Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
10:15:24 (31072): wrapper (7.7.26015): starting
10:15:24 (31072): wrapper: running run_atlas (--nthreads 5)
[2025-10-16 10:15:24] Arguments: --nthreads 5
[2025-10-16 10:15:24] Threads: 5
[2025-10-16 10:15:24] Checking for CVMFS
[2025-10-16 10:15:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 10:16:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 10:16:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 10:16:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 10:16:09] 2.13.1.0 31290 0 31860 151780 3 1 2660890 6144001 0 130560 0 0 0.000 1291 47 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-16 10:16:09] CVMFS is ok
[2025-10-16 10:16:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 10:16:09] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-16 10:16:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-16 10:16:09] Further information can be found at the LHC@home message board.
[2025-10-16 10:16:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 10:16:09] Checking for apptainer binary...
[2025-10-16 10:16:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 10:16:09] Running /usr/bin/apptainer --version
[2025-10-16 10:16:09] apptainer version 1.4.2
[2025-10-16 10:16:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 10:16:09] riotskates
[2025-10-16 10:16:09] apptainer works
[2025-10-16 10:16:09] Set ATHENA_PROC_NUMBER=5
[2025-10-16 10:16:09] Set ATHENA_CORE_NUMBER=5
[2025-10-16 10:16:09] Starting ATLAS job with PandaID=6846784282
[2025-10-16 10:16:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 11:25:40]  *** The last 200 lines of the pilot log: ***
[2025-10-16 11:25:40]  scope=mc23_13p6TeV
[2025-10-16 11:25:40]  status=None
[2025-10-16 11:25:40]  status_code=0
[2025-10-16 11:25:40]  storage_token=
[2025-10-16 11:25:40]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6846784282/log.46771637._007740.job.log.tgz.1
[2025-10-16 11:25:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/12/log.46771637._007740.job.log.tgz.1
[2025-10-16 11:25:40]  workdir=None
[2025-10-16 11:25:40] ]
[2025-10-16 11:25:40] 2025-10-16 16:24:26,357 | INFO     | transferring file log.46771637._007740.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6846784282/log.46771637._007740.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-16 11:25:40] 2025-10-16 16:24:26,357 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6846784282/log.46771637._007740.job.log.tgz.1 /var/lib/boinc/slots/0/log.46771637._007740.job
[2025-10-16 11:25:40] 2025-10-16 16:24:26,381 | INFO     | adding to output.list: log.46771637._007740.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/12/log.46771637._007740.job.log.tg
[2025-10-16 11:25:40] 2025-10-16 16:24:26,381 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-16 11:25:40] 2025-10-16 16:24:26,381 | INFO     | summary of transferred files:
[2025-10-16 11:25:40] 2025-10-16 16:24:26,381 | INFO     |  -- lfn=log.46771637._007740.job.log.tgz.1, status_code=0, status=transferred
[2025-10-16 11:25:40] 2025-10-16 16:24:26,381 | INFO     | stage-out finished correctly
[2025-10-16 11:25:40] 2025-10-16 16:24:27,696 | INFO     | time since job start (3959s) is within the limit (172800.0s)
[2025-10-16 11:25:40] 2025-10-16 16:24:28,551 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-16 11:25:40] 2025-10-16 16:24:28,627 | INFO     | job 6846784282 has state=finished
[2025-10-16 11:25:40] 2025-10-16 16:24:28,627 | INFO     | preparing for final server update for job 6846784282 in state='finished'
[2025-10-16 11:25:40] 2025-10-16 16:24:28,628 | INFO     | this job has now completed (state=finished)
[2025-10-16 11:25:40] 2025-10-16 16:24:28,628 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-16 11:25:40] 2025-10-16 16:24:28,628 | INFO     | log transfer has been attempted: DONE
[2025-10-16 11:25:40] 2025-10-16 16:24:28,628 | INFO     | job 6846784282 has finished - writing final server update
[2025-10-16 11:25:40] 2025-10-16 16:24:28,629 | INFO     | total number of processed events: 400 (read)
[2025-10-16 11:25:40] 2025-10-16 16:24:28,631 | INFO     | executing command: lscpu
[2025-10-16 11:25:40] 2025-10-16 16:24:28,666 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-16 11:25:40] 2025-10-16 16:24:29,273 | WARNING  | process 41828 can no longer be monitored (due to stat problems) - aborting
[2025-10-16 11:25:40] 2025-10-16 16:24:29,273 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6846784282/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 11:25:40] 2025-10-16 16:24:29,315 | INFO     | number of running child processes to parent process 41828: 1
[2025-10-16 11:25:40] 2025-10-16 16:24:29,315 | INFO     | maximum number of monitored processes: 6
[2025-10-16 11:25:40] 2025-10-16 16:24:29,700 | INFO     | time since job start (3961s) is within the limit (172800.0s)
[2025-10-16 11:25:40] 2025-10-16 16:24:30,794 | INFO     | PID=35399 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-16 11:25:40] 2025-10-16 16:24:31,795 | INFO     | time since job start (3963s) is within the limit (172800.0s)
[2025-10-16 11:25:40] 2025-10-16 16:24:31,816 | INFO     | monitor loop #295: job 0:6846784282 is in state 'finished'
[2025-10-16 11:25:40] 2025-10-16 16:24:31,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 11:25:40] 2025-10-16 16:24:33,800 | INFO     | time since job start (3965s) is within the limit (172800.0s)
[2025-10-16 11:25:40] 2025-10-16 16:24:34,001 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-16 11:25:40] 2025-10-16 16:24:34,002 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 2131.0703333333336
[2025-10-16 11:25:40] 2025-10-16 16:24:34,003 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6846784282/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 11:25:40] 2025-10-16 16:24:34,003 | INFO     | extracted standard info from prmon json
[2025-10-16 11:25:40] 2025-10-16 16:24:34,003 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 11:25:40] 2025-10-16 16:24:34,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 11:25:40] 2025-10-16 16:24:34,003 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 11:25:40] 2025-10-16 16:24:34,003 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | fitting pss+swap vs Time
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | sum of square deviations: 60482994.5
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | sum of deviations: -3262125517.5
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | mean x: 1760629982.5
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | mean y: 2473689.775862069
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | -- intersect: 94961330146.34282
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | intersect: 94961330146.34282
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | chi2: 0.01759790142075506
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | -- intersect: 94961330146.34282
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | current memory leak: -53.93 B/s (using 58 data points, chi2=0.02)
[2025-10-16 11:25:40] 2025-10-16 16:24:34,004 | INFO     | could have reported an average CPU frequency of 2913 MHz (6 samples)
[2025-10-16 11:25:40] 2025-10-16 16:24:34,005 | INFO     | ..............................
[2025-10-16 11:25:40] 2025-10-16 16:24:34,005 | INFO     | . Timing measurements:
[2025-10-16 11:25:40] 2025-10-16 16:24:34,005 | INFO     | . get job = 0 s
[2025-10-16 11:25:40] 2025-10-16 16:24:34,005 | INFO     | . initial setup = 7 s
[2025-10-16 11:25:40] 2025-10-16 16:24:34,005 | INFO     | . payload setup = 9 s
[2025-10-16 11:25:40] 2025-10-16 16:24:34,005 | INFO     | . stage-in = 0 s
[2025-10-16 11:25:40] 2025-10-16 16:24:34,005 | INFO     | . payload execution = 3927 s
[2025-10-16 11:25:40] 2025-10-16 16:24:34,005 | INFO     | . stage-out = 0 s
[2025-10-16 11:25:40] 2025-10-16 16:24:34,005 | INFO     | . log creation = 0 s
[2025-10-16 11:25:40] 2025-10-16 16:24:34,005 | INFO     | ..............................
[2025-10-16 11:25:40] 2025-10-16 16:24:34,046 | INFO     | 
[2025-10-16 11:25:40] 2025-10-16 16:24:34,046 | INFO     | job summary report
[2025-10-16 11:25:40] 2025-10-16 16:24:34,046 | INFO     | --------------------------------------------------
[2025-10-16 11:25:40] 2025-10-16 16:24:34,046 | INFO     | PanDA job id: 6846784282
[2025-10-16 11:25:40] 2025-10-16 16:24:34,046 | INFO     | task id: 46771637
[2025-10-16 11:25:40] 2025-10-16 16:24:34,046 | INFO     | errors: (none)
[2025-10-16 11:25:40] 2025-10-16 16:24:34,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | pilot state: finished 
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | transexitcode: 0
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | exeerrorcode: 0
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | exeerrordiag: 
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | exitcode: 0
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | exitmsg: OK
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | cpuconsumptiontime: 18861 s
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | nevents: 400
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | neventsw: 0
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | pid: 41828
[2025-10-16 11:25:40] 2025-10-16 16:24:34,047 | INFO     | pgrp: 41828
[2025-10-16 11:25:40] 2025-10-16 16:24:34,048 | INFO     | corecount: 5
[2025-10-16 11:25:40] 2025-10-16 16:24:34,048 | INFO     | event service: False
[2025-10-16 11:25:40] 2025-10-16 16:24:34,048 | INFO     | sizes: {0: 2348949, 6: 2349211, 11: 2349239, 3941: 2384180, 3944: 2384180, 3949: 2384374}
[2025-10-16 11:25:40] 2025-10-16 16:24:34,048 | INFO     | --------------------------------------------------
[2025-10-16 11:25:40] 2025-10-16 16:24:34,048 | INFO     | 
[2025-10-16 11:25:40] 2025-10-16 16:24:34,048 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-16 11:25:40] 2025-10-16 16:24:34,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,078 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,078 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,079 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,080 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,080 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,080 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 11:25:40] 2025-10-16 16:24:34,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,080 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 11:25:40] 2025-10-16 16:24:34,081 | INFO     | job 6846784282 has completed (purged errors)
[2025-10-16 11:25:40] 2025-10-16 16:24:34,081 | INFO     | overall cleanup function is called
[2025-10-16 11:25:40] 2025-10-16 16:24:35,089 | INFO     | --- collectZombieJob: --- 10, [41828]
[2025-10-16 11:25:40] 2025-10-16 16:24:35,090 | INFO     | zombie collector waiting for pid 41828
[2025-10-16 11:25:40] 2025-10-16 16:24:35,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 11:25:40] 2025-10-16 16:24:35,090 | INFO     | collected zombie processes
[2025-10-16 11:25:40] 2025-10-16 16:24:35,090 | INFO     | will attempt to kill all subprocesses of pid=41828
[2025-10-16 11:25:40] 2025-10-16 16:24:35,168 | INFO     | process IDs to be killed: [41828] (in reverse order)
[2025-10-16 11:25:40] 2025-10-16 16:24:35,227 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 11:25:40] 2025-10-16 16:24:35,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 11:25:40] 2025-10-16 16:24:35,231 | INFO     | did not find any defunct processes belonging to 41828
[2025-10-16 11:25:40] 2025-10-16 16:24:35,232 | INFO     | did not find any defunct processes belonging to 41828
[2025-10-16 11:25:40] 2025-10-16 16:24:35,232 | INFO     | ready for new job
[2025-10-16 11:25:40] 2025-10-16 16:24:35,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 11:25:40] 2025-10-16 16:24:35,233 | INFO     | ***************************************
[2025-10-16 11:25:40] 2025-10-16 16:24:35,233 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 11:25:40] 2025-10-16 16:24:35,233 | INFO     | ***************************************
[2025-10-16 11:25:40] 2025-10-16 16:24:35,233 | INFO     | 
[2025-10-16 11:25:40] 2025-10-16 16:24:35,234 | INFO     | architecture information:
[2025-10-16 11:25:40] 2025-10-16 16:24:35,234 | INFO     | executing command: cat /etc/os-release
[2025-10-16 11:25:40] 2025-10-16 16:24:35,250 | INFO     | cat /etc/os-release:
[2025-10-16 11:25:40] NAME="CentOS Linux"
[2025-10-16 11:25:40] VERSION="7 (Core)"
[2025-10-16 11:25:40] ID="centos"
[2025-10-16 11:25:40] ID_LIKE="rhel fedora"
[2025-10-16 11:25:40] VERSION_ID="7"
[2025-10-16 11:25:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 11:25:40] ANSI_COLOR="0;31"
[2025-10-16 11:25:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 11:25:40] HOME_URL="https://www.centos.org/"
[2025-10-16 11:25:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 11:25:40] 
[2025-10-16 11:25:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 11:25:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 11:25:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 11:25:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 11:25:40] 
[2025-10-16 11:25:40] 2025-10-16 16:24:35,250 | INFO     | ***************************************
[2025-10-16 11:25:40] 2025-10-16 16:24:35,754 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-16 11:25:40] 2025-10-16 16:24:35,778 | INFO     | sufficient remaining disk space (509578575872 B)
[2025-10-16 11:25:40] 2025-10-16 16:24:35,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 11:25:40] 2025-10-16 16:24:35,778 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 11:25:40] 2025-10-16 16:24:35,779 | INFO     | update_server=False
[2025-10-16 11:25:40] 2025-10-16 16:24:35,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 11:25:40] 2025-10-16 16:24:35,779 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-16 11:25:40] 2025-10-16 16:24:35,779 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 11:25:40] 2025-10-16 16:24:35,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 11:25:40] 2025-10-16 16:24:35,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 11:25:40] 2025-10-16 16:24:35,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 11:25:40] 2025-10-16 16:24:35,780 | INFO     | aborting loop
[2025-10-16 11:25:40] 2025-10-16 16:24:35,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 11:25:40] 2025-10-16 16:24:36,024 | INFO     | all data control threads have been joined
[2025-10-16 11:25:40] 2025-10-16 16:24:36,670 | INFO     | all job control threads have been joined
[2025-10-16 11:25:40] 2025-10-16 16:24:36,784 | INFO     | [job] queue monitor thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:36,784 | INFO     | [job] retrieve thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:36,787 | INFO     | [job] job monitor thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:36,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 11:25:40] 2025-10-16 16:24:37,030 | INFO     | [data] control thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:37,038 | INFO     | all payload control threads have been joined
[2025-10-16 11:25:40] 2025-10-16 16:24:37,143 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:37,536 | INFO     | [job] validate thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:37,676 | INFO     | [job] control thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:37,835 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:37,903 | INFO     | [payload] validate_post thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:38,037 | INFO     | [payload] failed_post thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:38,043 | INFO     | [payload] control thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:38,090 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:38,200 | INFO     | [data] copytool_in thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:38,938 | INFO     | [data] copytool_out thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:39,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 11:25:40] 2025-10-16 16:24:43,145 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:24:46,717 | INFO     | job.realtimelogging is not enabled
[2025-10-16 11:25:40] 2025-10-16 16:24:47,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 11:25:40] 2025-10-16 16:25:33,421 | INFO     | [monitor] cgroup control has ended
[2025-10-16 11:25:40] 2025-10-16 16:25:35,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832632817472)>', '<ExcThread(monitor, started 139831837447936)>']
[2025-10-16 11:25:40] 2025-10-16 16:25:36,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 11:25:40] 2025-10-16 16:25:36,084 | INFO     | [monitor] control thread has ended
[2025-10-16 11:25:40] 2025-10-16 16:25:40,338 | INFO     | all workflow threads have been joined
[2025-10-16 11:25:40] 2025-10-16 16:25:40,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 11:25:40] 2025-10-16 16:25:40,339 | INFO     | traces error code: 0
[2025-10-16 11:25:40] 2025-10-16 16:25:40,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 11:25:40] 2025-10-16 16:25:40,451 [wrapper] ==== pilot stdout END ====
[2025-10-16 11:25:40] 2025-10-16 16:25:40,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 11:25:40] 2025-10-16 16:25:40,458 [wrapper] pilotpid: 35399
[2025-10-16 11:25:40] 2025-10-16 16:25:40,462 [wrapper] Pilot exit status: 0
[2025-10-16 11:25:40] 2025-10-16 16:25:40,488 [wrapper] pandaids: 6846784282
[2025-10-16 11:25:40] 2025-10-16 16:25:40,534 [wrapper] cleanup supervisor_pilot   53752 35400
[2025-10-16 11:25:40] 2025-10-16 16:25:40,539 [wrapper] Test setup, not cleaning
[2025-10-16 11:25:40] 2025-10-16 16:25:40,544 [wrapper] apfmon messages muted
[2025-10-16 11:25:40] 2025-10-16 16:25:40,548 [wrapper] ==== wrapper stdout END ====
[2025-10-16 11:25:40] 2025-10-16 16:25:40,553 [wrapper] ==== wrapper stderr END ====
[2025-10-16 11:25:40]  *** Error codes and diagnostics ***
[2025-10-16 11:25:40]     "exeErrorCode": 0,
[2025-10-16 11:25:40]     "exeErrorDiag": "",
[2025-10-16 11:25:40]     "pilotErrorCode": 0,
[2025-10-16 11:25:40]     "pilotErrorDiag": "",
[2025-10-16 11:25:40]  *** Listing of results directory ***
[2025-10-16 11:25:40] total 426944
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc    557409 Oct 16 02:01 pilot3.tar.gz
[2025-10-16 11:25:40] -rwx------ 1 boinc boinc     36292 Oct 16 02:15 runpilot2-wrapper.sh
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc      5112 Oct 16 02:15 queuedata.json
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc       100 Oct 16 10:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 11:25:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 10:15 run_atlas
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc       105 Oct 16 10:15 job.xml
[2025-10-16 11:25:40] -rw-r--r-- 2 boinc boinc     15120 Oct 16 10:15 start_atlas.sh
[2025-10-16 11:25:40] drwxrwx--x 2 boinc boinc        68 Oct 16 10:15 shared
[2025-10-16 11:25:40] -rw-r--r-- 2 boinc boinc    569677 Oct 16 10:15 input.tar.gz
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc      6350 Oct 16 10:15 init_data.xml
[2025-10-16 11:25:40] -rw-r--r-- 2 boinc boinc 227762015 Oct 16 10:15 EVNT.46771634._000340.pool.root.1
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc         0 Oct 16 10:15 boinc_setup_complete
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc         0 Oct 16 10:15 boinc_lockfile
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc      2553 Oct 16 10:16 pandaJob.out
[2025-10-16 11:25:40] -rw------- 1 boinc boinc    976761 Oct 16 10:18 agis_schedconf.cvmfs.json
[2025-10-16 11:25:40] -rw------- 1 boinc boinc   1560740 Oct 16 10:18 agis_ddmendpoints.agis.ALL.json
[2025-10-16 11:25:40] drwx------ 5 boinc boinc      4096 Oct 16 10:18 pilot3
[2025-10-16 11:25:40] -rw------- 1 boinc boinc        95 Oct 16 11:23 pilot_heartbeat.json
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc       529 Oct 16 11:24 boinc_task_state.xml
[2025-10-16 11:25:40] -rw------- 1 boinc boinc 203833945 Oct 16 11:24 HITS.46771637._007740.pool.root.1
[2025-10-16 11:25:40] -rw------- 1 boinc boinc      1022 Oct 16 11:24 memory_monitor_summary.json
[2025-10-16 11:25:40] -rw------- 1 boinc boinc    271276 Oct 16 11:24 log.46771637._007740.job.log.tgz.1
[2025-10-16 11:25:40] -rw------- 1 boinc boinc      7771 Oct 16 11:24 heartbeat.json
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc        27 Oct 16 11:25 wrapper_checkpoint.txt
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc      8192 Oct 16 11:25 boinc_mmap_file
[2025-10-16 11:25:40] -rw------- 1 boinc boinc      4625 Oct 16 11:25 pilotlog.txt
[2025-10-16 11:25:40] -rw------- 1 boinc boinc    578980 Oct 16 11:25 log.46771637._007740.job.log.1
[2025-10-16 11:25:40] -rw------- 1 boinc boinc       357 Oct 16 11:25 output.list
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc       620 Oct 16 11:25 runtime_log
[2025-10-16 11:25:40] -rw------- 1 boinc boinc    870400 Oct 16 11:25 result.tar.gz
[2025-10-16 11:25:40] -rw------- 1 boinc boinc       646 Oct 16 11:25 Xk6KDmIOXT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdvXMDmTHbhbm.diag
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc      8672 Oct 16 11:25 runtime_log.err
[2025-10-16 11:25:40] -rw-r--r-- 1 boinc boinc     21942 Oct 16 11:25 stderr.txt
[2025-10-16 11:25:40] HITS file was successfully produced:
[2025-10-16 11:25:40] -rw------- 1 boinc boinc 203833945 Oct 16 11:24 shared/HITS.pool.root.1
[2025-10-16 11:25:40]  *** Contents of shared directory: ***
[2025-10-16 11:25:40] total 422912
[2025-10-16 11:25:40] -rw-r--r-- 2 boinc boinc     15120 Oct 16 10:15 start_atlas.sh
[2025-10-16 11:25:40] -rw-r--r-- 2 boinc boinc    569677 Oct 16 10:15 input.tar.gz
[2025-10-16 11:25:40] -rw-r--r-- 2 boinc boinc 227762015 Oct 16 10:15 ATLAS.root_0
[2025-10-16 11:25:40] -rw------- 1 boinc boinc 203833945 Oct 16 11:24 HITS.pool.root.1
[2025-10-16 11:25:40] -rw------- 1 boinc boinc    870400 Oct 16 11:25 result.tar.gz
11:25:42 (31072): run_atlas exited; CPU time 18883.799732
11:25:42 (31072): called boinc_finish(0)

</stderr_txt>
]]>

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