinc    901120 Oct 16 13:53 result.tar.gz
[2025-10-16 13:53:12] -rw------- 1 boinc boinc       646 Oct 16 13:53 Um1KDmRfdT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaWqNDm8ZIPbm.diag
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc      8672 Oct 16 13:53 runtime_log.err
[2025-10-16 13:53:12] -rw-r--r-- 1 boinc boinc     22347 Oct 16 13:53 stderr.txt
[2025-10-16 13:53:12] HITS file was successfully produced:
[2025-10-16 13:53:12] -rw------- 1 boinc boinc 206135185 Oct 16 13:52 shared/HITS.pool.root.1
[2025-10-16 13:53:12]  *** Contents of shared directory: ***
[2025-10-16 13:53:12] total 427124
[2025-10-16 13:53:12] -rw-r--r-- 2 boinc boinc     15120 Oct 16 12:42 start_atlas.sh
[2025-10-16 13:53:12] -rw-r--r-- 2 boinc boinc    569678 Oct 16 12:42 input.tar.gz
[2025-10-16 13:53:12] -rw-r--r-- 2 boinc boinc 229745692 Oct 16 12:42 ATLAS.root_0
[2025-10-16 13:53:12] -rw------- 1 boinc boinc 206135185 Oct 16 13:52 HITS.pool.root.1
[2025-10-16 13:53:12] -rw------- 1 boinc boinc    901120 Oct 16 13:53 result.tar.gz
13:53:14 (83227): run_atlas exited; CPU time 18816.013032
13:53:14 (83227): called boinc_finish(0)

</stderr_txt>
]]>

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