Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:58:15 (551127): wrapper (7.7.26015): starting
10:58:15 (551127): wrapper: running run_atlas (--nthreads 8)
[2025-10-16 10:58:15] Arguments: --nthreads 8
[2025-10-16 10:58:15] Threads: 8
[2025-10-16 10:58:15] Checking for CVMFS
[2025-10-16 10:58:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 10:58:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 10:58:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 10:58:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 10:58:17] 2.13.2.0 2038924 74478 204896 151778 3 794 31093300 32503808 71799 16776704 0 542484309 99.763 347088697 34114 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-16 10:58:17] CVMFS is ok
[2025-10-16 10:58:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 10:58:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 10:58:17] Further information can be found at the LHC@home message board.
[2025-10-16 10:58:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 10:58:17] Checking for apptainer binary...
[2025-10-16 10:58:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 10:58:17] Running /usr/bin/apptainer --version
[2025-10-16 10:58:18] apptainer version 1.4.3-1.el9
[2025-10-16 10:58:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 10:58:18] c8-7-1.aglt2.org
[2025-10-16 10:58:18] apptainer works
[2025-10-16 10:58:18] Set ATHENA_PROC_NUMBER=8
[2025-10-16 10:58:18] Set ATHENA_CORE_NUMBER=8
[2025-10-16 10:58:18] Starting ATLAS job with PandaID=6846998158
[2025-10-16 10:58:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 13:53:10]  *** The last 200 lines of the pilot log: ***
[2025-10-16 13:53:10] 2025-10-16 17:52:07,952 | INFO     | .. there are 84 such processes running
[2025-10-16 13:53:10] 2025-10-16 17:52:08,017 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-16 13:53:10] 2025-10-16 17:52:08,025 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.108203125001
[2025-10-16 13:53:10] 2025-10-16 17:52:08,048 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6846998158/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 13:53:10] 2025-10-16 17:52:08,049 | INFO     | extracted standard info from prmon json
[2025-10-16 13:53:10] 2025-10-16 17:52:08,049 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 13:53:10] 2025-10-16 17:52:08,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 13:53:10] 2025-10-16 17:52:08,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 13:53:10] 2025-10-16 17:52:08,049 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 13:53:10] 2025-10-16 17:52:08,055 | INFO     | fitting pss+swap vs Time
[2025-10-16 13:53:10] 2025-10-16 17:52:08,055 | INFO     | sum of square deviations: 1444133643.9760475
[2025-10-16 13:53:10] 2025-10-16 17:52:08,056 | INFO     | sum of deviations: 49782836729.1976
[2025-10-16 13:53:10] 2025-10-16 17:52:08,056 | INFO     | mean x: 1760632020.011976
[2025-10-16 13:53:10] 2025-10-16 17:52:08,056 | INFO     | mean y: 2069669.4011976048
[2025-10-16 13:53:10] 2025-10-16 17:52:08,056 | INFO     | -- intersect: -60691244109.46352
[2025-10-16 13:53:10] 2025-10-16 17:52:08,056 | INFO     | intersect: -60691244109.46352
[2025-10-16 13:53:10] 2025-10-16 17:52:08,056 | INFO     | chi2: 4.530024119120295
[2025-10-16 13:53:10] 2025-10-16 17:52:08,056 | INFO     | sum of square deviations: 1318262126.4753134
[2025-10-16 13:53:10] 2025-10-16 17:52:08,057 | INFO     | sum of deviations: 57840431500.3827
[2025-10-16 13:53:10] 2025-10-16 17:52:08,057 | INFO     | mean x: 1760631867.5123458
[2025-10-16 13:53:10] 2025-10-16 17:52:08,057 | INFO     | mean y: 2079168.3086419753
[2025-10-16 13:53:10] 2025-10-16 17:52:08,057 | INFO     | -- intersect: -77247888713.66383
[2025-10-16 13:53:10] 2025-10-16 17:52:08,057 | INFO     | intersect: -77247888713.66383
[2025-10-16 13:53:10] 2025-10-16 17:52:08,057 | INFO     | chi2: 3.791347420553595
[2025-10-16 13:53:10] 2025-10-16 17:52:08,057 | INFO     | current chi2=3.791347420553595 (change=16.306242067208835 %)
[2025-10-16 13:53:10] 2025-10-16 17:52:08,057 | INFO     | right removable region: 161
[2025-10-16 13:53:10] 2025-10-16 17:52:08,057 | INFO     | sum of square deviations: 1318260906.4753134
[2025-10-16 13:53:10] 2025-10-16 17:52:08,057 | INFO     | sum of deviations: 8289892898.814827
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | mean x: 1760632172.5123458
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | mean y: 2119748.592592593
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | -- intersect: -11069627940.079641
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | intersect: -11069627940.079641
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | chi2: 1.0723430929479902
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | current chi2=1.0723430929479902 (change=76.32809307964052 %)
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | sum of square deviations: 1199932830.9936268
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | sum of deviations: -1093861780.1082811
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | mean x: 1760632325.0063694
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | mean y: 2131693.108280255
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | -- intersect: 1607128539.1008022
[2025-10-16 13:53:10] 2025-10-16 17:52:08,058 | INFO     | intersect: 1607128539.1008022
[2025-10-16 13:53:10] 2025-10-16 17:52:08,059 | INFO     | chi2: 0.8381984144272703
[2025-10-16 13:53:10] 2025-10-16 17:52:08,059 | INFO     | current chi2=0.8381984144272703 (change=21.834866104003172 %)
[2025-10-16 13:53:10] 2025-10-16 17:52:08,065 | INFO     | left removable region: 20
[2025-10-16 13:53:10] 2025-10-16 17:52:08,065 | INFO     | sum of square deviations: 869180338.9929086
[2025-10-16 13:53:10] 2025-10-16 17:52:08,065 | INFO     | sum of deviations: 5967477749.97163
[2025-10-16 13:53:10] 2025-10-16 17:52:08,065 | INFO     | mean x: 1760632447.0070922
[2025-10-16 13:53:10] 2025-10-16 17:52:08,065 | INFO     | mean y: 2146612.0283687944
[2025-10-16 13:53:10] 2025-10-16 17:52:08,065 | INFO     | -- intersect: -12085718796.393679
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | intersect: -12085718796.393679
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | chi2: 0.04174329786640521
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | -- intersect: -12085718796.393679
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | current memory leak: 6.87 B/s (using 141 data points, chi2=0.04)
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | could have reported an average CPU frequency of 3795 MHz (9 samples)
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | ..............................
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | . Timing measurements:
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | . get job = 0 s
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | . initial setup = 6 s
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | . payload setup = 47 s
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | . stage-in = 0 s
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | . payload execution = 10175 s
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | . stage-out = 1 s
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | . log creation = 0 s
[2025-10-16 13:53:10] 2025-10-16 17:52:08,066 | INFO     | ..............................
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | 
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | job summary report
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | --------------------------------------------------
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | PanDA job id: 6846998158
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | task id: 46776533
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | errors: (none)
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | pilot state: finished 
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | transexitcode: 0
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | exeerrorcode: 0
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | exeerrordiag: 
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | exitcode: 0
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | exitmsg: OK
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | cpuconsumptiontime: 25064 s
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | nevents: 400
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | neventsw: 0
[2025-10-16 13:53:10] 2025-10-16 17:52:08,309 | INFO     | pid: 598305
[2025-10-16 13:53:10] 2025-10-16 17:52:08,310 | INFO     | pgrp: 598305
[2025-10-16 13:53:10] 2025-10-16 17:52:08,310 | INFO     | corecount: 8
[2025-10-16 13:53:10] 2025-10-16 17:52:08,310 | INFO     | event service: False
[2025-10-16 13:53:10] 2025-10-16 17:52:08,310 | INFO     | sizes: {0: 2348703, 1: 2348787, 2: 2348986, 13: 2348986, 24: 2349042, 35: 2349070, 37: 2349488, 45: 2349516, 10227: 2378080, 10228: 2378079, 10230: 2387469, 10261:
[2025-10-16 13:53:10] 2025-10-16 17:52:08,310 | INFO     | --------------------------------------------------
[2025-10-16 13:53:10] 2025-10-16 17:52:08,310 | INFO     | 
[2025-10-16 13:53:10] 2025-10-16 17:52:08,310 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-16 13:53:10] 2025-10-16 17:52:08,337 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,337 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,337 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,337 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,338 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,338 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,338 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,338 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,338 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,338 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,339 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,339 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,339 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,339 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,339 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 13:53:10] 2025-10-16 17:52:08,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,339 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 13:53:10] 2025-10-16 17:52:08,339 | INFO     | job 6846998158 has completed (purged errors)
[2025-10-16 13:53:10] 2025-10-16 17:52:08,339 | INFO     | overall cleanup function is called
[2025-10-16 13:53:10] 2025-10-16 17:52:09,348 | INFO     | --- collectZombieJob: --- 10, [598305]
[2025-10-16 13:53:10] 2025-10-16 17:52:09,348 | INFO     | zombie collector waiting for pid 598305
[2025-10-16 13:53:10] 2025-10-16 17:52:09,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 13:53:10] 2025-10-16 17:52:09,348 | INFO     | collected zombie processes
[2025-10-16 13:53:10] 2025-10-16 17:52:09,348 | INFO     | will attempt to kill all subprocesses of pid=598305
[2025-10-16 13:53:10] 2025-10-16 17:52:10,969 | INFO     | process IDs to be killed: [598305] (in reverse order)
[2025-10-16 13:53:10] 2025-10-16 17:52:11,309 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 13:53:10] 2025-10-16 17:52:11,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 13:53:10] 2025-10-16 17:52:11,344 | INFO     | did not find any defunct processes belonging to 598305
[2025-10-16 13:53:10] 2025-10-16 17:52:11,376 | INFO     | did not find any defunct processes belonging to 598305
[2025-10-16 13:53:10] 2025-10-16 17:52:11,377 | INFO     | ready for new job
[2025-10-16 13:53:10] 2025-10-16 17:52:11,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 13:53:10] 2025-10-16 17:52:11,378 | INFO     | ***************************************
[2025-10-16 13:53:10] 2025-10-16 17:52:11,378 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 13:53:10] 2025-10-16 17:52:11,378 | INFO     | ***************************************
[2025-10-16 13:53:10] 2025-10-16 17:52:11,378 | INFO     | 
[2025-10-16 13:53:10] 2025-10-16 17:52:11,382 | INFO     | architecture information:
[2025-10-16 13:53:10] 2025-10-16 17:52:11,383 | INFO     | executing command: cat /etc/os-release
[2025-10-16 13:53:10] 2025-10-16 17:52:11,478 | INFO     | cat /etc/os-release:
[2025-10-16 13:53:10] NAME="CentOS Linux"
[2025-10-16 13:53:10] VERSION="7 (Core)"
[2025-10-16 13:53:10] ID="centos"
[2025-10-16 13:53:10] ID_LIKE="rhel fedora"
[2025-10-16 13:53:10] VERSION_ID="7"
[2025-10-16 13:53:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 13:53:10] ANSI_COLOR="0;31"
[2025-10-16 13:53:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 13:53:10] HOME_URL="https://www.centos.org/"
[2025-10-16 13:53:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 13:53:10] 
[2025-10-16 13:53:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 13:53:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 13:53:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 13:53:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 13:53:10] 
[2025-10-16 13:53:10] 2025-10-16 17:52:11,478 | INFO     | ***************************************
[2025-10-16 13:53:10] 2025-10-16 17:52:11,982 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-16 13:53:10] 2025-10-16 17:52:12,050 | INFO     | sufficient remaining disk space (92266299392 B)
[2025-10-16 13:53:10] 2025-10-16 17:52:12,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 13:53:10] 2025-10-16 17:52:12,051 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 13:53:10] 2025-10-16 17:52:12,051 | INFO     | update_server=False
[2025-10-16 13:53:10] 2025-10-16 17:52:12,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 13:53:10] 2025-10-16 17:52:12,060 | INFO     | all job control threads have been joined
[2025-10-16 13:53:10] 2025-10-16 17:52:12,204 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-16 13:53:10] 2025-10-16 17:52:12,204 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-16 13:53:10] 2025-10-16 17:52:12,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 13:53:10] 2025-10-16 17:52:12,204 | INFO     | will abort loop
[2025-10-16 13:53:10] 2025-10-16 17:52:12,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 13:53:10] 2025-10-16 17:52:12,554 | INFO     | all data control threads have been joined
[2025-10-16 13:53:10] 2025-10-16 17:52:13,046 | INFO     | all payload control threads have been joined
[2025-10-16 13:53:10] 2025-10-16 17:52:13,065 | INFO     | [job] retrieve thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:13,069 | INFO     | [job] control thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:13,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 13:53:10] 2025-10-16 17:52:13,200 | INFO     | [data] copytool_in thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:13,223 | INFO     | [job] job monitor thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:13,256 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:13,456 | INFO     | [payload] failed_post thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:13,479 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:13,560 | INFO     | [data] control thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:14,051 | INFO     | [payload] control thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:14,060 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:14,155 | INFO     | [job] queue monitor thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:14,263 | INFO     | [job] validate thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:14,307 | INFO     | [data] copytool_out thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:14,405 | INFO     | [payload] validate_post thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:14,560 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:14,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 13:53:10] 2025-10-16 17:52:18,605 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 13:53:10] 2025-10-16 17:52:41,204 | INFO     | PID=568680 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-16 13:53:10] 2025-10-16 17:52:41,218 | INFO     | .. there are 83 such processes running
[2025-10-16 13:53:10] 2025-10-16 17:52:41,218 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 13:53:10] 2025-10-16 17:52:41,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 13:53:10] 2025-10-16 17:52:41,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 13:53:10] 2025-10-16 17:53:01,634 | INFO     | [monitor] cgroup control has ended
[2025-10-16 13:53:10] 2025-10-16 17:53:02,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690032465728)>', '<ExcThread(monitor, started 139689315006208)>']
[2025-10-16 13:53:10] 2025-10-16 17:53:03,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 13:53:10] 2025-10-16 17:53:03,374 | INFO     | [monitor] control thread has ended
[2025-10-16 13:53:10] 2025-10-16 17:53:07,666 | INFO     | all workflow threads have been joined
[2025-10-16 13:53:10] 2025-10-16 17:53:07,666 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 13:53:10] 2025-10-16 17:53:07,666 | INFO     | traces error code: 0
[2025-10-16 13:53:10] 2025-10-16 17:53:07,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 13:53:10] 2025-10-16 17:53:07,921 [wrapper] ==== pilot stdout END ====
[2025-10-16 13:53:10] 2025-10-16 17:53:07,934 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 13:53:10] 2025-10-16 17:53:07,951 [wrapper] pilotpid: 568680
[2025-10-16 13:53:10] 2025-10-16 17:53:07,968 [wrapper] Pilot exit status: 0
[2025-10-16 13:53:10] 2025-10-16 17:53:08,252 [wrapper] pandaids: 6846998158
[2025-10-16 13:53:10] 2025-10-16 17:53:08,810 [wrapper] cleanup supervisor_pilot 2205876 568681
[2025-10-16 13:53:10] 2025-10-16 17:53:08,856 [wrapper] Test setup, not cleaning
[2025-10-16 13:53:10] 2025-10-16 17:53:08,886 [wrapper] apfmon messages muted
[2025-10-16 13:53:10] 2025-10-16 17:53:08,900 [wrapper] ==== wrapper stdout END ====
[2025-10-16 13:53:10] 2025-10-16 17:53:08,920 [wrapper] ==== wrapper stderr END ====
[2025-10-16 13:53:10]  *** Error codes and diagnostics ***
[2025-10-16 13:53:10]     "exeErrorCode": 0,
[2025-10-16 13:53:10]     "exeErrorDiag": "",
[2025-10-16 13:53:10]     "pilotErrorCode": 0,
[2025-10-16 13:53:10]     "pilotErrorDiag": "",
[2025-10-16 13:53:10]  *** Listing of results directory ***
[2025-10-16 13:53:10] total 432580
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 16 03:01 pilot3.tar.gz
[2025-10-16 13:53:10] -rwx------. 1 boincer umatlas     36292 Oct 16 03:04 runpilot2-wrapper.sh
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 16 03:04 queuedata.json
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas       100 Oct 16 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 13:53:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 16 10:58 run_atlas
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas       105 Oct 16 10:58 job.xml
[2025-10-16 13:53:10] -rw-r--r--. 2 boincer umatlas 229095989 Oct 16 10:58 EVNT.46776529._000497.pool.root.1
[2025-10-16 13:53:10] -rw-r--r--. 2 boincer umatlas    569675 Oct 16 10:58 input.tar.gz
[2025-10-16 13:53:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 16 10:58 start_atlas.sh
[2025-10-16 13:53:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 16 10:58 shared
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas         0 Oct 16 10:58 boinc_lockfile
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas      2560 Oct 16 10:58 pandaJob.out
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas    976761 Oct 16 10:59 agis_schedconf.cvmfs.json
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas   1560740 Oct 16 10:59 agis_ddmendpoints.agis.ALL.json
[2025-10-16 13:53:10] drwx------. 5 boincer umatlas      4096 Oct 16 10:59 pilot3
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas      7159 Oct 16 13:47 init_data.xml
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas 206585961 Oct 16 13:50 HITS.46776533._012659.pool.root.1
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas       529 Oct 16 13:50 boinc_task_state.xml
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas      1064 Oct 16 13:51 memory_monitor_summary.json
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas    395218 Oct 16 13:51 log.46776533._012659.job.log.tgz.1
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas      7780 Oct 16 13:52 heartbeat.json
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas        95 Oct 16 13:52 pilot_heartbeat.json
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas      5009 Oct 16 13:53 pilotlog.txt
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 16 13:53 boinc_mmap_file
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas   1297258 Oct 16 13:53 log.46776533._012659.job.log.1
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas        27 Oct 16 13:53 wrapper_checkpoint.txt
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas       357 Oct 16 13:53 output.list
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas       620 Oct 16 13:53 runtime_log
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas   1710080 Oct 16 13:53 result.tar.gz
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas      8694 Oct 16 13:53 runtime_log.err
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas       652 Oct 16 13:53 0ZwKDmNDXT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxtXMDmJmYwEn.diag
[2025-10-16 13:53:10] -rw-r--r--. 1 boincer umatlas     12373 Oct 16 13:53 stderr.txt
[2025-10-16 13:53:10] HITS file was successfully produced:
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas 206585961 Oct 16 13:50 shared/HITS.pool.root.1
[2025-10-16 13:53:10]  *** Contents of shared directory: ***
[2025-10-16 13:53:10] total 427728
[2025-10-16 13:53:10] -rw-r--r--. 2 boincer umatlas 229095989 Oct 16 10:58 ATLAS.root_0
[2025-10-16 13:53:10] -rw-r--r--. 2 boincer umatlas    569675 Oct 16 10:58 input.tar.gz
[2025-10-16 13:53:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 16 10:58 start_atlas.sh
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas 206585961 Oct 16 13:50 HITS.pool.root.1
[2025-10-16 13:53:10] -rw-------. 1 boincer umatlas   1710080 Oct 16 13:53 result.tar.gz
13:53:12 (551127): run_atlas exited; CPU time 25514.617480
13:53:12 (551127): called boinc_finish(0)

</stderr_txt>
]]>

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