Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:58 (3821642): wrapper (7.7.26015): starting
10:30:58 (3821642): wrapper: running run_atlas (--nthreads 3)
[2025-10-16 10:30:58] Arguments: --nthreads 3
[2025-10-16 10:30:58] Threads: 3
[2025-10-16 10:30:58] Checking for CVMFS
[2025-10-16 10:30:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 10:30:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 10:30:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 10:30:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 10:30:58] 2.9.2.0 3693231 440 63392 151765 0 56 30291872 36864000 0 130560 0 333825 99.988 17338 1410 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-16 10:30:58] CVMFS is ok
[2025-10-16 10:30:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 10:30:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 10:30:58] Further information can be found at the LHC@home message board.
[2025-10-16 10:30:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 10:30:58] Checking for apptainer binary...
[2025-10-16 10:30:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 10:30:58] Running /usr/bin/apptainer --version
[2025-10-16 10:30:58] apptainer version 1.4.1-1.1
[2025-10-16 10:30:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 10:30:58] thA312a
[2025-10-16 10:30:58] apptainer works
[2025-10-16 10:30:58] Set ATHENA_PROC_NUMBER=3
[2025-10-16 10:30:58] Set ATHENA_CORE_NUMBER=3
[2025-10-16 10:30:58] Starting ATLAS job with PandaID=6846773913
[2025-10-16 10:30:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 12:02:16]  *** The last 200 lines of the pilot log: ***
[2025-10-16 12:02:16] 2025-10-16 10:01:45,702 | INFO     | ready for new job
[2025-10-16 12:02:16] 2025-10-16 10:01:45,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 12:02:16] 2025-10-16 10:01:45,703 | INFO     | ***************************************
[2025-10-16 12:02:16] 2025-10-16 10:01:45,703 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 12:02:16] 2025-10-16 10:01:45,703 | INFO     | ***************************************
[2025-10-16 12:02:16] 2025-10-16 10:01:45,703 | INFO     | 
[2025-10-16 12:02:16] 2025-10-16 10:01:45,703 | INFO     | architecture information:
[2025-10-16 12:02:16] 2025-10-16 10:01:45,703 | INFO     | executing command: cat /etc/os-release
[2025-10-16 12:02:16] 2025-10-16 10:01:45,713 | INFO     | cat /etc/os-release:
[2025-10-16 12:02:16] NAME="CentOS Linux"
[2025-10-16 12:02:16] VERSION="7 (Core)"
[2025-10-16 12:02:16] ID="centos"
[2025-10-16 12:02:16] ID_LIKE="rhel fedora"
[2025-10-16 12:02:16] VERSION_ID="7"
[2025-10-16 12:02:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 12:02:16] ANSI_COLOR="0;31"
[2025-10-16 12:02:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 12:02:16] HOME_URL="https://www.centos.org/"
[2025-10-16 12:02:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 12:02:16] 
[2025-10-16 12:02:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 12:02:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 12:02:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 12:02:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 12:02:16] 
[2025-10-16 12:02:16] 2025-10-16 10:01:45,713 | INFO     | ***************************************
[2025-10-16 12:02:16] 2025-10-16 10:01:46,217 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-16 12:02:16] 2025-10-16 10:01:46,231 | INFO     | sufficient remaining disk space (274384027648 B)
[2025-10-16 12:02:16] 2025-10-16 10:01:46,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 12:02:16] 2025-10-16 10:01:46,231 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 12:02:16] 2025-10-16 10:01:46,231 | INFO     | update_server=False
[2025-10-16 12:02:16] 2025-10-16 10:01:46,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 12:02:16] 2025-10-16 10:01:46,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 12:02:16] 2025-10-16 10:01:46,231 | INFO     | aborting loop
[2025-10-16 12:02:16] 2025-10-16 10:01:46,231 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 12:02:16] 2025-10-16 10:01:46,520 | INFO     | all payload control threads have been joined
[2025-10-16 12:02:16] 2025-10-16 10:01:47,013 | INFO     | all data control threads have been joined
[2025-10-16 12:02:16] 2025-10-16 10:01:47,237 | INFO     | [job] job monitor thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:47,237 | INFO     | [job] retrieve thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:47,237 | INFO     | [job] queue monitor thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:47,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 12:02:16] 2025-10-16 10:01:47,526 | INFO     | [payload] control thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:47,751 | INFO     | [payload] validate_post thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:47,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 12:02:16] 2025-10-16 10:01:47,826 | INFO     | all job control threads have been joined
[2025-10-16 12:02:16] 2025-10-16 10:01:47,837 | INFO     | [payload] failed_post thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:47,995 | INFO     | [data] copytool_in thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:48,019 | INFO     | [data] control thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:48,237 | INFO     | [job] validate thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:48,299 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:48,358 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:48,736 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:48,832 | INFO     | [job] control thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:49,414 | INFO     | [data] copytool_out thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:51,781 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:01:56,968 | INFO     | job.realtimelogging is not enabled
[2025-10-16 12:02:16] 2025-10-16 10:01:57,974 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 12:02:16] 2025-10-16 10:02:10,094 | INFO     | [monitor] cgroup control has ended
[2025-10-16 12:02:16] 2025-10-16 10:02:10,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048236189504)>', '<ExcThread(monitor, started 140047441442560)>']
[2025-10-16 12:02:16] 2025-10-16 10:02:15,687 | INFO     | all workflow threads have been joined
[2025-10-16 12:02:16] 2025-10-16 10:02:15,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 12:02:16] 2025-10-16 10:02:15,688 | INFO     | traces error code: 0
[2025-10-16 12:02:16] 2025-10-16 10:02:15,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 12:02:16] 2025-10-16 10:02:16,712 | INFO     | PID=3825362 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-16 12:02:16] 2025-10-16 10:02:16,712 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 12:02:16] 2025-10-16 10:02:16,712 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 12:02:16] 2025-10-16 10:02:16,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 12:02:16] 2025-10-16 10:02:16,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 12:02:16] 2025-10-16 10:02:16,712 | INFO     | [monitor] control thread has ended
[2025-10-16 12:02:16] 2025-10-16 10:02:16,761 [wrapper] ==== pilot stdout END ====
[2025-10-16 12:02:16] 2025-10-16 10:02:16,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 12:02:16] 2025-10-16 10:02:16,766 [wrapper] pilotpid: 3825362
[2025-10-16 12:02:16] 2025-10-16 10:02:16,768 [wrapper] Pilot exit status: 0
[2025-10-16 12:02:16] 2025-10-16 10:02:16,776 [wrapper] pandaids: 6846773913
[2025-10-16 12:02:16] 2025-10-16 10:02:16,795 [wrapper] cleanup supervisor_pilot 3844634 3825363
[2025-10-16 12:02:16] 2025-10-16 10:02:16,797 [wrapper] Test setup, not cleaning
[2025-10-16 12:02:16] 2025-10-16 10:02:16,800 [wrapper] apfmon messages muted
[2025-10-16 12:02:16] 2025-10-16 10:02:16,802 [wrapper] ==== wrapper stdout END ====
[2025-10-16 12:02:16] 2025-10-16 10:02:16,805 [wrapper] ==== wrapper stderr END ====
[2025-10-16 12:02:16]  *** Error codes and diagnostics ***
[2025-10-16 12:02:16]     "exeErrorCode": 0,
[2025-10-16 12:02:16]     "exeErrorDiag": "",
[2025-10-16 12:02:16]     "pilotErrorCode": 0,
[2025-10-16 12:02:16]     "pilotErrorDiag": "",
[2025-10-16 12:02:16]  *** Listing of results directory ***
[2025-10-16 12:02:16] total 435624
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc    557409 Oct 16 01:33 pilot3.tar.gz
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc      5112 Oct 16 02:05 queuedata.json
[2025-10-16 12:02:16] -rwx------ 1 boinc boinc     36292 Oct 16 02:08 runpilot2-wrapper.sh
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc       100 Oct 16 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 12:02:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 10:30 run_atlas
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc       105 Oct 16 10:30 job.xml
[2025-10-16 12:02:16] -rw-r--r-- 2 boinc boinc 227636894 Oct 16 10:30 EVNT.46771634._000259.pool.root.1
[2025-10-16 12:02:16] drwxrwx--x 2 boinc boinc      4096 Oct 16 10:30 shared
[2025-10-16 12:02:16] -rw-r--r-- 2 boinc boinc    569670 Oct 16 10:30 input.tar.gz
[2025-10-16 12:02:16] -rw-r--r-- 2 boinc boinc     15120 Oct 16 10:30 start_atlas.sh
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc         0 Oct 16 10:30 boinc_setup_complete
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc      6447 Oct 16 10:30 init_data.xml
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc         0 Oct 16 10:30 boinc_lockfile
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc      2552 Oct 16 10:30 pandaJob.out
[2025-10-16 12:02:16] -rw------- 1 boinc boinc    973627 Oct 16 10:31 agis_schedconf.cvmfs.json
[2025-10-16 12:02:16] -rw------- 1 boinc boinc   1560740 Oct 16 10:31 agis_ddmendpoints.agis.ALL.json
[2025-10-16 12:02:16] drwx------ 5 boinc boinc      4096 Oct 16 10:31 pilot3
[2025-10-16 12:02:16] -rw------- 1 boinc boinc 212418642 Oct 16 12:01 HITS.46771637._003948.pool.root.1
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc       529 Oct 16 12:01 boinc_task_state.xml
[2025-10-16 12:02:16] -rw------- 1 boinc boinc        95 Oct 16 12:01 pilot_heartbeat.json
[2025-10-16 12:02:16] -rw------- 1 boinc boinc      1018 Oct 16 12:01 memory_monitor_summary.json
[2025-10-16 12:02:16] -rw------- 1 boinc boinc    273387 Oct 16 12:01 log.46771637._003948.job.log.tgz.1
[2025-10-16 12:02:16] -rw------- 1 boinc boinc      7749 Oct 16 12:01 heartbeat.json
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc        27 Oct 16 12:01 wrapper_checkpoint.txt
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc      8192 Oct 16 12:01 boinc_mmap_file
[2025-10-16 12:02:16] -rw------- 1 boinc boinc       747 Oct 16 12:02 pilotlog.txt
[2025-10-16 12:02:16] -rw------- 1 boinc boinc    795138 Oct 16 12:02 log.46771637._003948.job.log.1
[2025-10-16 12:02:16] -rw------- 1 boinc boinc       357 Oct 16 12:02 output.list
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc       620 Oct 16 12:02 runtime_log
[2025-10-16 12:02:16] -rw------- 1 boinc boinc   1085440 Oct 16 12:02 result.tar.gz
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc      8782 Oct 16 12:02 runtime_log.err
[2025-10-16 12:02:16] -rw------- 1 boinc boinc       659 Oct 16 12:02 WryMDmKjQT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmi0WMDmoE6EXm.diag
[2025-10-16 12:02:16] -rw-r--r-- 1 boinc boinc      9618 Oct 16 12:02 stderr.txt
[2025-10-16 12:02:16] HITS file was successfully produced:
[2025-10-16 12:02:16] -rw------- 1 boinc boinc 212418642 Oct 16 12:01 shared/HITS.pool.root.1
[2025-10-16 12:02:16]  *** Contents of shared directory: ***
[2025-10-16 12:02:16] total 431392
[2025-10-16 12:02:16] -rw-r--r-- 2 boinc boinc 227636894 Oct 16 10:30 ATLAS.root_0
[2025-10-16 12:02:16] -rw-r--r-- 2 boinc boinc    569670 Oct 16 10:30 input.tar.gz
[2025-10-16 12:02:16] -rw-r--r-- 2 boinc boinc     15120 Oct 16 10:30 start_atlas.sh
[2025-10-16 12:02:16] -rw------- 1 boinc boinc 212418642 Oct 16 12:01 HITS.pool.root.1
[2025-10-16 12:02:16] -rw------- 1 boinc boinc   1085440 Oct 16 12:02 result.tar.gz
12:02:18 (3821642): run_atlas exited; CPU time 15587.002389
12:02:18 (3821642): called boinc_finish(0)

</stderr_txt>
]]>

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