Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:15:56 (17736): wrapper (7.7.26015): starting
01:15:56 (17736): wrapper: running run_atlas (--nthreads 8)
[2025-10-17 01:15:56] Arguments: --nthreads 8
[2025-10-17 01:15:56] Threads: 8
[2025-10-17 01:15:56] Checking for CVMFS
[2025-10-17 01:15:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 01:15:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 01:15:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 01:15:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 01:15:59] 2.11.2.0 16160 226834 137124 151795 0 61 12776909 25165825 4632 130560 0 117411535 99.880 65641608 3204 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-17 01:15:59] CVMFS is ok
[2025-10-17 01:15:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 01:15:59] Checking for apptainer binary...
[2025-10-17 01:15:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 01:15:59] Running /usr/bin/apptainer --version
[2025-10-17 01:15:59] apptainer version 1.3.2-1.el7
[2025-10-17 01:15:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 01:16:09] cg-vwn457.simple-grid.lan
[2025-10-17 01:16:09] apptainer works
[2025-10-17 01:16:09] Set ATHENA_PROC_NUMBER=8
[2025-10-17 01:16:09] Set ATHENA_CORE_NUMBER=8
[2025-10-17 01:16:09] Starting ATLAS job with PandaID=6846960790
[2025-10-17 01:16:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 05:40:39]  *** The last 200 lines of the pilot log: ***
[2025-10-17 05:40:39] 2025-10-17 03:39:47,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 05:40:39] 2025-10-17 03:39:47,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 05:40:39] 2025-10-17 03:39:47,742 | INFO     | fitting pss+swap vs Time
[2025-10-17 05:40:39] 2025-10-17 03:39:47,742 | INFO     | sum of square deviations: 4616114457.5
[2025-10-17 05:40:39] 2025-10-17 03:39:47,744 | INFO     | sum of deviations: 64788235389.49999
[2025-10-17 05:40:39] 2025-10-17 03:39:47,744 | INFO     | mean x: 1760664759.5
[2025-10-17 05:40:39] 2025-10-17 03:39:47,744 | INFO     | mean y: 2462203.3943089433
[2025-10-17 05:40:39] 2025-10-17 03:39:47,746 | INFO     | -- intersect: -24708875422.809555
[2025-10-17 05:40:39] 2025-10-17 03:39:47,746 | INFO     | intersect: -24708875422.809555
[2025-10-17 05:40:39] 2025-10-17 03:39:47,746 | INFO     | chi2: 7.365993370966912
[2025-10-17 05:40:39] 2025-10-17 03:39:47,747 | INFO     | sum of square deviations: 4340323240.0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,748 | INFO     | sum of deviations: 79761305424.0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,749 | INFO     | mean x: 1760664607.0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,749 | INFO     | mean y: 2470333.809128631
[2025-10-17 05:40:39] 2025-10-17 03:39:47,749 | INFO     | -- intersect: -32352932640.314503
[2025-10-17 05:40:39] 2025-10-17 03:39:47,749 | INFO     | intersect: -32352932640.314503
[2025-10-17 05:40:39] 2025-10-17 03:39:47,749 | INFO     | chi2: 6.660999623079089
[2025-10-17 05:40:39] 2025-10-17 03:39:47,750 | INFO     | current chi2=6.660999623079089 (change=9.570925635998506 %)
[2025-10-17 05:40:39] 2025-10-17 03:39:47,750 | INFO     | right removable region: 240
[2025-10-17 05:40:39] 2025-10-17 03:39:47,750 | INFO     | sum of square deviations: 4340323240.0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,752 | INFO     | sum of deviations: -21610705032.999996
[2025-10-17 05:40:39] 2025-10-17 03:39:47,752 | INFO     | mean x: 1760664912.0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,752 | INFO     | mean y: 2509943.5767634856
[2025-10-17 05:40:39] 2025-10-17 03:39:47,752 | INFO     | -- intersect: 8768956120.793945
[2025-10-17 05:40:39] 2025-10-17 03:39:47,752 | INFO     | intersect: 8768956120.793945
[2025-10-17 05:40:39] 2025-10-17 03:39:47,753 | INFO     | chi2: 2.445454376674432
[2025-10-17 05:40:39] 2025-10-17 03:39:47,753 | INFO     | current chi2=2.445454376674432 (change=66.80075241021531 %)
[2025-10-17 05:40:39] 2025-10-17 03:39:47,753 | INFO     | sum of square deviations: 4075741535.0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,758 | INFO     | sum of deviations: -63877568524.500015
[2025-10-17 05:40:39] 2025-10-17 03:39:47,759 | INFO     | mean x: 1760665064.5
[2025-10-17 05:40:39] 2025-10-17 03:39:47,759 | INFO     | mean y: 2534160.4279661016
[2025-10-17 05:40:39] 2025-10-17 03:39:47,759 | INFO     | -- intersect: 27596777401.93224
[2025-10-17 05:40:39] 2025-10-17 03:39:47,759 | INFO     | intersect: 27596777401.93224
[2025-10-17 05:40:39] 2025-10-17 03:39:47,759 | INFO     | chi2: 1.0101881917388629
[2025-10-17 05:40:39] 2025-10-17 03:39:47,759 | INFO     | current chi2=1.0101881917388629 (change=58.69118633435249 %)
[2025-10-17 05:40:39] 2025-10-17 03:39:47,760 | INFO     | sum of square deviations: 3822136780.0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,761 | INFO     | sum of deviations: -63973475316.999985
[2025-10-17 05:40:39] 2025-10-17 03:39:47,762 | INFO     | mean x: 1760665217.0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,762 | INFO     | mean y: 2534186.41991342
[2025-10-17 05:40:39] 2025-10-17 03:39:47,762 | INFO     | -- intersect: 29471880597.735397
[2025-10-17 05:40:39] 2025-10-17 03:39:47,762 | INFO     | intersect: 29471880597.735397
[2025-10-17 05:40:39] 2025-10-17 03:39:47,762 | INFO     | chi2: 0.9891652724858293
[2025-10-17 05:40:39] 2025-10-17 03:39:47,762 | INFO     | current chi2=0.9891652724858293 (change=2.0810893875968075 %)
[2025-10-17 05:40:39] 2025-10-17 03:39:47,762 | INFO     | left removable region: 30
[2025-10-17 05:40:39] 2025-10-17 03:39:47,763 | INFO     | sum of square deviations: 2871616632.5
[2025-10-17 05:40:39] 2025-10-17 03:39:47,764 | INFO     | sum of deviations: -25602259430.999996
[2025-10-17 05:40:39] 2025-10-17 03:39:47,764 | INFO     | mean x: 1760665491.5
[2025-10-17 05:40:39] 2025-10-17 03:39:47,765 | INFO     | mean y: 2529575.2476190478
[2025-10-17 05:40:39] 2025-10-17 03:39:47,765 | INFO     | -- intersect: 15699964314.42049
[2025-10-17 05:40:39] 2025-10-17 03:39:47,765 | INFO     | intersect: 15699964314.42049
[2025-10-17 05:40:39] 2025-10-17 03:39:47,765 | INFO     | chi2: 0.1535555728952851
[2025-10-17 05:40:39] 2025-10-17 03:39:47,765 | INFO     | -- intersect: 15699964314.42049
[2025-10-17 05:40:39] 2025-10-17 03:39:47,765 | INFO     | current memory leak: -8.92 B/s (using 210 data points, chi2=0.15)
[2025-10-17 05:40:39] 2025-10-17 03:39:47,766 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2025-10-17 05:40:39] 2025-10-17 03:39:47,766 | INFO     | ..............................
[2025-10-17 05:40:39] 2025-10-17 03:39:47,766 | INFO     | . Timing measurements:
[2025-10-17 05:40:39] 2025-10-17 03:39:47,766 | INFO     | . get job = 0 s
[2025-10-17 05:40:39] 2025-10-17 03:39:47,766 | INFO     | . initial setup = 7 s
[2025-10-17 05:40:39] 2025-10-17 03:39:47,766 | INFO     | . payload setup = 136 s
[2025-10-17 05:40:39] 2025-10-17 03:39:47,767 | INFO     | . stage-in = 0 s
[2025-10-17 05:40:39] 2025-10-17 03:39:47,767 | INFO     | . payload execution = 15150 s
[2025-10-17 05:40:39] 2025-10-17 03:39:47,767 | INFO     | . stage-out = 4 s
[2025-10-17 05:40:39] 2025-10-17 03:39:47,767 | INFO     | . log creation = 1 s
[2025-10-17 05:40:39] 2025-10-17 03:39:47,767 | INFO     | ..............................
[2025-10-17 05:40:39] 2025-10-17 03:39:47,931 | INFO     | 
[2025-10-17 05:40:39] 2025-10-17 03:39:47,931 | INFO     | job summary report
[2025-10-17 05:40:39] 2025-10-17 03:39:47,931 | INFO     | --------------------------------------------------
[2025-10-17 05:40:39] 2025-10-17 03:39:47,931 | INFO     | PanDA job id: 6846960790
[2025-10-17 05:40:39] 2025-10-17 03:39:47,931 | INFO     | task id: 46776533
[2025-10-17 05:40:39] 2025-10-17 03:39:47,931 | INFO     | errors: (none)
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | pilot state: finished 
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | transexitcode: 0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | exeerrorcode: 0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | exeerrordiag: 
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | exitcode: 0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | exitmsg: OK
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | cpuconsumptiontime: 54685 s
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | nevents: 400
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | neventsw: 0
[2025-10-17 05:40:39] 2025-10-17 03:39:47,932 | INFO     | pid: 28118
[2025-10-17 05:40:39] 2025-10-17 03:39:47,933 | INFO     | pgrp: 28118
[2025-10-17 05:40:39] 2025-10-17 03:39:47,933 | INFO     | corecount: 8
[2025-10-17 05:40:39] 2025-10-17 03:39:47,933 | INFO     | event service: False
[2025-10-17 05:40:39] 2025-10-17 03:39:47,933 | INFO     | sizes: {0: 2348700, 1: 2348784, 2: 2348955, 12: 2348983, 23: 2349011, 34: 2349039, 45: 2349195, 55: 2349223, 66: 2349251, 77: 2349279, 87: 2349335, 91: 2349905, 98
[2025-10-17 05:40:39] 2025-10-17 03:39:47,933 | INFO     | --------------------------------------------------
[2025-10-17 05:40:39] 2025-10-17 03:39:47,933 | INFO     | 
[2025-10-17 05:40:39] 2025-10-17 03:39:47,933 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-10-17 05:40:39] 2025-10-17 03:39:48,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 05:40:39] 2025-10-17 03:39:48,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 05:40:39] 2025-10-17 03:39:48,550 | INFO     | job 6846960790 has completed (purged errors)
[2025-10-17 05:40:39] 2025-10-17 03:39:48,550 | INFO     | overall cleanup function is called
[2025-10-17 05:40:39] 2025-10-17 03:39:49,559 | INFO     | --- collectZombieJob: --- 10, [28118]
[2025-10-17 05:40:39] 2025-10-17 03:39:49,559 | INFO     | zombie collector waiting for pid 28118
[2025-10-17 05:40:39] 2025-10-17 03:39:49,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 05:40:39] 2025-10-17 03:39:49,559 | INFO     | collected zombie processes
[2025-10-17 05:40:39] 2025-10-17 03:39:49,559 | INFO     | will attempt to kill all subprocesses of pid=28118
[2025-10-17 05:40:39] 2025-10-17 03:39:49,679 | INFO     | process IDs to be killed: [28118] (in reverse order)
[2025-10-17 05:40:39] 2025-10-17 03:39:50,534 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 05:40:39] 2025-10-17 03:39:50,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 05:40:39] 2025-10-17 03:39:50,538 | INFO     | did not find any defunct processes belonging to 28118
[2025-10-17 05:40:39] 2025-10-17 03:39:50,540 | INFO     | did not find any defunct processes belonging to 28118
[2025-10-17 05:40:39] 2025-10-17 03:39:50,540 | INFO     | ready for new job
[2025-10-17 05:40:39] 2025-10-17 03:39:50,541 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 05:40:39] 2025-10-17 03:39:50,543 | INFO     | ***************************************
[2025-10-17 05:40:39] 2025-10-17 03:39:50,543 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 05:40:39] 2025-10-17 03:39:50,543 | INFO     | ***************************************
[2025-10-17 05:40:39] 2025-10-17 03:39:50,543 | INFO     | 
[2025-10-17 05:40:39] 2025-10-17 03:39:50,548 | INFO     | pilot is running in a VM
[2025-10-17 05:40:39] 2025-10-17 03:39:50,548 | INFO     | architecture information:
[2025-10-17 05:40:39] 2025-10-17 03:39:50,560 | INFO     | executing command: cat /etc/os-release
[2025-10-17 05:40:39] 2025-10-17 03:39:50,789 | INFO     | cat /etc/os-release:
[2025-10-17 05:40:39] NAME="CentOS Linux"
[2025-10-17 05:40:39] VERSION="7 (Core)"
[2025-10-17 05:40:39] ID="centos"
[2025-10-17 05:40:39] ID_LIKE="rhel fedora"
[2025-10-17 05:40:39] VERSION_ID="7"
[2025-10-17 05:40:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 05:40:39] ANSI_COLOR="0;31"
[2025-10-17 05:40:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 05:40:39] HOME_URL="https://www.centos.org/"
[2025-10-17 05:40:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 05:40:39] 
[2025-10-17 05:40:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 05:40:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 05:40:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 05:40:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 05:40:39] 
[2025-10-17 05:40:39] 2025-10-17 03:39:50,790 | INFO     | ***************************************
[2025-10-17 05:40:39] 2025-10-17 03:39:51,293 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-10-17 05:40:39] 2025-10-17 03:39:51,540 | INFO     | sufficient remaining disk space (495608397824 B)
[2025-10-17 05:40:39] 2025-10-17 03:39:51,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 05:40:39] 2025-10-17 03:39:51,541 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 05:40:39] 2025-10-17 03:39:51,541 | INFO     | update_server=False
[2025-10-17 05:40:39] 2025-10-17 03:39:51,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 05:40:39] 2025-10-17 03:39:51,556 | INFO     | all job control threads have been joined
[2025-10-17 05:40:39] 2025-10-17 03:39:51,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 05:40:39] 2025-10-17 03:39:51,736 | INFO     | all data control threads have been joined
[2025-10-17 05:40:39] 2025-10-17 03:39:52,270 | INFO     | all payload control threads have been joined
[2025-10-17 05:40:39] 2025-10-17 03:39:52,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 05:40:39] 2025-10-17 03:39:52,349 | INFO     | aborting loop
[2025-10-17 05:40:39] 2025-10-17 03:39:52,547 | INFO     | [job] retrieve thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:52,562 | INFO     | [job] control thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:52,742 | INFO     | [data] control thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:52,806 | INFO     | [data] copytool_in thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:52,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 05:40:39] 2025-10-17 03:39:53,203 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:53,221 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:53,276 | INFO     | [payload] control thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:53,355 | INFO     | [job] job monitor thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:53,456 | INFO     | [job] validate thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:53,598 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:53,722 | INFO     | [data] copytool_out thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:53,738 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:53,837 | INFO     | [payload] validate_post thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:53,950 | INFO     | [job] queue monitor thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:53,976 | INFO     | [payload] failed_post thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:39:54,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 05:40:39] 2025-10-17 03:39:58,042 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 05:40:39] 2025-10-17 03:40:19,888 | INFO     | PID=21571 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 05:40:39] 2025-10-17 03:40:19,888 | INFO     | .. there are 9 such processes running
[2025-10-17 05:40:39] 2025-10-17 03:40:19,889 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 05:40:39] 2025-10-17 03:40:19,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 05:40:39] 2025-10-17 03:40:19,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 05:40:39] 2025-10-17 03:40:28,613 | INFO     | [monitor] cgroup control has ended
[2025-10-17 05:40:39] 2025-10-17 03:40:29,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601890568000)>', '<ExcThread(monitor, started 140600854705920)>']
[2025-10-17 05:40:39] 2025-10-17 03:40:29,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 05:40:39] 2025-10-17 03:40:29,948 | INFO     | [monitor] control thread has ended
[2025-10-17 05:40:39] 2025-10-17 03:40:34,333 | INFO     | all workflow threads have been joined
[2025-10-17 05:40:39] 2025-10-17 03:40:34,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 05:40:39] 2025-10-17 03:40:34,333 | INFO     | traces error code: 0
[2025-10-17 05:40:39] 2025-10-17 03:40:34,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 05:40:39] 2025-10-17 03:40:34,753 [wrapper] ==== pilot stdout END ====
[2025-10-17 05:40:39] 2025-10-17 03:40:34,858 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 05:40:39] 2025-10-17 03:40:34,972 [wrapper] pilotpid: 21571
[2025-10-17 05:40:39] 2025-10-17 03:40:34,990 [wrapper] Pilot exit status: 0
[2025-10-17 05:40:39] 2025-10-17 03:40:35,470 [wrapper] pandaids: 6846960790
[2025-10-17 05:40:39] 2025-10-17 03:40:36,286 [wrapper] cleanup supervisor_pilot  3734 21572
[2025-10-17 05:40:39] 2025-10-17 03:40:36,377 [wrapper] Test setup, not cleaning
[2025-10-17 05:40:39] 2025-10-17 03:40:36,476 [wrapper] apfmon messages muted
[2025-10-17 05:40:39] 2025-10-17 03:40:36,546 [wrapper] ==== wrapper stdout END ====
[2025-10-17 05:40:39] 2025-10-17 03:40:36,624 [wrapper] ==== wrapper stderr END ====
[2025-10-17 05:40:39]  *** Error codes and diagnostics ***
[2025-10-17 05:40:39]     "exeErrorCode": 0,
[2025-10-17 05:40:39]     "exeErrorDiag": "",
[2025-10-17 05:40:39]     "pilotErrorCode": 0,
[2025-10-17 05:40:39]     "pilotErrorDiag": "",
[2025-10-17 05:40:39]  *** Listing of results directory ***
[2025-10-17 05:40:39] total 434332
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc    557409 Oct 16 05:35 pilot3.tar.gz
[2025-10-17 05:40:39] -rwx------. 1 boinc boinc     36292 Oct 16 06:14 runpilot2-wrapper.sh
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc      5112 Oct 16 06:14 queuedata.json
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc       100 Oct 17 01:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 05:40:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct 17 01:15 run_atlas
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc       105 Oct 17 01:15 job.xml
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc      6392 Oct 17 01:15 init_data.xml
[2025-10-17 05:40:39] -rw-r--r--. 2 boinc boinc 226842393 Oct 17 01:15 EVNT.46776529._000392.pool.root.1
[2025-10-17 05:40:39] -rw-r--r--. 2 boinc boinc     15120 Oct 17 01:15 start_atlas.sh
[2025-10-17 05:40:39] drwxrwx--x. 2 boinc boinc        68 Oct 17 01:15 shared
[2025-10-17 05:40:39] -rw-r--r--. 2 boinc boinc    569680 Oct 17 01:15 input.tar.gz
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc         0 Oct 17 01:15 boinc_lockfile
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc      2558 Oct 17 01:16 pandaJob.out
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc    976710 Oct 17 01:19 agis_schedconf.cvmfs.json
[2025-10-17 05:40:39] drwx------. 5 boinc boinc      4096 Oct 17 01:20 pilot3
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc 208878501 Oct 17 05:36 HITS.46776533._010038.pool.root.1
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc       531 Oct 17 05:36 boinc_task_state.xml
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc      1019 Oct 17 05:37 memory_monitor_summary.json
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc   1560740 Oct 17 05:38 agis_ddmendpoints.agis.ALL.json
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc    481146 Oct 17 05:38 log.46776533._010038.job.log.tgz.1
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc      7782 Oct 17 05:39 heartbeat.json
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc        95 Oct 17 05:40 pilot_heartbeat.json
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc        28 Oct 17 05:40 wrapper_checkpoint.txt
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc      8192 Oct 17 05:40 boinc_mmap_file
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc      4885 Oct 17 05:40 pilotlog.txt
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc   2092173 Oct 17 05:40 log.46776533._010038.job.log.1
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc       357 Oct 17 05:40 output.list
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc       620 Oct 17 05:40 runtime_log
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc   2590720 Oct 17 05:40 result.tar.gz
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc      8717 Oct 17 05:40 runtime_log.err
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc       657 Oct 17 05:40 gUNNDmcYUT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7ZpNDmKKPWMn.diag
[2025-10-17 05:40:39] -rw-r--r--. 1 boinc boinc     20618 Oct 17 05:40 stderr.txt
[2025-10-17 05:40:39] HITS file was successfully produced:
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc 208878501 Oct 17 05:36 shared/HITS.pool.root.1
[2025-10-17 05:40:39]  *** Contents of shared directory: ***
[2025-10-17 05:40:39] total 428620
[2025-10-17 05:40:39] -rw-r--r--. 2 boinc boinc 226842393 Oct 17 01:15 ATLAS.root_0
[2025-10-17 05:40:39] -rw-r--r--. 2 boinc boinc     15120 Oct 17 01:15 start_atlas.sh
[2025-10-17 05:40:39] -rw-r--r--. 2 boinc boinc    569680 Oct 17 01:15 input.tar.gz
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc 208878501 Oct 17 05:36 HITS.pool.root.1
[2025-10-17 05:40:39] -rw-------. 1 boinc boinc   2590720 Oct 17 05:40 result.tar.gz
05:40:41 (17736): run_atlas exited; CPU time 54873.886501
05:40:41 (17736): called boinc_finish(0)

</stderr_txt>
]]>

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