Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:24:49 (2868785): wrapper (7.7.26015): starting
17:24:49 (2868785): wrapper: running run_atlas (--nthreads 12)
[2025-10-16 17:24:49] Arguments: --nthreads 12
[2025-10-16 17:24:49] Threads: 12
[2025-10-16 17:24:49] Checking for CVMFS
[2025-10-16 17:24:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 17:24:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 17:24:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 17:24:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 17:24:50] 2.13.2.0 1756961 100724 307072 151793 2 319 25884223 32935937 23792 16776704 0 130760689 99.709 100159713 29451 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-16 17:24:50] CVMFS is ok
[2025-10-16 17:24:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 17:24:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 17:24:51] Further information can be found at the LHC@home message board.
[2025-10-16 17:24:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 17:24:51] Checking for apptainer binary...
[2025-10-16 17:24:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 17:24:51] Running /usr/bin/apptainer --version
[2025-10-16 17:24:51] apptainer version 1.4.3-1.el9
[2025-10-16 17:24:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 17:24:51] c-5-5.aglt2.org
[2025-10-16 17:24:51] apptainer works
[2025-10-16 17:24:51] Set ATHENA_PROC_NUMBER=12
[2025-10-16 17:24:51] Set ATHENA_CORE_NUMBER=12
[2025-10-16 17:24:52] Starting ATLAS job with PandaID=6846997977
[2025-10-16 17:24:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 22:00:29]  *** The last 200 lines of the pilot log: ***
[2025-10-16 22:00:29] 2025-10-17 01:59:50,968 | INFO     | fitting pss+swap vs Time
[2025-10-16 22:00:29] 2025-10-17 01:59:50,969 | INFO     | sum of square deviations: 6035333710.438698
[2025-10-16 22:00:29] 2025-10-17 01:59:50,971 | INFO     | sum of deviations: -108471521482.21925
[2025-10-16 22:00:29] 2025-10-17 01:59:50,972 | INFO     | mean x: 1760658165.6022305
[2025-10-16 22:00:29] 2025-10-17 01:59:50,972 | INFO     | mean y: 2481662.698884758
[2025-10-16 22:00:29] 2025-10-17 01:59:50,972 | INFO     | -- intersect: 31646344155.777996
[2025-10-16 22:00:29] 2025-10-17 01:59:50,972 | INFO     | intersect: 31646344155.777996
[2025-10-16 22:00:29] 2025-10-17 01:59:50,973 | INFO     | chi2: 4.291033755279086
[2025-10-16 22:00:29] 2025-10-17 01:59:50,973 | INFO     | sum of square deviations: 5705032738.590911
[2025-10-16 22:00:29] 2025-10-17 01:59:50,975 | INFO     | sum of deviations: -53881835355.29544
[2025-10-16 22:00:29] 2025-10-17 01:59:50,976 | INFO     | mean x: 1760658013.1136363
[2025-10-16 22:00:29] 2025-10-17 01:59:50,976 | INFO     | mean y: 2506696.109848485
[2025-10-16 22:00:29] 2025-10-17 01:59:50,976 | INFO     | -- intersect: 16631243028.831038
[2025-10-16 22:00:29] 2025-10-17 01:59:50,976 | INFO     | intersect: 16631243028.831038
[2025-10-16 22:00:29] 2025-10-17 01:59:50,977 | INFO     | chi2: 2.0215690096251824
[2025-10-16 22:00:29] 2025-10-17 01:59:50,977 | INFO     | current chi2=2.0215690096251824 (change=52.88853164722539 %)
[2025-10-16 22:00:29] 2025-10-17 01:59:50,977 | INFO     | sum of square deviations: 5386994962.918947
[2025-10-16 22:00:29] 2025-10-17 01:59:50,979 | INFO     | sum of deviations: -52092207509.18918
[2025-10-16 22:00:29] 2025-10-17 01:59:50,980 | INFO     | mean x: 1760657860.6216216
[2025-10-16 22:00:29] 2025-10-17 01:59:50,980 | INFO     | mean y: 2507547.926640927
[2025-10-16 22:00:29] 2025-10-17 01:59:50,980 | INFO     | -- intersect: 17028058018.92428
[2025-10-16 22:00:29] 2025-10-17 01:59:50,980 | INFO     | intersect: 17028058018.92428
[2025-10-16 22:00:29] 2025-10-17 01:59:50,980 | INFO     | time since job start (16463s) is within the limit (172800.0s)
[2025-10-16 22:00:29] 2025-10-17 01:59:50,981 | INFO     | chi2: 2.017584932814273
[2025-10-16 22:00:29] 2025-10-17 01:59:50,981 | INFO     | current chi2=2.017584932814273 (change=0.19707844708441888 %)
[2025-10-16 22:00:29] 2025-10-17 01:59:50,981 | INFO     | right removable region: 258
[2025-10-16 22:00:29] 2025-10-17 01:59:50,982 | INFO     | sum of square deviations: 5704933918.59091
[2025-10-16 22:00:29] 2025-10-17 01:59:50,984 | INFO     | sum of deviations: -148346131821.24997
[2025-10-16 22:00:29] 2025-10-17 01:59:50,984 | INFO     | mean x: 1760658318.1136363
[2025-10-16 22:00:29] 2025-10-17 01:59:50,985 | INFO     | mean y: 2499915.7083333335
[2025-10-16 22:00:29] 2025-10-17 01:59:50,985 | INFO     | -- intersect: 45785125039.53757
[2025-10-16 22:00:29] 2025-10-17 01:59:50,985 | INFO     | intersect: 45785125039.53757
[2025-10-16 22:00:29] 2025-10-17 01:59:50,985 | INFO     | chi2: 2.8693892387760336
[2025-10-16 22:00:29] 2025-10-17 01:59:50,985 | INFO     | current chi2=2.8693892387760336 (change=33.13058338807194 %)
[2025-10-16 22:00:29] 2025-10-17 01:59:50,986 | INFO     | sum of square deviations: 5386813426.671777
[2025-10-16 22:00:29] 2025-10-17 01:59:50,988 | INFO     | sum of deviations: -152780287192.2471
[2025-10-16 22:00:29] 2025-10-17 01:59:50,988 | INFO     | mean x: 1760658470.6254826
[2025-10-16 22:00:29] 2025-10-17 01:59:50,989 | INFO     | mean y: 2502040.976833977
[2025-10-16 22:00:29] 2025-10-17 01:59:50,989 | INFO     | -- intersect: 49938129188.88433
[2025-10-16 22:00:29] 2025-10-17 01:59:50,989 | INFO     | intersect: 49938129188.88433
[2025-10-16 22:00:29] 2025-10-17 01:59:50,989 | INFO     | chi2: 2.8165574712524934
[2025-10-16 22:00:29] 2025-10-17 01:59:50,989 | INFO     | current chi2=2.8165574712524934 (change=1.8412199644993454 %)
[2025-10-16 22:00:29] 2025-10-17 01:59:50,990 | INFO     | left removable region: 20
[2025-10-16 22:00:29] 2025-10-17 01:59:50,990 | INFO     | sum of square deviations: 4179886414.4243574
[2025-10-16 22:00:29] 2025-10-17 01:59:50,992 | INFO     | sum of deviations: -72048040945.40758
[2025-10-16 22:00:29] 2025-10-17 01:59:50,992 | INFO     | mean x: 1760658440.1386554
[2025-10-16 22:00:29] 2025-10-17 01:59:50,992 | INFO     | mean y: 2516443.163865546
[2025-10-16 22:00:29] 2025-10-17 01:59:50,993 | INFO     | -- intersect: 30350707472.52632
[2025-10-16 22:00:29] 2025-10-17 01:59:50,993 | INFO     | intersect: 30350707472.52632
[2025-10-16 22:00:29] 2025-10-17 01:59:50,993 | INFO     | chi2: 0.42863197027763833
[2025-10-16 22:00:29] 2025-10-17 01:59:50,993 | INFO     | -- intersect: 30350707472.52632
[2025-10-16 22:00:29] 2025-10-17 01:59:50,994 | INFO     | current memory leak: -17.24 B/s (using 238 data points, chi2=0.43)
[2025-10-16 22:00:29] 2025-10-17 01:59:50,994 | INFO     | could have reported an average CPU frequency of 2600 MHz (12 samples)
[2025-10-16 22:00:29] 2025-10-17 01:59:50,994 | INFO     | ..............................
[2025-10-16 22:00:29] 2025-10-17 01:59:50,994 | INFO     | . Timing measurements:
[2025-10-16 22:00:29] 2025-10-17 01:59:50,995 | INFO     | . get job = 0 s
[2025-10-16 22:00:29] 2025-10-17 01:59:50,995 | INFO     | . initial setup = 3 s
[2025-10-16 22:00:29] 2025-10-17 01:59:50,995 | INFO     | . payload setup = 11 s
[2025-10-16 22:00:29] 2025-10-17 01:59:50,995 | INFO     | . stage-in = 0 s
[2025-10-16 22:00:29] 2025-10-17 01:59:50,995 | INFO     | . payload execution = 16372 s
[2025-10-16 22:00:29] 2025-10-17 01:59:50,995 | INFO     | . stage-out = 6 s
[2025-10-16 22:00:29] 2025-10-17 01:59:50,995 | INFO     | . log creation = 1 s
[2025-10-16 22:00:29] 2025-10-17 01:59:50,995 | INFO     | ..............................
[2025-10-16 22:00:29] 2025-10-17 01:59:51,380 | INFO     | 
[2025-10-16 22:00:29] 2025-10-17 01:59:51,381 | INFO     | job summary report
[2025-10-16 22:00:29] 2025-10-17 01:59:51,381 | INFO     | --------------------------------------------------
[2025-10-16 22:00:29] 2025-10-17 01:59:51,381 | INFO     | PanDA job id: 6846997977
[2025-10-16 22:00:29] 2025-10-17 01:59:51,381 | INFO     | task id: 46776533
[2025-10-16 22:00:29] 2025-10-17 01:59:51,381 | INFO     | errors: (none)
[2025-10-16 22:00:29] 2025-10-17 01:59:51,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 22:00:29] 2025-10-17 01:59:51,381 | INFO     | pilot state: finished 
[2025-10-16 22:00:29] 2025-10-17 01:59:51,381 | INFO     | transexitcode: 0
[2025-10-16 22:00:29] 2025-10-17 01:59:51,381 | INFO     | exeerrorcode: 0
[2025-10-16 22:00:29] 2025-10-17 01:59:51,381 | INFO     | exeerrordiag: 
[2025-10-16 22:00:29] 2025-10-17 01:59:51,382 | INFO     | exitcode: 0
[2025-10-16 22:00:29] 2025-10-17 01:59:51,382 | INFO     | exitmsg: OK
[2025-10-16 22:00:29] 2025-10-17 01:59:51,382 | INFO     | cpuconsumptiontime: 52562 s
[2025-10-16 22:00:29] 2025-10-17 01:59:51,382 | INFO     | nevents: 400
[2025-10-16 22:00:29] 2025-10-17 01:59:51,382 | INFO     | neventsw: 0
[2025-10-16 22:00:29] 2025-10-17 01:59:51,382 | INFO     | pid: 2886553
[2025-10-16 22:00:29] 2025-10-17 01:59:51,382 | INFO     | pgrp: 2886553
[2025-10-16 22:00:29] 2025-10-17 01:59:51,382 | INFO     | corecount: 12
[2025-10-16 22:00:29] 2025-10-17 01:59:51,382 | INFO     | event service: False
[2025-10-16 22:00:29] 2025-10-17 01:59:51,383 | INFO     | sizes: {0: 2348102, 1: 2348787, 2: 2348986, 3: 2348986, 14: 2349014, 18: 2349304, 25: 2349460, 16388: 2380694, 16395: 2389720, 16398: 2389776, 16425: 2389970}
[2025-10-16 22:00:29] 2025-10-17 01:59:51,383 | INFO     | --------------------------------------------------
[2025-10-16 22:00:29] 2025-10-17 01:59:51,383 | INFO     | 
[2025-10-16 22:00:29] 2025-10-17 01:59:51,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-16 22:00:29] 2025-10-17 01:59:51,469 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,470 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,470 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,470 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,470 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,470 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,470 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,471 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 22:00:29] 2025-10-17 01:59:51,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 22:00:29] 2025-10-17 01:59:51,472 | INFO     | job 6846997977 has completed (purged errors)
[2025-10-16 22:00:29] 2025-10-17 01:59:51,472 | INFO     | overall cleanup function is called
[2025-10-16 22:00:29] 2025-10-17 01:59:52,481 | INFO     | --- collectZombieJob: --- 10, [2886553]
[2025-10-16 22:00:29] 2025-10-17 01:59:52,481 | INFO     | zombie collector waiting for pid 2886553
[2025-10-16 22:00:29] 2025-10-17 01:59:52,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 22:00:29] 2025-10-17 01:59:52,482 | INFO     | collected zombie processes
[2025-10-16 22:00:29] 2025-10-17 01:59:52,482 | INFO     | will attempt to kill all subprocesses of pid=2886553
[2025-10-16 22:00:29] 2025-10-17 01:59:54,274 | INFO     | PID=2874672 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-16 22:00:29] 2025-10-17 01:59:54,274 | INFO     | .. there are 41 such processes running
[2025-10-16 22:00:29] 2025-10-17 01:59:54,287 | INFO     | process IDs to be killed: [2886553] (in reverse order)
[2025-10-16 22:00:29] 2025-10-17 01:59:54,417 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 22:00:29] 2025-10-17 01:59:54,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 22:00:29] 2025-10-17 01:59:54,517 | INFO     | did not find any defunct processes belonging to 2886553
[2025-10-16 22:00:29] 2025-10-17 01:59:54,622 | INFO     | did not find any defunct processes belonging to 2886553
[2025-10-16 22:00:29] 2025-10-17 01:59:54,622 | INFO     | ready for new job
[2025-10-16 22:00:29] 2025-10-17 01:59:54,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 22:00:29] 2025-10-17 01:59:54,628 | INFO     | ***************************************
[2025-10-16 22:00:29] 2025-10-17 01:59:54,629 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 22:00:29] 2025-10-17 01:59:54,629 | INFO     | ***************************************
[2025-10-16 22:00:29] 2025-10-17 01:59:54,630 | INFO     | 
[2025-10-16 22:00:29] 2025-10-17 01:59:54,636 | INFO     | architecture information:
[2025-10-16 22:00:29] 2025-10-17 01:59:54,640 | INFO     | executing command: cat /etc/os-release
[2025-10-16 22:00:29] 2025-10-17 01:59:54,767 | INFO     | cat /etc/os-release:
[2025-10-16 22:00:29] NAME="CentOS Linux"
[2025-10-16 22:00:29] VERSION="7 (Core)"
[2025-10-16 22:00:29] ID="centos"
[2025-10-16 22:00:29] ID_LIKE="rhel fedora"
[2025-10-16 22:00:29] VERSION_ID="7"
[2025-10-16 22:00:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 22:00:29] ANSI_COLOR="0;31"
[2025-10-16 22:00:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 22:00:29] HOME_URL="https://www.centos.org/"
[2025-10-16 22:00:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 22:00:29] 
[2025-10-16 22:00:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 22:00:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 22:00:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 22:00:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 22:00:29] 
[2025-10-16 22:00:29] 2025-10-17 01:59:54,768 | INFO     | ***************************************
[2025-10-16 22:00:29] 2025-10-17 01:59:55,271 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-16 22:00:29] 2025-10-17 01:59:55,321 | INFO     | sufficient remaining disk space (75736547328 B)
[2025-10-16 22:00:29] 2025-10-17 01:59:55,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 22:00:29] 2025-10-17 01:59:55,324 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 22:00:29] 2025-10-17 01:59:55,324 | INFO     | update_server=False
[2025-10-16 22:00:29] 2025-10-17 01:59:55,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 22:00:29] 2025-10-17 01:59:55,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 22:00:29] 2025-10-17 01:59:55,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 22:00:29] 2025-10-17 01:59:55,360 | INFO     | aborting loop
[2025-10-16 22:00:29] 2025-10-17 01:59:55,676 | INFO     | all payload control threads have been joined
[2025-10-16 22:00:29] 2025-10-17 01:59:55,889 | INFO     | all data control threads have been joined
[2025-10-16 22:00:29] 2025-10-17 01:59:56,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 22:00:29] 2025-10-17 01:59:56,364 | INFO     | [job] retrieve thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:56,366 | INFO     | [job] job monitor thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:56,549 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:56,691 | INFO     | [payload] control thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:56,774 | INFO     | all job control threads have been joined
[2025-10-16 22:00:29] 2025-10-17 01:59:56,908 | INFO     | [data] control thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:56,995 | INFO     | [job] validate thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:57,026 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:57,124 | INFO     | [data] copytool_in thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:57,125 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:57,196 | INFO     | [payload] failed_post thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:57,214 | INFO     | [job] queue monitor thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:57,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 22:00:29] 2025-10-17 01:59:57,367 | INFO     | [data] copytool_out thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:57,713 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:57,780 | INFO     | [job] control thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:57,815 | INFO     | [payload] validate_post thread has finished
[2025-10-16 22:00:29] 2025-10-17 01:59:57,905 | INFO     | [monitor] cgroup control has ended
[2025-10-16 22:00:29] 2025-10-17 02:00:01,243 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 22:00:29] 2025-10-17 02:00:01,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461167155008)>', '<ExcThread(monitor, started 140460429391616)>']
[2025-10-16 22:00:29] 2025-10-17 02:00:06,998 | INFO     | all workflow threads have been joined
[2025-10-16 22:00:29] 2025-10-17 02:00:06,998 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 22:00:29] 2025-10-17 02:00:06,999 | INFO     | traces error code: 0
[2025-10-16 22:00:29] 2025-10-17 02:00:06,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 22:00:29] 2025-10-17 02:00:27,819 | INFO     | PID=2874672 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-16 22:00:29] 2025-10-17 02:00:27,820 | INFO     | .. there are 41 such processes running
[2025-10-16 22:00:29] 2025-10-17 02:00:27,820 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 22:00:29] 2025-10-17 02:00:27,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 22:00:29] 2025-10-17 02:00:27,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 22:00:29] 2025-10-17 02:00:27,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 22:00:29] 2025-10-17 02:00:27,820 | INFO     | [monitor] control thread has ended
[2025-10-16 22:00:29] 2025-10-17 02:00:28,295 [wrapper] ==== pilot stdout END ====
[2025-10-16 22:00:29] 2025-10-17 02:00:28,318 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 22:00:29] 2025-10-17 02:00:28,340 [wrapper] pilotpid: 2874672
[2025-10-16 22:00:29] 2025-10-17 02:00:28,356 [wrapper] Pilot exit status: 0
[2025-10-16 22:00:29] 2025-10-17 02:00:28,467 [wrapper] pandaids: 6846997977
[2025-10-16 22:00:29] 2025-10-17 02:00:28,711 [wrapper] cleanup supervisor_pilot 4082036 2874673
[2025-10-16 22:00:29] 2025-10-17 02:00:28,741 [wrapper] Test setup, not cleaning
[2025-10-16 22:00:29] 2025-10-17 02:00:28,794 [wrapper] apfmon messages muted
[2025-10-16 22:00:29] 2025-10-17 02:00:28,863 [wrapper] ==== wrapper stdout END ====
[2025-10-16 22:00:29] 2025-10-17 02:00:28,876 [wrapper] ==== wrapper stderr END ====
[2025-10-16 22:00:29]  *** Error codes and diagnostics ***
[2025-10-16 22:00:29]     "exeErrorCode": 0,
[2025-10-16 22:00:29]     "exeErrorDiag": "",
[2025-10-16 22:00:29]     "pilotErrorCode": 0,
[2025-10-16 22:00:29]     "pilotErrorDiag": "",
[2025-10-16 22:00:29]  *** Listing of results directory ***
[2025-10-16 22:00:29] total 433772
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 16 02:50 pilot3.tar.gz
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 16 02:50 queuedata.json
[2025-10-16 22:00:29] -rwx------. 1 boincer umatlas     36292 Oct 16 02:52 runpilot2-wrapper.sh
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas       100 Oct 16 17:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 22:00:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 16 17:24 run_atlas
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas       105 Oct 16 17:24 job.xml
[2025-10-16 22:00:29] -rw-r--r--. 2 boincer umatlas 226590322 Oct 16 17:24 EVNT.46776529._000492.pool.root.1
[2025-10-16 22:00:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 16 17:24 start_atlas.sh
[2025-10-16 22:00:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 16 17:24 shared
[2025-10-16 22:00:29] -rw-r--r--. 2 boincer umatlas    569682 Oct 16 17:24 input.tar.gz
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas         0 Oct 16 17:24 boinc_lockfile
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas      2560 Oct 16 17:24 pandaJob.out
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas    976734 Oct 16 17:25 agis_schedconf.cvmfs.json
[2025-10-16 22:00:29] drwx------. 5 boincer umatlas      4096 Oct 16 17:25 pilot3
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas      6658 Oct 16 21:54 init_data.xml
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas       530 Oct 16 21:56 boinc_task_state.xml
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas 208652786 Oct 16 21:56 HITS.46776533._012551.pool.root.1
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas      1042 Oct 16 21:59 memory_monitor_summary.json
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas   1560740 Oct 16 21:59 agis_ddmendpoints.agis.ALL.json
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas    551948 Oct 16 21:59 log.46776533._012551.job.log.tgz.1
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas        95 Oct 16 21:59 pilot_heartbeat.json
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas      7828 Oct 16 21:59 heartbeat.json
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas       823 Oct 16 22:00 pilotlog.txt
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas   1971329 Oct 16 22:00 log.46776533._012551.job.log.1
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas       357 Oct 16 22:00 output.list
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 16 22:00 boinc_mmap_file
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas       620 Oct 16 22:00 runtime_log
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas   2539520 Oct 16 22:00 result.tar.gz
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas        28 Oct 16 22:00 wrapper_checkpoint.txt
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas      8691 Oct 16 22:00 runtime_log.err
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas       654 Oct 16 22:00 FDWLDmG2WT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmg6pNDm0stRTm.diag
[2025-10-16 22:00:29] -rw-r--r--. 1 boincer umatlas     21165 Oct 16 22:00 stderr.txt
[2025-10-16 22:00:29] HITS file was successfully produced:
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas 208652786 Oct 16 21:56 shared/HITS.pool.root.1
[2025-10-16 22:00:29]  *** Contents of shared directory: ***
[2025-10-16 22:00:29] total 428104
[2025-10-16 22:00:29] -rw-r--r--. 2 boincer umatlas 226590322 Oct 16 17:24 ATLAS.root_0
[2025-10-16 22:00:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 16 17:24 start_atlas.sh
[2025-10-16 22:00:29] -rw-r--r--. 2 boincer umatlas    569682 Oct 16 17:24 input.tar.gz
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas 208652786 Oct 16 21:56 HITS.pool.root.1
[2025-10-16 22:00:29] -rw-------. 1 boincer umatlas   2539520 Oct 16 22:00 result.tar.gz
22:00:50 (2868785): run_atlas exited; CPU time 53148.221775
22:00:50 (2868785): called boinc_finish(0)

</stderr_txt>
]]>

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