Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:29:02 (14662): wrapper (7.7.26015): starting
00:29:02 (14662): wrapper: running run_atlas (--nthreads 8)
[2025-10-17 00:29:02] Arguments: --nthreads 8
[2025-10-17 00:29:02] Threads: 8
[2025-10-17 00:29:02] Checking for CVMFS
[2025-10-17 00:29:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 00:29:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 00:29:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 00:29:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 00:29:04] 2.11.2.0 25755 226950 140916 151795 1 60 24890289 25165824 4632 130560 0 129867215 99.881 69711731 3527 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-17 00:29:04] CVMFS is ok
[2025-10-17 00:29:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 00:29:04] Checking for apptainer binary...
[2025-10-17 00:29:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 00:29:04] Running /usr/bin/apptainer --version
[2025-10-17 00:29:04] apptainer version 1.3.2-1.el7
[2025-10-17 00:29:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 00:29:16] cg-vwn458.simple-grid.lan
[2025-10-17 00:29:16] apptainer works
[2025-10-17 00:29:16] Set ATHENA_PROC_NUMBER=8
[2025-10-17 00:29:16] Set ATHENA_CORE_NUMBER=8
[2025-10-17 00:29:16] Starting ATLAS job with PandaID=6846962147
[2025-10-17 00:29:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 04:43:32]  *** The last 200 lines of the pilot log: ***
[2025-10-17 04:43:32] 2025-10-17 02:42:25,525 | INFO     | time since job start (14968s) is within the limit (172800.0s)
[2025-10-17 04:43:32] 2025-10-17 02:42:27,426 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-17 04:43:32] 2025-10-17 02:42:27,427 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,429 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6846962147/memory_monitor_summary.json (trf name=prmon)
[2025-10-17 04:43:32] 2025-10-17 02:42:27,430 | INFO     | extracted standard info from prmon json
[2025-10-17 04:43:32] 2025-10-17 02:42:27,430 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 04:43:32] 2025-10-17 02:42:27,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 04:43:32] 2025-10-17 02:42:27,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 04:43:32] 2025-10-17 02:42:27,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 04:43:32] 2025-10-17 02:42:27,435 | INFO     | fitting pss+swap vs Time
[2025-10-17 04:43:32] 2025-10-17 02:42:27,435 | INFO     | sum of square deviations: 4127772278.0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,437 | INFO     | sum of deviations: 35656647870.99997
[2025-10-17 04:43:32] 2025-10-17 02:42:27,437 | INFO     | mean x: 1760661637.0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,438 | INFO     | mean y: 2455420.1729957806
[2025-10-17 04:43:32] 2025-10-17 02:42:27,438 | INFO     | -- intersect: -15206545411.846102
[2025-10-17 04:43:32] 2025-10-17 02:42:27,438 | INFO     | intersect: -15206545411.846102
[2025-10-17 04:43:32] 2025-10-17 02:42:27,438 | INFO     | chi2: 6.636808624084295
[2025-10-17 04:43:32] 2025-10-17 02:42:27,439 | INFO     | sum of square deviations: 3871990738.0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,440 | INFO     | sum of deviations: 66955126067.49999
[2025-10-17 04:43:32] 2025-10-17 02:42:27,441 | INFO     | mean x: 1760661484.5
[2025-10-17 04:43:32] 2025-10-17 02:42:27,441 | INFO     | mean y: 2473835.918103448
[2025-10-17 04:43:32] 2025-10-17 02:42:27,441 | INFO     | -- intersect: -30443185679.729527
[2025-10-17 04:43:32] 2025-10-17 02:42:27,441 | INFO     | intersect: -30443185679.729527
[2025-10-17 04:43:32] 2025-10-17 02:42:27,448 | INFO     | chi2: 5.067073669894222
[2025-10-17 04:43:32] 2025-10-17 02:42:27,448 | INFO     | current chi2=5.067073669894222 (change=23.651954472420172 %)
[2025-10-17 04:43:32] 2025-10-17 02:42:27,448 | INFO     | right removable region: 231
[2025-10-17 04:43:32] 2025-10-17 02:42:27,448 | INFO     | sum of square deviations: 3871990738.0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,450 | INFO     | sum of deviations: -42356351101.5
[2025-10-17 04:43:32] 2025-10-17 02:42:27,450 | INFO     | mean x: 1760661789.5
[2025-10-17 04:43:32] 2025-10-17 02:42:27,450 | INFO     | mean y: 2501861.349137931
[2025-10-17 04:43:32] 2025-10-17 02:42:27,450 | INFO     | -- intersect: 19262674205.040646
[2025-10-17 04:43:32] 2025-10-17 02:42:27,450 | INFO     | intersect: 19262674205.040646
[2025-10-17 04:43:32] 2025-10-17 02:42:27,451 | INFO     | chi2: 2.409670087102989
[2025-10-17 04:43:32] 2025-10-17 02:42:27,451 | INFO     | current chi2=2.409670087102989 (change=63.69233733275742 %)
[2025-10-17 04:43:32] 2025-10-17 02:42:27,451 | INFO     | sum of square deviations: 3627000098.0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,453 | INFO     | sum of deviations: -63365396999.99999
[2025-10-17 04:43:32] 2025-10-17 02:42:27,453 | INFO     | mean x: 1760661942.0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,453 | INFO     | mean y: 2514807.6431718064
[2025-10-17 04:43:32] 2025-10-17 02:42:27,453 | INFO     | -- intersect: 30762106735.732765
[2025-10-17 04:43:32] 2025-10-17 02:42:27,453 | INFO     | intersect: 30762106735.732765
[2025-10-17 04:43:32] 2025-10-17 02:42:27,454 | INFO     | chi2: 1.8679618488894516
[2025-10-17 04:43:32] 2025-10-17 02:42:27,454 | INFO     | current chi2=1.8679618488894516 (change=22.480597701438988 %)
[2025-10-17 04:43:32] 2025-10-17 02:42:27,454 | INFO     | left removable region: 20
[2025-10-17 04:43:32] 2025-10-17 02:42:27,454 | INFO     | sum of square deviations: 2912836010.0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,456 | INFO     | sum of deviations: -20141977106.0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,456 | INFO     | mean x: 1760662064.0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,456 | INFO     | mean y: 2527618.2748815166
[2025-10-17 04:43:32] 2025-10-17 02:42:27,456 | INFO     | -- intersect: 12177334185.737877
[2025-10-17 04:43:32] 2025-10-17 02:42:27,456 | INFO     | intersect: 12177334185.737877
[2025-10-17 04:43:32] 2025-10-17 02:42:27,456 | INFO     | chi2: 0.13245493223829238
[2025-10-17 04:43:32] 2025-10-17 02:42:27,457 | INFO     | -- intersect: 12177334185.737877
[2025-10-17 04:43:32] 2025-10-17 02:42:27,457 | INFO     | current memory leak: -6.91 B/s (using 211 data points, chi2=0.13)
[2025-10-17 04:43:32] 2025-10-17 02:42:27,457 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2025-10-17 04:43:32] 2025-10-17 02:42:27,458 | INFO     | ..............................
[2025-10-17 04:43:32] 2025-10-17 02:42:27,458 | INFO     | . Timing measurements:
[2025-10-17 04:43:32] 2025-10-17 02:42:27,458 | INFO     | . get job = 0 s
[2025-10-17 04:43:32] 2025-10-17 02:42:27,458 | INFO     | . initial setup = 9 s
[2025-10-17 04:43:32] 2025-10-17 02:42:27,458 | INFO     | . payload setup = 122 s
[2025-10-17 04:43:32] 2025-10-17 02:42:27,458 | INFO     | . stage-in = 0 s
[2025-10-17 04:43:32] 2025-10-17 02:42:27,458 | INFO     | . payload execution = 14565 s
[2025-10-17 04:43:32] 2025-10-17 02:42:27,458 | INFO     | . stage-out = 3 s
[2025-10-17 04:43:32] 2025-10-17 02:42:27,458 | INFO     | . log creation = 1 s
[2025-10-17 04:43:32] 2025-10-17 02:42:27,458 | INFO     | ..............................
[2025-10-17 04:43:32] 2025-10-17 02:42:27,544 | INFO     | time since job start (14970s) is within the limit (172800.0s)
[2025-10-17 04:43:32] 2025-10-17 02:42:27,814 | INFO     | 
[2025-10-17 04:43:32] 2025-10-17 02:42:27,814 | INFO     | job summary report
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | --------------------------------------------------
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | PanDA job id: 6846962147
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | task id: 46776533
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | errors: (none)
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | pilot state: finished 
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | transexitcode: 0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | exeerrorcode: 0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | exeerrordiag: 
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | exitcode: 0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | exitmsg: OK
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | cpuconsumptiontime: 54806 s
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | nevents: 400
[2025-10-17 04:43:32] 2025-10-17 02:42:27,815 | INFO     | neventsw: 0
[2025-10-17 04:43:32] 2025-10-17 02:42:27,816 | INFO     | pid: 25001
[2025-10-17 04:43:32] 2025-10-17 02:42:27,816 | INFO     | pgrp: 25001
[2025-10-17 04:43:32] 2025-10-17 02:42:27,816 | INFO     | corecount: 8
[2025-10-17 04:43:32] 2025-10-17 02:42:27,816 | INFO     | event service: False
[2025-10-17 04:43:32] 2025-10-17 02:42:27,816 | INFO     | sizes: {0: 2348704, 1: 2348959, 12: 2348959, 23: 2348987, 33: 2349015, 44: 2349071, 55: 2349227, 65: 2349255, 76: 2349283, 83: 2349601, 87: 2349657, 14692: 2380141
[2025-10-17 04:43:32] 2025-10-17 02:42:27,816 | INFO     | --------------------------------------------------
[2025-10-17 04:43:32] 2025-10-17 02:42:27,816 | INFO     | 
[2025-10-17 04:43:32] 2025-10-17 02:42:27,816 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-10-17 04:43:32] 2025-10-17 02:42:28,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,167 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 04:43:32] 2025-10-17 02:42:28,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 04:43:32] 2025-10-17 02:42:28,167 | INFO     | job 6846962147 has completed (purged errors)
[2025-10-17 04:43:32] 2025-10-17 02:42:28,167 | INFO     | overall cleanup function is called
[2025-10-17 04:43:32] 2025-10-17 02:42:29,176 | INFO     | --- collectZombieJob: --- 10, [25001]
[2025-10-17 04:43:32] 2025-10-17 02:42:29,176 | INFO     | zombie collector waiting for pid 25001
[2025-10-17 04:43:32] 2025-10-17 02:42:29,177 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 04:43:32] 2025-10-17 02:42:29,177 | INFO     | collected zombie processes
[2025-10-17 04:43:32] 2025-10-17 02:42:29,177 | INFO     | will attempt to kill all subprocesses of pid=25001
[2025-10-17 04:43:32] 2025-10-17 02:42:29,297 | INFO     | process IDs to be killed: [25001] (in reverse order)
[2025-10-17 04:43:32] 2025-10-17 02:42:30,006 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 04:43:32] 2025-10-17 02:42:30,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 04:43:32] 2025-10-17 02:42:30,009 | INFO     | did not find any defunct processes belonging to 25001
[2025-10-17 04:43:32] 2025-10-17 02:42:30,012 | INFO     | did not find any defunct processes belonging to 25001
[2025-10-17 04:43:32] 2025-10-17 02:42:30,012 | INFO     | ready for new job
[2025-10-17 04:43:32] 2025-10-17 02:42:30,012 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 04:43:32] 2025-10-17 02:42:30,014 | INFO     | ***************************************
[2025-10-17 04:43:32] 2025-10-17 02:42:30,014 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 04:43:32] 2025-10-17 02:42:30,015 | INFO     | ***************************************
[2025-10-17 04:43:32] 2025-10-17 02:42:30,015 | INFO     | 
[2025-10-17 04:43:32] 2025-10-17 02:42:30,015 | INFO     | pilot is running in a VM
[2025-10-17 04:43:32] 2025-10-17 02:42:30,015 | INFO     | architecture information:
[2025-10-17 04:43:32] 2025-10-17 02:42:30,027 | INFO     | executing command: cat /etc/os-release
[2025-10-17 04:43:32] 2025-10-17 02:42:30,308 | INFO     | cat /etc/os-release:
[2025-10-17 04:43:32] NAME="CentOS Linux"
[2025-10-17 04:43:32] VERSION="7 (Core)"
[2025-10-17 04:43:32] ID="centos"
[2025-10-17 04:43:32] ID_LIKE="rhel fedora"
[2025-10-17 04:43:32] VERSION_ID="7"
[2025-10-17 04:43:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 04:43:32] ANSI_COLOR="0;31"
[2025-10-17 04:43:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 04:43:32] HOME_URL="https://www.centos.org/"
[2025-10-17 04:43:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 04:43:32] 
[2025-10-17 04:43:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 04:43:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 04:43:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 04:43:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 04:43:32] 
[2025-10-17 04:43:32] 2025-10-17 02:42:30,308 | INFO     | ***************************************
[2025-10-17 04:43:32] 2025-10-17 02:42:30,811 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-10-17 04:43:32] 2025-10-17 02:42:31,115 | INFO     | sufficient remaining disk space (495769878528 B)
[2025-10-17 04:43:32] 2025-10-17 02:42:31,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 04:43:32] 2025-10-17 02:42:31,115 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 04:43:32] 2025-10-17 02:42:31,116 | INFO     | update_server=False
[2025-10-17 04:43:32] 2025-10-17 02:42:31,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 04:43:32] 2025-10-17 02:42:31,117 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 04:43:32] 2025-10-17 02:42:31,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 04:43:32] 2025-10-17 02:42:31,302 | INFO     | aborting loop
[2025-10-17 04:43:32] 2025-10-17 02:42:31,752 | INFO     | all payload control threads have been joined
[2025-10-17 04:43:32] 2025-10-17 02:42:32,010 | INFO     | all data control threads have been joined
[2025-10-17 04:43:32] 2025-10-17 02:42:32,121 | INFO     | [job] retrieve thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:32,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:32,308 | INFO     | [job] job monitor thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:32,328 | INFO     | [payload] validate_post thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:32,376 | INFO     | all job control threads have been joined
[2025-10-17 04:43:32] 2025-10-17 02:42:32,612 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:32,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 04:43:32] 2025-10-17 02:42:32,757 | INFO     | [payload] control thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:32,934 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:32,961 | INFO     | [payload] failed_post thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:33,016 | INFO     | [data] control thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:33,086 | INFO     | [data] copytool_in thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:33,124 | INFO     | [data] copytool_out thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:33,382 | INFO     | [job] control thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:33,415 | INFO     | [job] validate thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:33,450 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:33,635 | INFO     | [job] queue monitor thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:42:34,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 04:43:32] 2025-10-17 02:42:38,235 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 04:43:32] 2025-10-17 02:43:00,775 | INFO     | PID=18455 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-17 04:43:32] 2025-10-17 02:43:00,776 | INFO     | .. there are 9 such processes running
[2025-10-17 04:43:32] 2025-10-17 02:43:00,776 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 04:43:32] 2025-10-17 02:43:00,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 04:43:32] 2025-10-17 02:43:00,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 04:43:32] 2025-10-17 02:43:22,420 | INFO     | [monitor] cgroup control has ended
[2025-10-17 04:43:32] 2025-10-17 02:43:22,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461747033920)>', '<ExcThread(monitor, started 140461293414144)>']
[2025-10-17 04:43:32] 2025-10-17 02:43:22,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 04:43:32] 2025-10-17 02:43:22,906 | INFO     | [monitor] control thread has ended
[2025-10-17 04:43:32] 2025-10-17 02:43:27,814 | INFO     | all workflow threads have been joined
[2025-10-17 04:43:32] 2025-10-17 02:43:27,814 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 04:43:32] 2025-10-17 02:43:27,815 | INFO     | traces error code: 0
[2025-10-17 04:43:32] 2025-10-17 02:43:27,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 04:43:32] 2025-10-17 02:43:28,188 [wrapper] ==== pilot stdout END ====
[2025-10-17 04:43:32] 2025-10-17 02:43:28,285 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 04:43:32] 2025-10-17 02:43:28,369 [wrapper] pilotpid: 18455
[2025-10-17 04:43:32] 2025-10-17 02:43:28,437 [wrapper] Pilot exit status: 0
[2025-10-17 04:43:32] 2025-10-17 02:43:28,910 [wrapper] pandaids: 6846962147
[2025-10-17 04:43:32] 2025-10-17 02:43:29,668 [wrapper] cleanup supervisor_pilot 19301 18456
[2025-10-17 04:43:32] 2025-10-17 02:43:29,727 [wrapper] Test setup, not cleaning
[2025-10-17 04:43:32] 2025-10-17 02:43:29,859 [wrapper] apfmon messages muted
[2025-10-17 04:43:32] 2025-10-17 02:43:29,987 [wrapper] ==== wrapper stdout END ====
[2025-10-17 04:43:32] 2025-10-17 02:43:30,100 [wrapper] ==== wrapper stderr END ====
[2025-10-17 04:43:32]  *** Error codes and diagnostics ***
[2025-10-17 04:43:32]     "exeErrorCode": 0,
[2025-10-17 04:43:32]     "exeErrorDiag": "",
[2025-10-17 04:43:32]     "pilotErrorCode": 0,
[2025-10-17 04:43:32]     "pilotErrorDiag": "",
[2025-10-17 04:43:32]  *** Listing of results directory ***
[2025-10-17 04:43:32] total 443568
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc    557409 Oct 16 06:36 pilot3.tar.gz
[2025-10-17 04:43:32] -rwx------. 1 boinc boinc     36292 Oct 16 06:41 runpilot2-wrapper.sh
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc      5112 Oct 16 06:41 queuedata.json
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc       100 Oct 17 00:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 04:43:32] -rwxr-xr-x. 1 boinc boinc      7986 Oct 17 00:29 run_atlas
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc       105 Oct 17 00:29 job.xml
[2025-10-17 04:43:32] -rw-r--r--. 2 boinc boinc 229740415 Oct 17 00:29 EVNT.46776529._000412.pool.root.1
[2025-10-17 04:43:32] -rw-r--r--. 2 boinc boinc     15120 Oct 17 00:29 start_atlas.sh
[2025-10-17 04:43:32] drwxrwx--x. 2 boinc boinc        68 Oct 17 00:29 shared
[2025-10-17 04:43:32] -rw-r--r--. 2 boinc boinc    569679 Oct 17 00:29 input.tar.gz
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc      6391 Oct 17 00:29 init_data.xml
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc         0 Oct 17 00:29 boinc_lockfile
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc      2560 Oct 17 00:29 pandaJob.out
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc    976726 Oct 17 00:32 agis_schedconf.cvmfs.json
[2025-10-17 04:43:32] drwx------. 5 boinc boinc      4096 Oct 17 00:32 pilot3
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc 215644335 Oct 17 04:39 HITS.46776533._010530.pool.root.1
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc       531 Oct 17 04:39 boinc_task_state.xml
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc      1013 Oct 17 04:40 memory_monitor_summary.json
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc   1560740 Oct 17 04:40 agis_ddmendpoints.agis.ALL.json
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc    462100 Oct 17 04:40 log.46776533._010530.job.log.tgz.1
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc      7777 Oct 17 04:42 heartbeat.json
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc        95 Oct 17 04:43 pilot_heartbeat.json
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc      8192 Oct 17 04:43 boinc_mmap_file
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc        28 Oct 17 04:43 wrapper_checkpoint.txt
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc      4885 Oct 17 04:43 pilotlog.txt
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc   2004922 Oct 17 04:43 log.46776533._010530.job.log.1
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc       357 Oct 17 04:43 output.list
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc       620 Oct 17 04:43 runtime_log
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc   2488320 Oct 17 04:43 result.tar.gz
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc      8717 Oct 17 04:43 runtime_log.err
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc       656 Oct 17 04:43 fbSNDmnyUT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVhpNDmiGfctn.diag
[2025-10-17 04:43:32] -rw-r--r--. 1 boinc boinc     20802 Oct 17 04:43 stderr.txt
[2025-10-17 04:43:32] HITS file was successfully produced:
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc 215644335 Oct 17 04:39 shared/HITS.pool.root.1
[2025-10-17 04:43:32]  *** Contents of shared directory: ***
[2025-10-17 04:43:32] total 437956
[2025-10-17 04:43:32] -rw-r--r--. 2 boinc boinc 229740415 Oct 17 00:29 ATLAS.root_0
[2025-10-17 04:43:32] -rw-r--r--. 2 boinc boinc     15120 Oct 17 00:29 start_atlas.sh
[2025-10-17 04:43:32] -rw-r--r--. 2 boinc boinc    569679 Oct 17 00:29 input.tar.gz
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc 215644335 Oct 17 04:39 HITS.pool.root.1
[2025-10-17 04:43:32] -rw-------. 1 boinc boinc   2488320 Oct 17 04:43 result.tar.gz
04:43:34 (14662): run_atlas exited; CPU time 54992.329420
04:43:34 (14662): called boinc_finish(0)

</stderr_txt>
]]>

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