Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:41:30 (435839): wrapper (7.7.26015): starting
16:41:30 (435839): wrapper: running run_atlas (--nthreads 4)
[2025-10-16 16:41:30] Arguments: --nthreads 4
[2025-10-16 16:41:30] Threads: 4
[2025-10-16 16:41:30] Checking for CVMFS
[2025-10-16 16:41:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 16:41:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 16:41:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 16:41:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 16:41:31] 2.9.2.0 85452 745 86240 151778 0 57 22890689 36864000 0 130560 0 927689 99.992 33402 1460 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-16 16:41:31] CVMFS is ok
[2025-10-16 16:41:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 16:41:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 16:41:31] Further information can be found at the LHC@home message board.
[2025-10-16 16:41:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 16:41:31] Checking for apptainer binary...
[2025-10-16 16:41:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 16:41:31] Running /usr/bin/apptainer --version
[2025-10-16 16:41:31] apptainer version 1.4.1-1.1
[2025-10-16 16:41:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 16:41:31] thA373a
[2025-10-16 16:41:31] apptainer works
[2025-10-16 16:41:31] Set ATHENA_PROC_NUMBER=4
[2025-10-16 16:41:31] Set ATHENA_CORE_NUMBER=4
[2025-10-16 16:41:31] Starting ATLAS job with PandaID=6846962535
[2025-10-16 16:41:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 17:59:49]  *** The last 200 lines of the pilot log: ***
[2025-10-16 17:59:49] 2025-10-16 15:59:04,642 | INFO     | all job control threads have been joined
[2025-10-16 17:59:49] 2025-10-16 15:59:04,746 | INFO     | all data control threads have been joined
[2025-10-16 17:59:49] 2025-10-16 15:59:05,247 | INFO     | [job] retrieve thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:05,247 | INFO     | [job] queue monitor thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:05,247 | INFO     | [job] job monitor thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:05,302 | INFO     | all payload control threads have been joined
[2025-10-16 17:59:49] 2025-10-16 15:59:05,411 | INFO     | [payload] validate_post thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:05,648 | INFO     | [job] control thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:05,694 | INFO     | [job] validate thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:05,752 | INFO     | [data] control thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:05,823 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:05,996 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:06,175 | INFO     | [data] copytool_in thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:06,248 | INFO     | [data] copytool_out thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:06,277 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:06,308 | INFO     | [payload] control thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:06,552 | INFO     | [payload] failed_post thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:08,639 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:14,762 | INFO     | job.realtimelogging is not enabled
[2025-10-16 17:59:49] 2025-10-16 15:59:15,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 17:59:49] 2025-10-16 15:59:33,805 | INFO     | PID=439641 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-16 17:59:49] 2025-10-16 15:59:33,806 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 17:59:49] 2025-10-16 15:59:33,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 17:59:49] 2025-10-16 15:59:33,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 17:59:49] 2025-10-16 15:59:43,493 | INFO     | [monitor] cgroup control has ended
[2025-10-16 17:59:49] 2025-10-16 15:59:43,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730354288448)>', '<ExcThread(monitor, started 139729647433472)>']
[2025-10-16 17:59:49] 2025-10-16 15:59:44,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 17:59:49] 2025-10-16 15:59:44,865 | INFO     | [monitor] control thread has ended
[2025-10-16 17:59:49] 2025-10-16 15:59:49,005 | INFO     | all workflow threads have been joined
[2025-10-16 17:59:49] 2025-10-16 15:59:49,005 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 17:59:49] 2025-10-16 15:59:49,005 | INFO     | traces error code: 0
[2025-10-16 17:59:49] 2025-10-16 15:59:49,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 17:59:49] 2025-10-16 15:59:49,082 [wrapper] ==== pilot stdout END ====
[2025-10-16 17:59:49] 2025-10-16 15:59:49,086 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 17:59:49] 2025-10-16 15:59:49,089 [wrapper] pilotpid: 439641
[2025-10-16 17:59:49] 2025-10-16 15:59:49,093 [wrapper] Pilot exit status: 0
[2025-10-16 17:59:49] 2025-10-16 15:59:49,104 [wrapper] pandaids: 6846962535
[2025-10-16 17:59:49] 2025-10-16 15:59:49,126 [wrapper] cleanup supervisor_pilot  458645 439642
[2025-10-16 17:59:49] 2025-10-16 15:59:49,130 [wrapper] Test setup, not cleaning
[2025-10-16 17:59:49] 2025-10-16 15:59:49,134 [wrapper] apfmon messages muted
[2025-10-16 17:59:49] 2025-10-16 15:59:49,138 [wrapper] ==== wrapper stdout END ====
[2025-10-16 17:59:49] 2025-10-16 15:59:49,142 [wrapper] ==== wrapper stderr END ====
[2025-10-16 17:59:49]  *** Error codes and diagnostics ***
[2025-10-16 17:59:49]     "exeErrorCode": 0,
[2025-10-16 17:59:49]     "exeErrorDiag": "",
[2025-10-16 17:59:49]     "pilotErrorCode": 0,
[2025-10-16 17:59:49]     "pilotErrorDiag": "",
[2025-10-16 17:59:49]  *** Listing of results directory ***
[2025-10-16 17:59:49] total 435032
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc    557409 Oct 16 06:36 pilot3.tar.gz
[2025-10-16 17:59:49] -rwx------ 1 boinc boinc     36292 Oct 16 07:00 runpilot2-wrapper.sh
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc      5112 Oct 16 07:00 queuedata.json
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc       100 Oct 16 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 17:59:49] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 16:41 run_atlas
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc       105 Oct 16 16:41 job.xml
[2025-10-16 17:59:49] -rw-r--r-- 2 boinc boinc 229468617 Oct 16 16:41 EVNT.46776529._000423.pool.root.1
[2025-10-16 17:59:49] -rw-r--r-- 2 boinc boinc    569674 Oct 16 16:41 input.tar.gz
[2025-10-16 17:59:49] -rw-r--r-- 2 boinc boinc     15120 Oct 16 16:41 start_atlas.sh
[2025-10-16 17:59:49] drwxrwx--x 2 boinc boinc      4096 Oct 16 16:41 shared
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc         0 Oct 16 16:41 boinc_setup_complete
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc      6376 Oct 16 16:41 init_data.xml
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc         0 Oct 16 16:41 boinc_lockfile
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc      2560 Oct 16 16:41 pandaJob.out
[2025-10-16 17:59:49] -rw------- 1 boinc boinc    976761 Oct 16 16:41 agis_schedconf.cvmfs.json
[2025-10-16 17:59:49] -rw------- 1 boinc boinc   1560740 Oct 16 16:41 agis_ddmendpoints.agis.ALL.json
[2025-10-16 17:59:49] drwx------ 5 boinc boinc      4096 Oct 16 16:41 pilot3
[2025-10-16 17:59:49] -rw------- 1 boinc boinc 210226711 Oct 16 17:58 HITS.46776533._010805.pool.root.1
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc       530 Oct 16 17:58 boinc_task_state.xml
[2025-10-16 17:59:49] -rw------- 1 boinc boinc      1024 Oct 16 17:58 memory_monitor_summary.json
[2025-10-16 17:59:49] -rw------- 1 boinc boinc    262738 Oct 16 17:58 log.46776533._010805.job.log.tgz.1
[2025-10-16 17:59:49] -rw------- 1 boinc boinc      7769 Oct 16 17:59 heartbeat.json
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc      8192 Oct 16 17:59 boinc_mmap_file
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc        27 Oct 16 17:59 wrapper_checkpoint.txt
[2025-10-16 17:59:49] -rw------- 1 boinc boinc        95 Oct 16 17:59 pilot_heartbeat.json
[2025-10-16 17:59:49] -rw------- 1 boinc boinc      4823 Oct 16 17:59 pilotlog.txt
[2025-10-16 17:59:49] -rw------- 1 boinc boinc    683732 Oct 16 17:59 log.46776533._010805.job.log.1
[2025-10-16 17:59:49] -rw------- 1 boinc boinc       357 Oct 16 17:59 output.list
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc       620 Oct 16 17:59 runtime_log
[2025-10-16 17:59:49] -rw------- 1 boinc boinc    962560 Oct 16 17:59 result.tar.gz
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc      8782 Oct 16 17:59 runtime_log.err
[2025-10-16 17:59:49] -rw------- 1 boinc boinc       659 Oct 16 17:59 BkvMDm0GVT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfkpNDm4iJhpm.diag
[2025-10-16 17:59:49] -rw-r--r-- 1 boinc boinc      6690 Oct 16 17:59 stderr.txt
[2025-10-16 17:59:49] HITS file was successfully produced:
[2025-10-16 17:59:49] -rw------- 1 boinc boinc 210226711 Oct 16 17:58 shared/HITS.pool.root.1
[2025-10-16 17:59:49]  *** Contents of shared directory: ***
[2025-10-16 17:59:49] total 430916
[2025-10-16 17:59:49] -rw-r--r-- 2 boinc boinc 229468617 Oct 16 16:41 ATLAS.root_0
[2025-10-16 17:59:49] -rw-r--r-- 2 boinc boinc    569674 Oct 16 16:41 input.tar.gz
[2025-10-16 17:59:49] -rw-r--r-- 2 boinc boinc     15120 Oct 16 16:41 start_atlas.sh
[2025-10-16 17:59:49] -rw------- 1 boinc boinc 210226711 Oct 16 17:58 HITS.pool.root.1
[2025-10-16 17:59:49] -rw------- 1 boinc boinc    962560 Oct 16 17:59 result.tar.gz
18:00:11 (435839): run_atlas exited; CPU time 17580.293349
18:00:11 (435839): called boinc_finish(0)

</stderr_txt>
]]>

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