Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:01:23 (287732): wrapper (7.7.26015): starting
10:01:23 (287732): wrapper: running run_atlas (--nthreads 4)
[2025-10-16 10:01:23] Arguments: --nthreads 4
[2025-10-16 10:01:23] Threads: 4
[2025-10-16 10:01:23] Checking for CVMFS
[2025-10-16 10:01:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 10:01:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 10:01:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 10:01:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 10:01:24] 2.9.2.0 85452 345 74264 151763 3 188 22807022 36864001 0 130560 0 540883 99.993 13515 1249 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-16 10:01:24] CVMFS is ok
[2025-10-16 10:01:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 10:01:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 10:01:24] Further information can be found at the LHC@home message board.
[2025-10-16 10:01:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 10:01:24] Checking for apptainer binary...
[2025-10-16 10:01:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 10:01:24] Running /usr/bin/apptainer --version
[2025-10-16 10:01:24] apptainer version 1.4.1-1.1
[2025-10-16 10:01:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 10:01:24] thA373a
[2025-10-16 10:01:24] apptainer works
[2025-10-16 10:01:24] Set ATHENA_PROC_NUMBER=4
[2025-10-16 10:01:24] Set ATHENA_CORE_NUMBER=4
[2025-10-16 10:01:24] Starting ATLAS job with PandaID=6846891055
[2025-10-16 10:01:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 11:18:42]  *** The last 200 lines of the pilot log: ***
[2025-10-16 11:18:42] 2025-10-16 09:17:54,947 | INFO     | all payload control threads have been joined
[2025-10-16 11:18:42] 2025-10-16 09:17:55,678 | INFO     | [job] retrieve thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:55,678 | INFO     | [job] queue monitor thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:55,679 | INFO     | [job] job monitor thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:55,687 | INFO     | [data] control thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:55,783 | INFO     | [job] validate thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:55,837 | INFO     | [job] control thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:55,916 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:55,953 | INFO     | [payload] control thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:55,989 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:56,143 | INFO     | [payload] validate_post thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:56,238 | INFO     | [data] copytool_in thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:56,679 | INFO     | [data] copytool_out thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:56,742 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:57,233 | INFO     | [payload] failed_post thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:17:58,694 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:18:05,321 | INFO     | job.realtimelogging is not enabled
[2025-10-16 11:18:42] 2025-10-16 09:18:06,327 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 11:18:42] 2025-10-16 09:18:24,297 | INFO     | PID=291525 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-16 11:18:42] 2025-10-16 09:18:24,297 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 11:18:42] 2025-10-16 09:18:24,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 11:18:42] 2025-10-16 09:18:24,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 11:18:42] 2025-10-16 09:18:36,226 | INFO     | [monitor] cgroup control has ended
[2025-10-16 11:18:42] 2025-10-16 09:18:36,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558760335168)>', '<ExcThread(monitor, started 140558391547648)>']
[2025-10-16 11:18:42] 2025-10-16 09:18:37,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 11:18:42] 2025-10-16 09:18:37,366 | INFO     | [monitor] control thread has ended
[2025-10-16 11:18:42] 2025-10-16 09:18:41,836 | INFO     | all workflow threads have been joined
[2025-10-16 11:18:42] 2025-10-16 09:18:41,837 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 11:18:42] 2025-10-16 09:18:41,838 | INFO     | traces error code: 0
[2025-10-16 11:18:42] 2025-10-16 09:18:41,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 11:18:42] 2025-10-16 09:18:41,917 [wrapper] ==== pilot stdout END ====
[2025-10-16 11:18:42] 2025-10-16 09:18:41,921 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 11:18:42] 2025-10-16 09:18:41,925 [wrapper] pilotpid: 291525
[2025-10-16 11:18:42] 2025-10-16 09:18:41,928 [wrapper] Pilot exit status: 0
[2025-10-16 11:18:42] 2025-10-16 09:18:41,939 [wrapper] pandaids: 6846891055
[2025-10-16 11:18:42] 2025-10-16 09:18:41,962 [wrapper] cleanup supervisor_pilot  311067 291526
[2025-10-16 11:18:42] 2025-10-16 09:18:41,966 [wrapper] Test setup, not cleaning
[2025-10-16 11:18:42] 2025-10-16 09:18:41,969 [wrapper] apfmon messages muted
[2025-10-16 11:18:42] 2025-10-16 09:18:41,974 [wrapper] ==== wrapper stdout END ====
[2025-10-16 11:18:42] 2025-10-16 09:18:41,977 [wrapper] ==== wrapper stderr END ====
[2025-10-16 11:18:42]  *** Error codes and diagnostics ***
[2025-10-16 11:18:42]     "exeErrorCode": 0,
[2025-10-16 11:18:42]     "exeErrorDiag": "",
[2025-10-16 11:18:42]     "pilotErrorCode": 0,
[2025-10-16 11:18:42]     "pilotErrorDiag": "",
[2025-10-16 11:18:42]  *** Listing of results directory ***
[2025-10-16 11:18:42] total 430708
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc    557409 Oct 16 03:30 pilot3.tar.gz
[2025-10-16 11:18:42] -rwx------ 1 boinc boinc     36292 Oct 16 04:23 runpilot2-wrapper.sh
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc      5112 Oct 16 04:23 queuedata.json
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc       100 Oct 16 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 11:18:42] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 10:01 run_atlas
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc       105 Oct 16 10:01 job.xml
[2025-10-16 11:18:42] -rw-r--r-- 2 boinc boinc 228123846 Oct 16 10:01 EVNT.46776529._000088.pool.root.1
[2025-10-16 11:18:42] drwxrwx--x 2 boinc boinc      4096 Oct 16 10:01 shared
[2025-10-16 11:18:42] -rw-r--r-- 2 boinc boinc    569674 Oct 16 10:01 input.tar.gz
[2025-10-16 11:18:42] -rw-r--r-- 2 boinc boinc     15120 Oct 16 10:01 start_atlas.sh
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc         0 Oct 16 10:01 boinc_setup_complete
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc      6376 Oct 16 10:01 init_data.xml
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc         0 Oct 16 10:01 boinc_lockfile
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc      2557 Oct 16 10:01 pandaJob.out
[2025-10-16 11:18:42] -rw------- 1 boinc boinc    973548 Oct 16 10:01 agis_schedconf.cvmfs.json
[2025-10-16 11:18:42] -rw------- 1 boinc boinc   1560740 Oct 16 10:01 agis_ddmendpoints.agis.ALL.json
[2025-10-16 11:18:42] drwx------ 5 boinc boinc      4096 Oct 16 10:01 pilot3
[2025-10-16 11:18:42] -rw------- 1 boinc boinc 207147488 Oct 16 11:17 HITS.46776533._007230.pool.root.1
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc       529 Oct 16 11:17 boinc_task_state.xml
[2025-10-16 11:18:42] -rw------- 1 boinc boinc      1020 Oct 16 11:17 memory_monitor_summary.json
[2025-10-16 11:18:42] -rw------- 1 boinc boinc    270278 Oct 16 11:17 log.46776533._007230.job.log.tgz.1
[2025-10-16 11:18:42] -rw------- 1 boinc boinc      7759 Oct 16 11:17 heartbeat.json
[2025-10-16 11:18:42] -rw------- 1 boinc boinc        95 Oct 16 11:18 pilot_heartbeat.json
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc        27 Oct 16 11:18 wrapper_checkpoint.txt
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc      8192 Oct 16 11:18 boinc_mmap_file
[2025-10-16 11:18:42] -rw------- 1 boinc boinc      4823 Oct 16 11:18 pilotlog.txt
[2025-10-16 11:18:42] -rw------- 1 boinc boinc    675817 Oct 16 11:18 log.46776533._007230.job.log.1
[2025-10-16 11:18:42] -rw------- 1 boinc boinc       357 Oct 16 11:18 output.list
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc       620 Oct 16 11:18 runtime_log
[2025-10-16 11:18:42] -rw------- 1 boinc boinc    962560 Oct 16 11:18 result.tar.gz
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc      8782 Oct 16 11:18 runtime_log.err
[2025-10-16 11:18:42] -rw------- 1 boinc boinc       659 Oct 16 11:18 K8dMDmwpST8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDPXMDmGYjB0m.diag
[2025-10-16 11:18:42] -rw-r--r-- 1 boinc boinc      6490 Oct 16 11:18 stderr.txt
[2025-10-16 11:18:42] HITS file was successfully produced:
[2025-10-16 11:18:42] -rw------- 1 boinc boinc 207147488 Oct 16 11:17 shared/HITS.pool.root.1
[2025-10-16 11:18:42]  *** Contents of shared directory: ***
[2025-10-16 11:18:42] total 426600
[2025-10-16 11:18:42] -rw-r--r-- 2 boinc boinc 228123846 Oct 16 10:01 ATLAS.root_0
[2025-10-16 11:18:42] -rw-r--r-- 2 boinc boinc    569674 Oct 16 10:01 input.tar.gz
[2025-10-16 11:18:42] -rw-r--r-- 2 boinc boinc     15120 Oct 16 10:01 start_atlas.sh
[2025-10-16 11:18:42] -rw------- 1 boinc boinc 207147488 Oct 16 11:17 HITS.pool.root.1
[2025-10-16 11:18:42] -rw------- 1 boinc boinc    962560 Oct 16 11:18 result.tar.gz
11:18:43 (287732): run_atlas exited; CPU time 17273.678224
11:18:43 (287732): called boinc_finish(0)

</stderr_txt>
]]>

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