Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:59:39 (5499): wrapper (7.7.26015): starting
12:59:39 (5499): wrapper: running run_atlas (--nthreads 8)
[2025-10-16 12:59:39] Arguments: --nthreads 8
[2025-10-16 12:59:39] Threads: 8
[2025-10-16 12:59:39] Checking for CVMFS
[2025-10-16 12:59:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 12:59:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 12:59:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 12:59:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 12:59:39] 2.11.2.0 2851 147002 81872 151784 0 57 15797223 20275201 1 130560 1 61752602 99.987 4706120 25332 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-16 12:59:39] CVMFS is ok
[2025-10-16 12:59:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 12:59:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 12:59:39] Further information can be found at the LHC@home message board.
[2025-10-16 12:59:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 12:59:39] Checking for apptainer binary...
[2025-10-16 12:59:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 12:59:39] Running /usr/bin/apptainer --version
[2025-10-16 12:59:39] apptainer version 1.3.2-1.el7
[2025-10-16 12:59:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 12:59:41] c-115-9.aglt2.org
[2025-10-16 12:59:41] apptainer works
[2025-10-16 12:59:41] Set ATHENA_PROC_NUMBER=8
[2025-10-16 12:59:41] Set ATHENA_CORE_NUMBER=8
[2025-10-16 12:59:41] Starting ATLAS job with PandaID=6846965067
[2025-10-16 12:59:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 15:00:16]  *** The last 200 lines of the pilot log: ***
[2025-10-16 15:00:16] 2025-10-16 18:59:08,466 | INFO     | monitor loop #532: job 0:6846965067 is in state 'finished'
[2025-10-16 15:00:16] 2025-10-16 18:59:08,467 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,284 | INFO     | time since job start (7152s) is within the limit (172800.0s)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,454 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-16 15:00:16] 2025-10-16 18:59:10,457 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-10-16 15:00:16] 2025-10-16 18:59:10,459 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6846965067/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,460 | INFO     | extracted standard info from prmon json
[2025-10-16 15:00:16] 2025-10-16 18:59:10,461 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 15:00:16] 2025-10-16 18:59:10,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 15:00:16] 2025-10-16 18:59:10,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 15:00:16] 2025-10-16 18:59:10,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 15:00:16] 2025-10-16 18:59:10,463 | INFO     | fitting pss+swap vs Time
[2025-10-16 15:00:16] 2025-10-16 18:59:10,464 | INFO     | sum of square deviations: 496597218.0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,464 | INFO     | sum of deviations: 5582812537.0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,464 | INFO     | mean x: 1760637567.0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,464 | INFO     | mean y: 2516360.376068376
[2025-10-16 15:00:16] 2025-10-16 18:59:10,465 | INFO     | -- intersect: -19790807335.127956
[2025-10-16 15:00:16] 2025-10-16 18:59:10,465 | INFO     | intersect: -19790807335.127956
[2025-10-16 15:00:16] 2025-10-16 18:59:10,465 | INFO     | chi2: 1.434736112415399
[2025-10-16 15:00:16] 2025-10-16 18:59:10,465 | INFO     | sum of square deviations: 435610028.0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,466 | INFO     | sum of deviations: 5413757502.999998
[2025-10-16 15:00:16] 2025-10-16 18:59:10,466 | INFO     | mean x: 1760637414.5
[2025-10-16 15:00:16] 2025-10-16 18:59:10,466 | INFO     | mean y: 2515937.3928571427
[2025-10-16 15:00:16] 2025-10-16 18:59:10,466 | INFO     | -- intersect: -21878669986.11369
[2025-10-16 15:00:16] 2025-10-16 18:59:10,466 | INFO     | intersect: -21878669986.11369
[2025-10-16 15:00:16] 2025-10-16 18:59:10,466 | INFO     | chi2: 1.4368748810586423
[2025-10-16 15:00:16] 2025-10-16 18:59:10,467 | INFO     | current chi2=1.4368748810586423 (change=-0.14907052417065056 %)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,467 | INFO     | right removable region: 111
[2025-10-16 15:00:16] 2025-10-16 18:59:10,467 | INFO     | sum of square deviations: 435610028.0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,467 | INFO     | sum of deviations: -10395638910.000002
[2025-10-16 15:00:16] 2025-10-16 18:59:10,468 | INFO     | mean x: 1760637719.5
[2025-10-16 15:00:16] 2025-10-16 18:59:10,468 | INFO     | mean y: 2555457.5178571427
[2025-10-16 15:00:16] 2025-10-16 18:59:10,468 | INFO     | -- intersect: 42019388879.102615
[2025-10-16 15:00:16] 2025-10-16 18:59:10,468 | INFO     | intersect: 42019388879.102615
[2025-10-16 15:00:16] 2025-10-16 18:59:10,468 | INFO     | chi2: 0.08760553772448226
[2025-10-16 15:00:16] 2025-10-16 18:59:10,468 | INFO     | current chi2=0.08760553772448226 (change=93.89396161660719 %)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,469 | INFO     | sum of square deviations: 379832238.0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,469 | INFO     | sum of deviations: -7156028767.000001
[2025-10-16 15:00:16] 2025-10-16 18:59:10,469 | INFO     | mean x: 1760637872.0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,469 | INFO     | mean y: 2546567.8411214952
[2025-10-16 15:00:16] 2025-10-16 18:59:10,470 | INFO     | -- intersect: 33172914956.376022
[2025-10-16 15:00:16] 2025-10-16 18:59:10,470 | INFO     | intersect: 33172914956.376022
[2025-10-16 15:00:16] 2025-10-16 18:59:10,470 | INFO     | chi2: 0.07679777282536784
[2025-10-16 15:00:16] 2025-10-16 18:59:10,470 | INFO     | current chi2=0.07679777282536784 (change=12.336851276576411 %)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,470 | INFO     | left removable region: 20
[2025-10-16 15:00:16] 2025-10-16 18:59:10,470 | INFO     | sum of square deviations: 233641590.0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,471 | INFO     | sum of deviations: 659440866.0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,471 | INFO     | mean x: 1760637994.0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,471 | INFO     | mean y: 2521328.054945055
[2025-10-16 15:00:16] 2025-10-16 18:59:10,471 | INFO     | -- intersect: -4966785050.4706545
[2025-10-16 15:00:16] 2025-10-16 18:59:10,471 | INFO     | intersect: -4966785050.4706545
[2025-10-16 15:00:16] 2025-10-16 18:59:10,471 | INFO     | chi2: 0.00022412976080713273
[2025-10-16 15:00:16] 2025-10-16 18:59:10,471 | INFO     | -- intersect: -4966785050.4706545
[2025-10-16 15:00:16] 2025-10-16 18:59:10,472 | INFO     | current memory leak: 2.82 B/s (using 91 data points, chi2=0.00)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,472 | INFO     | could have reported an average CPU frequency of 2102 MHz (7 samples)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,472 | INFO     | ..............................
[2025-10-16 15:00:16] 2025-10-16 18:59:10,472 | INFO     | . Timing measurements:
[2025-10-16 15:00:16] 2025-10-16 18:59:10,472 | INFO     | . get job = 0 s
[2025-10-16 15:00:16] 2025-10-16 18:59:10,472 | INFO     | . initial setup = 2 s
[2025-10-16 15:00:16] 2025-10-16 18:59:10,473 | INFO     | . payload setup = 8 s
[2025-10-16 15:00:16] 2025-10-16 18:59:10,473 | INFO     | . stage-in = 0 s
[2025-10-16 15:00:16] 2025-10-16 18:59:10,473 | INFO     | . payload execution = 7114 s
[2025-10-16 15:00:16] 2025-10-16 18:59:10,473 | INFO     | . stage-out = 0 s
[2025-10-16 15:00:16] 2025-10-16 18:59:10,473 | INFO     | . log creation = 0 s
[2025-10-16 15:00:16] 2025-10-16 18:59:10,473 | INFO     | ..............................
[2025-10-16 15:00:16] 2025-10-16 18:59:10,556 | INFO     | 
[2025-10-16 15:00:16] 2025-10-16 18:59:10,557 | INFO     | job summary report
[2025-10-16 15:00:16] 2025-10-16 18:59:10,557 | INFO     | --------------------------------------------------
[2025-10-16 15:00:16] 2025-10-16 18:59:10,557 | INFO     | PanDA job id: 6846965067
[2025-10-16 15:00:16] 2025-10-16 18:59:10,557 | INFO     | task id: 46776533
[2025-10-16 15:00:16] 2025-10-16 18:59:10,557 | INFO     | errors: (none)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,557 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 15:00:16] 2025-10-16 18:59:10,557 | INFO     | pilot state: finished 
[2025-10-16 15:00:16] 2025-10-16 18:59:10,557 | INFO     | transexitcode: 0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,558 | INFO     | exeerrorcode: 0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,558 | INFO     | exeerrordiag: 
[2025-10-16 15:00:16] 2025-10-16 18:59:10,558 | INFO     | exitcode: 0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,558 | INFO     | exitmsg: OK
[2025-10-16 15:00:16] 2025-10-16 18:59:10,558 | INFO     | cpuconsumptiontime: 52386 s
[2025-10-16 15:00:16] 2025-10-16 18:59:10,558 | INFO     | nevents: 400
[2025-10-16 15:00:16] 2025-10-16 18:59:10,558 | INFO     | neventsw: 0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,558 | INFO     | pid: 15865
[2025-10-16 15:00:16] 2025-10-16 18:59:10,558 | INFO     | pgrp: 15865
[2025-10-16 15:00:16] 2025-10-16 18:59:10,559 | INFO     | corecount: 8
[2025-10-16 15:00:16] 2025-10-16 18:59:10,559 | INFO     | event service: False
[2025-10-16 15:00:16] 2025-10-16 18:59:10,559 | INFO     | sizes: {0: 2348930, 6: 2349192, 11: 2349220, 7125: 2376472, 7126: 2385470, 7129: 2385526, 7135: 2385848}
[2025-10-16 15:00:16] 2025-10-16 18:59:10,559 | INFO     | --------------------------------------------------
[2025-10-16 15:00:16] 2025-10-16 18:59:10,559 | INFO     | 
[2025-10-16 15:00:16] 2025-10-16 18:59:10,559 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-16 15:00:16] 2025-10-16 18:59:10,587 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,587 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,588 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,588 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,591 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,591 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 15:00:16] 2025-10-16 18:59:10,591 | INFO     | job 6846965067 has completed (purged errors)
[2025-10-16 15:00:16] 2025-10-16 18:59:10,591 | INFO     | overall cleanup function is called
[2025-10-16 15:00:16] 2025-10-16 18:59:11,599 | INFO     | --- collectZombieJob: --- 10, [15865]
[2025-10-16 15:00:16] 2025-10-16 18:59:11,599 | INFO     | zombie collector waiting for pid 15865
[2025-10-16 15:00:16] 2025-10-16 18:59:11,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 15:00:16] 2025-10-16 18:59:11,599 | INFO     | collected zombie processes
[2025-10-16 15:00:16] 2025-10-16 18:59:11,600 | INFO     | will attempt to kill all subprocesses of pid=15865
[2025-10-16 15:00:16] 2025-10-16 18:59:11,681 | INFO     | process IDs to be killed: [15865] (in reverse order)
[2025-10-16 15:00:16] 2025-10-16 18:59:11,734 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 15:00:16] 2025-10-16 18:59:11,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 15:00:16] 2025-10-16 18:59:11,740 | INFO     | did not find any defunct processes belonging to 15865
[2025-10-16 15:00:16] 2025-10-16 18:59:11,743 | INFO     | did not find any defunct processes belonging to 15865
[2025-10-16 15:00:16] 2025-10-16 18:59:11,744 | INFO     | ready for new job
[2025-10-16 15:00:16] 2025-10-16 18:59:11,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 15:00:16] 2025-10-16 18:59:11,746 | INFO     | ***************************************
[2025-10-16 15:00:16] 2025-10-16 18:59:11,746 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-16 15:00:16] 2025-10-16 18:59:11,746 | INFO     | ***************************************
[2025-10-16 15:00:16] 2025-10-16 18:59:11,746 | INFO     | 
[2025-10-16 15:00:16] 2025-10-16 18:59:11,746 | INFO     | architecture information:
[2025-10-16 15:00:16] 2025-10-16 18:59:11,747 | INFO     | executing command: cat /etc/os-release
[2025-10-16 15:00:16] 2025-10-16 18:59:11,767 | INFO     | cat /etc/os-release:
[2025-10-16 15:00:16] NAME="CentOS Linux"
[2025-10-16 15:00:16] VERSION="7 (Core)"
[2025-10-16 15:00:16] ID="centos"
[2025-10-16 15:00:16] ID_LIKE="rhel fedora"
[2025-10-16 15:00:16] VERSION_ID="7"
[2025-10-16 15:00:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 15:00:16] ANSI_COLOR="0;31"
[2025-10-16 15:00:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 15:00:16] HOME_URL="https://www.centos.org/"
[2025-10-16 15:00:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 15:00:16] 
[2025-10-16 15:00:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 15:00:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 15:00:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 15:00:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 15:00:16] 
[2025-10-16 15:00:16] 2025-10-16 18:59:11,768 | INFO     | ***************************************
[2025-10-16 15:00:16] 2025-10-16 18:59:12,271 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-16 15:00:16] 2025-10-16 18:59:12,291 | INFO     | sufficient remaining disk space (18572378112 B)
[2025-10-16 15:00:16] 2025-10-16 18:59:12,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 15:00:16] 2025-10-16 18:59:12,292 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 15:00:16] 2025-10-16 18:59:12,292 | INFO     | update_server=False
[2025-10-16 15:00:16] 2025-10-16 18:59:12,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 15:00:16] 2025-10-16 18:59:12,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 15:00:16] 2025-10-16 18:59:12,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 15:00:16] 2025-10-16 18:59:12,293 | INFO     | aborting loop
[2025-10-16 15:00:16] 2025-10-16 18:59:12,675 | INFO     | all data control threads have been joined
[2025-10-16 15:00:16] 2025-10-16 18:59:12,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 15:00:16] 2025-10-16 18:59:12,965 | INFO     | all payload control threads have been joined
[2025-10-16 15:00:16] 2025-10-16 18:59:13,127 | INFO     | all job control threads have been joined
[2025-10-16 15:00:16] 2025-10-16 18:59:13,297 | INFO     | [job] queue monitor thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:13,298 | INFO     | [job] retrieve thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:13,298 | INFO     | [job] job monitor thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:13,462 | INFO     | [payload] validate_post thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:13,680 | INFO     | [data] control thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:13,913 | INFO     | [job] validate thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:13,952 | INFO     | [data] copytool_in thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:13,971 | INFO     | [payload] control thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:14,128 | INFO     | [job] control thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:14,176 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:14,421 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:14,449 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:14,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:14,700 | INFO     | [data] copytool_out thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:14,701 | INFO     | [payload] failed_post thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:15,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 15:00:16] 2025-10-16 18:59:19,354 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 15:00:16] 2025-10-16 18:59:43,400 | INFO     | PID=9236 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-16 15:00:16] 2025-10-16 18:59:43,401 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 15:00:16] 2025-10-16 18:59:43,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 15:00:16] 2025-10-16 18:59:43,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 15:00:16] 2025-10-16 18:59:56,080 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-16 15:00:16] 2025-10-16 19:00:09,778 | INFO     | [monitor] cgroup control has ended
[2025-10-16 15:00:16] 2025-10-16 19:00:11,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896885634880)>', '<ExcThread(monitor, started 139896438105856)>']
[2025-10-16 15:00:16] 2025-10-16 19:00:11,519 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 15:00:16] 2025-10-16 19:00:11,519 | INFO     | [monitor] control thread has ended
[2025-10-16 15:00:16] 2025-10-16 19:00:16,535 | INFO     | all workflow threads have been joined
[2025-10-16 15:00:16] 2025-10-16 19:00:16,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 15:00:16] 2025-10-16 19:00:16,536 | INFO     | traces error code: 0
[2025-10-16 15:00:16] 2025-10-16 19:00:16,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 15:00:16] 2025-10-16 19:00:16,642 [wrapper] ==== pilot stdout END ====
[2025-10-16 15:00:16] 2025-10-16 19:00:16,646 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 15:00:16] 2025-10-16 19:00:16,651 [wrapper] pilotpid: 9236
[2025-10-16 15:00:16] 2025-10-16 19:00:16,655 [wrapper] Pilot exit status: 0
[2025-10-16 15:00:16] 2025-10-16 19:00:16,675 [wrapper] pandaids: 6846965067
[2025-10-16 15:00:16] 2025-10-16 19:00:16,729 [wrapper] cleanup supervisor_pilot  2758 9237
[2025-10-16 15:00:16] 2025-10-16 19:00:16,734 [wrapper] Test setup, not cleaning
[2025-10-16 15:00:16] 2025-10-16 19:00:16,739 [wrapper] apfmon messages muted
[2025-10-16 15:00:16] 2025-10-16 19:00:16,743 [wrapper] ==== wrapper stdout END ====
[2025-10-16 15:00:16] 2025-10-16 19:00:16,748 [wrapper] ==== wrapper stderr END ====
[2025-10-16 15:00:16]  *** Error codes and diagnostics ***
[2025-10-16 15:00:16]     "exeErrorCode": 0,
[2025-10-16 15:00:16]     "exeErrorDiag": "",
[2025-10-16 15:00:16]     "pilotErrorCode": 0,
[2025-10-16 15:00:16]     "pilotErrorDiag": "",
[2025-10-16 15:00:16]  *** Listing of results directory ***
[2025-10-16 15:00:16] total 423864
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas      5112 Oct 16 02:00 queuedata.json
[2025-10-16 15:00:16] -rwx------ 1 boincer umatlas     36292 Oct 16 02:03 runpilot2-wrapper.sh
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas       100 Oct 16 12:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 15:00:16] -rwxr-xr-x 1 boincer umatlas      7986 Oct 16 12:59 run_atlas
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas       105 Oct 16 12:59 job.xml
[2025-10-16 15:00:16] -rw-r--r-- 2 boincer umatlas 225707127 Oct 16 12:59 EVNT.46776529._000459.pool.root.1
[2025-10-16 15:00:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 16 12:59 start_atlas.sh
[2025-10-16 15:00:16] drwxrwx--x 2 boincer umatlas      4096 Oct 16 12:59 shared
[2025-10-16 15:00:16] -rw-r--r-- 2 boincer umatlas    576702 Oct 16 12:59 input.tar.gz
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas         0 Oct 16 12:59 boinc_lockfile
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas      2560 Oct 16 12:59 pandaJob.out
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas    976769 Oct 16 12:59 agis_schedconf.cvmfs.json
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas   1560740 Oct 16 12:59 agis_ddmendpoints.agis.ALL.json
[2025-10-16 15:00:16] drwx------ 4 boincer umatlas      4096 Oct 16 12:59 pilot3
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas      5909 Oct 16 14:56 init_data.xml
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas 201713803 Oct 16 14:58 HITS.46776533._011699.pool.root.1
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas       530 Oct 16 14:58 boinc_task_state.xml
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas      1051 Oct 16 14:58 memory_monitor_summary.json
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas    353365 Oct 16 14:59 log.46776533._011699.job.log.tgz.1
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas      7841 Oct 16 14:59 heartbeat.json
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas        95 Oct 16 14:59 pilot_heartbeat.json
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas        27 Oct 16 14:59 wrapper_checkpoint.txt
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas      8192 Oct 16 14:59 boinc_mmap_file
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas      4745 Oct 16 15:00 pilotlog.txt
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas   1002954 Oct 16 15:00 log.46776533._011699.job.log.1
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas       357 Oct 16 15:00 output.list
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas       620 Oct 16 15:00 runtime_log
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas   1372160 Oct 16 15:00 result.tar.gz
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas      8698 Oct 16 15:00 runtime_log.err
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas       658 Oct 16 15:00 EOrMDmMGWT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7vpNDmF9fcpn.diag
[2025-10-16 15:00:16] -rw-r--r-- 1 boincer umatlas     21077 Oct 16 15:00 stderr.txt
[2025-10-16 15:00:16] HITS file was successfully produced:
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas 201713803 Oct 16 14:58 shared/HITS.pool.root.1
[2025-10-16 15:00:16]  *** Contents of shared directory: ***
[2025-10-16 15:00:16] total 419328
[2025-10-16 15:00:16] -rw-r--r-- 2 boincer umatlas 225707127 Oct 16 12:59 ATLAS.root_0
[2025-10-16 15:00:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 16 12:59 start_atlas.sh
[2025-10-16 15:00:16] -rw-r--r-- 2 boincer umatlas    576702 Oct 16 12:59 input.tar.gz
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas 201713803 Oct 16 14:58 HITS.pool.root.1
[2025-10-16 15:00:16] -rw------- 1 boincer umatlas   1372160 Oct 16 15:00 result.tar.gz
15:00:18 (5499): run_atlas exited; CPU time 52361.311699
15:00:18 (5499): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN