Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:49:18 (18727): wrapper (7.7.26015): starting
15:49:18 (18727): wrapper: running run_atlas (--nthreads 8)
[2025-10-16 15:49:18] Arguments: --nthreads 8
[2025-10-16 15:49:18] Threads: 8
[2025-10-16 15:49:18] Checking for CVMFS
[2025-10-16 15:49:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 15:49:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 15:49:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 15:49:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 15:49:21] 2.11.2.0 25755 226430 140848 151776 0 60 24633644 25165824 4632 130560 0 129605685 99.881 69629774 3530 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-16 15:49:21] CVMFS is ok
[2025-10-16 15:49:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 15:49:21] Checking for apptainer binary...
[2025-10-16 15:49:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 15:49:21] Running /usr/bin/apptainer --version
[2025-10-16 15:49:21] apptainer version 1.3.2-1.el7
[2025-10-16 15:49:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 15:49:29] cg-vwn458.simple-grid.lan
[2025-10-16 15:49:29] apptainer works
[2025-10-16 15:49:29] Set ATHENA_PROC_NUMBER=8
[2025-10-16 15:49:29] Set ATHENA_CORE_NUMBER=8
[2025-10-16 15:49:30] Starting ATLAS job with PandaID=6846893761
[2025-10-16 15:49:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 20:12:46]  *** The last 200 lines of the pilot log: ***
[2025-10-16 20:12:46] 2025-10-16 18:12:08,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 20:12:46] 2025-10-16 18:12:08,560 | INFO     | fitting pss+swap vs Time
[2025-10-16 20:12:46] 2025-10-16 18:12:08,560 | INFO     | sum of square deviations: 4616114457.5
[2025-10-16 20:12:46] 2025-10-16 18:12:08,562 | INFO     | sum of deviations: 114765534230.5
[2025-10-16 20:12:46] 2025-10-16 18:12:08,562 | INFO     | mean x: 1760630720.5
[2025-10-16 20:12:46] 2025-10-16 18:12:08,563 | INFO     | mean y: 2439999.223577236
[2025-10-16 20:12:46] 2025-10-16 18:12:08,563 | INFO     | -- intersect: -43770245249.626236
[2025-10-16 20:12:46] 2025-10-16 18:12:08,563 | INFO     | intersect: -43770245249.626236
[2025-10-16 20:12:46] 2025-10-16 18:12:08,563 | INFO     | chi2: 5.770848714732453
[2025-10-16 20:12:46] 2025-10-16 18:12:08,564 | INFO     | sum of square deviations: 4340323240.0
[2025-10-16 20:12:46] 2025-10-16 18:12:08,565 | INFO     | sum of deviations: 128409273050.0
[2025-10-16 20:12:46] 2025-10-16 18:12:08,566 | INFO     | mean x: 1760630568.0
[2025-10-16 20:12:46] 2025-10-16 18:12:08,566 | INFO     | mean y: 2447393.4439834026
[2025-10-16 20:12:46] 2025-10-16 18:12:08,566 | INFO     | -- intersect: -52086136531.123024
[2025-10-16 20:12:46] 2025-10-16 18:12:08,566 | INFO     | intersect: -52086136531.123024
[2025-10-16 20:12:46] 2025-10-16 18:12:08,566 | INFO     | chi2: 5.02943237155185
[2025-10-16 20:12:46] 2025-10-16 18:12:08,566 | INFO     | current chi2=5.02943237155185 (change=12.847613580439814 %)
[2025-10-16 20:12:46] 2025-10-16 18:12:08,566 | INFO     | right removable region: 240
[2025-10-16 20:12:46] 2025-10-16 18:12:08,567 | INFO     | sum of square deviations: 4340323240.0
[2025-10-16 20:12:46] 2025-10-16 18:12:08,569 | INFO     | sum of deviations: 36063883993.00001
[2025-10-16 20:12:46] 2025-10-16 18:12:08,569 | INFO     | mean x: 1760630873.0
[2025-10-16 20:12:46] 2025-10-16 18:12:08,569 | INFO     | mean y: 2483454.410788382
[2025-10-16 20:12:46] 2025-10-16 18:12:08,569 | INFO     | -- intersect: -14626654526.189554
[2025-10-16 20:12:46] 2025-10-16 18:12:08,569 | INFO     | intersect: -14626654526.189554
[2025-10-16 20:12:46] 2025-10-16 18:12:08,570 | INFO     | chi2: 1.7550235902961584
[2025-10-16 20:12:46] 2025-10-16 18:12:08,570 | INFO     | current chi2=1.7550235902961584 (change=69.58811992739054 %)
[2025-10-16 20:12:46] 2025-10-16 18:12:08,570 | INFO     | sum of square deviations: 4075741535.0
[2025-10-16 20:12:46] 2025-10-16 18:12:08,575 | INFO     | sum of deviations: 2645051927.0000057
[2025-10-16 20:12:46] 2025-10-16 18:12:08,575 | INFO     | mean x: 1760631025.5
[2025-10-16 20:12:46] 2025-10-16 18:12:08,575 | INFO     | mean y: 2502577.6694915253
[2025-10-16 20:12:46] 2025-10-16 18:12:08,575 | INFO     | -- intersect: -1140101889.945448
[2025-10-16 20:12:46] 2025-10-16 18:12:08,576 | INFO     | intersect: -1140101889.945448
[2025-10-16 20:12:46] 2025-10-16 18:12:08,576 | INFO     | chi2: 0.8297285103585382
[2025-10-16 20:12:46] 2025-10-16 18:12:08,576 | INFO     | current chi2=0.8297285103585382 (change=52.722657692679654 %)
[2025-10-16 20:12:46] 2025-10-16 18:12:08,577 | INFO     | sum of square deviations: 3822136780.0
[2025-10-16 20:12:46] 2025-10-16 18:12:08,578 | INFO     | sum of deviations: -3604399842.0
[2025-10-16 20:12:46] 2025-10-16 18:12:08,578 | INFO     | mean x: 1760631178.0
[2025-10-16 20:12:46] 2025-10-16 18:12:08,579 | INFO     | mean y: 2506315.83982684
[2025-10-16 20:12:46] 2025-10-16 18:12:08,579 | INFO     | -- intersect: 1662839031.56317
[2025-10-16 20:12:46] 2025-10-16 18:12:08,579 | INFO     | intersect: 1662839031.56317
[2025-10-16 20:12:46] 2025-10-16 18:12:08,579 | INFO     | chi2: 0.8000895550681983
[2025-10-16 20:12:46] 2025-10-16 18:12:08,579 | INFO     | current chi2=0.8000895550681983 (change=3.5721268969692805 %)
[2025-10-16 20:12:46] 2025-10-16 18:12:08,579 | INFO     | left removable region: 30
[2025-10-16 20:12:46] 2025-10-16 18:12:08,580 | INFO     | sum of square deviations: 2871616632.5
[2025-10-16 20:12:46] 2025-10-16 18:12:08,581 | INFO     | sum of deviations: 7114169896.0
[2025-10-16 20:12:46] 2025-10-16 18:12:08,581 | INFO     | mean x: 1760631452.5
[2025-10-16 20:12:46] 2025-10-16 18:12:08,581 | INFO     | mean y: 2518615.8571428573
[2025-10-16 20:12:46] 2025-10-16 18:12:08,582 | INFO     | -- intersect: -4359286207.101326
[2025-10-16 20:12:46] 2025-10-16 18:12:08,582 | INFO     | intersect: -4359286207.101326
[2025-10-16 20:12:46] 2025-10-16 18:12:08,582 | INFO     | chi2: 0.0008304463472140472
[2025-10-16 20:12:46] 2025-10-16 18:12:08,582 | INFO     | -- intersect: -4359286207.101326
[2025-10-16 20:12:46] 2025-10-16 18:12:08,582 | INFO     | current memory leak: 2.48 B/s (using 210 data points, chi2=0.00)
[2025-10-16 20:12:46] 2025-10-16 18:12:08,583 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2025-10-16 20:12:46] 2025-10-16 18:12:08,586 | INFO     | ..............................
[2025-10-16 20:12:46] 2025-10-16 18:12:08,586 | INFO     | . Timing measurements:
[2025-10-16 20:12:46] 2025-10-16 18:12:08,587 | INFO     | . get job = 0 s
[2025-10-16 20:12:46] 2025-10-16 18:12:08,587 | INFO     | . initial setup = 7 s
[2025-10-16 20:12:46] 2025-10-16 18:12:08,587 | INFO     | . payload setup = 112 s
[2025-10-16 20:12:46] 2025-10-16 18:12:08,587 | INFO     | . stage-in = 0 s
[2025-10-16 20:12:46] 2025-10-16 18:12:08,587 | INFO     | . payload execution = 15125 s
[2025-10-16 20:12:46] 2025-10-16 18:12:08,587 | INFO     | . stage-out = 4 s
[2025-10-16 20:12:46] 2025-10-16 18:12:08,587 | INFO     | . log creation = 1 s
[2025-10-16 20:12:46] 2025-10-16 18:12:08,587 | INFO     | ..............................
[2025-10-16 20:12:46] 2025-10-16 18:12:08,638 | INFO     | time since job start (15547s) is within the limit (172800.0s)
[2025-10-16 20:12:46] 2025-10-16 18:12:09,111 | INFO     | 
[2025-10-16 20:12:46] 2025-10-16 18:12:09,111 | INFO     | job summary report
[2025-10-16 20:12:46] 2025-10-16 18:12:09,111 | INFO     | --------------------------------------------------
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | PanDA job id: 6846893761
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | task id: 46776533
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | errors: (none)
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | pilot state: finished 
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | transexitcode: 0
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | exeerrorcode: 0
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | exeerrordiag: 
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | exitcode: 0
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | exitmsg: OK
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | cpuconsumptiontime: 55788 s
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | nevents: 400
[2025-10-16 20:12:46] 2025-10-16 18:12:09,112 | INFO     | neventsw: 0
[2025-10-16 20:12:46] 2025-10-16 18:12:09,113 | INFO     | pid: 29045
[2025-10-16 20:12:46] 2025-10-16 18:12:09,113 | INFO     | pgrp: 29045
[2025-10-16 20:12:46] 2025-10-16 18:12:09,113 | INFO     | corecount: 8
[2025-10-16 20:12:46] 2025-10-16 18:12:09,113 | INFO     | event service: False
[2025-10-16 20:12:46] 2025-10-16 18:12:09,113 | INFO     | sizes: {0: 2348700, 1: 2348955, 12: 2348955, 23: 2348983, 34: 2349011, 44: 2349039, 55: 2349195, 66: 2349223, 76: 2349251, 87: 2349307, 98: 2349335, 99: 2349905, 1
[2025-10-16 20:12:46] 2025-10-16 18:12:09,113 | INFO     | --------------------------------------------------
[2025-10-16 20:12:46] 2025-10-16 18:12:09,113 | INFO     | 
[2025-10-16 20:12:46] 2025-10-16 18:12:09,113 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-10-16 20:12:46] 2025-10-16 18:12:09,739 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,739 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 20:12:46] 2025-10-16 18:12:09,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,741 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 20:12:46] 2025-10-16 18:12:09,741 | INFO     | job 6846893761 has completed (purged errors)
[2025-10-16 20:12:46] 2025-10-16 18:12:09,741 | INFO     | overall cleanup function is called
[2025-10-16 20:12:46] 2025-10-16 18:12:10,749 | INFO     | --- collectZombieJob: --- 10, [29045]
[2025-10-16 20:12:46] 2025-10-16 18:12:10,749 | INFO     | zombie collector waiting for pid 29045
[2025-10-16 20:12:46] 2025-10-16 18:12:10,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 20:12:46] 2025-10-16 18:12:10,750 | INFO     | collected zombie processes
[2025-10-16 20:12:46] 2025-10-16 18:12:10,750 | INFO     | will attempt to kill all subprocesses of pid=29045
[2025-10-16 20:12:46] 2025-10-16 18:12:10,888 | INFO     | process IDs to be killed: [29045] (in reverse order)
[2025-10-16 20:12:46] 2025-10-16 18:12:11,557 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 20:12:46] 2025-10-16 18:12:11,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 20:12:46] 2025-10-16 18:12:11,560 | INFO     | did not find any defunct processes belonging to 29045
[2025-10-16 20:12:46] 2025-10-16 18:12:11,563 | INFO     | did not find any defunct processes belonging to 29045
[2025-10-16 20:12:46] 2025-10-16 18:12:11,563 | INFO     | ready for new job
[2025-10-16 20:12:46] 2025-10-16 18:12:11,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 20:12:46] 2025-10-16 18:12:12,169 | INFO     | ***************************************
[2025-10-16 20:12:46] 2025-10-16 18:12:12,169 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 20:12:46] 2025-10-16 18:12:12,170 | INFO     | ***************************************
[2025-10-16 20:12:46] 2025-10-16 18:12:12,170 | INFO     | 
[2025-10-16 20:12:46] 2025-10-16 18:12:12,170 | INFO     | pilot is running in a VM
[2025-10-16 20:12:46] 2025-10-16 18:12:12,170 | INFO     | architecture information:
[2025-10-16 20:12:46] 2025-10-16 18:12:12,171 | INFO     | executing command: cat /etc/os-release
[2025-10-16 20:12:46] 2025-10-16 18:12:12,389 | INFO     | cat /etc/os-release:
[2025-10-16 20:12:46] NAME="CentOS Linux"
[2025-10-16 20:12:46] VERSION="7 (Core)"
[2025-10-16 20:12:46] ID="centos"
[2025-10-16 20:12:46] ID_LIKE="rhel fedora"
[2025-10-16 20:12:46] VERSION_ID="7"
[2025-10-16 20:12:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 20:12:46] ANSI_COLOR="0;31"
[2025-10-16 20:12:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 20:12:46] HOME_URL="https://www.centos.org/"
[2025-10-16 20:12:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 20:12:46] 
[2025-10-16 20:12:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 20:12:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 20:12:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 20:12:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 20:12:46] 
[2025-10-16 20:12:46] 2025-10-16 18:12:12,389 | INFO     | ***************************************
[2025-10-16 20:12:46] 2025-10-16 18:12:12,896 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-10-16 20:12:46] 2025-10-16 18:12:13,130 | INFO     | sufficient remaining disk space (495562260480 B)
[2025-10-16 20:12:46] 2025-10-16 18:12:13,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 20:12:46] 2025-10-16 18:12:13,130 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 20:12:46] 2025-10-16 18:12:13,130 | INFO     | update_server=False
[2025-10-16 20:12:46] 2025-10-16 18:12:13,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 20:12:46] 2025-10-16 18:12:13,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 20:12:46] 2025-10-16 18:12:13,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 20:12:46] 2025-10-16 18:12:13,137 | INFO     | aborting loop
[2025-10-16 20:12:46] 2025-10-16 18:12:13,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 20:12:46] 2025-10-16 18:12:13,874 | INFO     | all data control threads have been joined
[2025-10-16 20:12:46] 2025-10-16 18:12:14,136 | INFO     | [job] retrieve thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:14,143 | INFO     | [job] job monitor thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:14,225 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:14,304 | INFO     | all payload control threads have been joined
[2025-10-16 20:12:46] 2025-10-16 18:12:14,463 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:14,514 | INFO     | [payload] failed_post thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:14,654 | INFO     | [job] validate thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:14,666 | INFO     | [payload] validate_post thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:14,747 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:14,771 | INFO     | [job] queue monitor thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:14,815 | INFO     | all job control threads have been joined
[2025-10-16 20:12:46] 2025-10-16 18:12:14,880 | INFO     | [data] control thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:15,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:15,140 | INFO     | [data] copytool_out thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:15,283 | INFO     | [data] copytool_in thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:15,310 | INFO     | [payload] control thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:15,820 | INFO     | [job] control thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:16,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 20:12:46] 2025-10-16 18:12:20,512 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 20:12:46] 2025-10-16 18:12:27,698 | INFO     | [monitor] cgroup control has ended
[2025-10-16 20:12:46] 2025-10-16 18:12:28,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005046421312)>', '<ExcThread(monitor, started 140004743419648)>']
[2025-10-16 20:12:46] 2025-10-16 18:12:33,066 | INFO     | all workflow threads have been joined
[2025-10-16 20:12:46] 2025-10-16 18:12:33,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 20:12:46] 2025-10-16 18:12:33,067 | INFO     | traces error code: 0
[2025-10-16 20:12:46] 2025-10-16 18:12:33,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 20:12:46] 2025-10-16 18:12:41,805 | INFO     | PID=22495 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-16 20:12:46] 2025-10-16 18:12:41,805 | INFO     | .. there are 9 such processes running
[2025-10-16 20:12:46] 2025-10-16 18:12:41,805 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 20:12:46] 2025-10-16 18:12:41,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 20:12:46] 2025-10-16 18:12:41,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 20:12:46] 2025-10-16 18:12:41,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 20:12:46] 2025-10-16 18:12:41,806 | INFO     | [monitor] control thread has ended
[2025-10-16 20:12:46] 2025-10-16 18:12:42,085 [wrapper] ==== pilot stdout END ====
[2025-10-16 20:12:46] 2025-10-16 18:12:42,134 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 20:12:46] 2025-10-16 18:12:42,173 [wrapper] pilotpid: 22495
[2025-10-16 20:12:46] 2025-10-16 18:12:42,248 [wrapper] Pilot exit status: 0
[2025-10-16 20:12:46] 2025-10-16 18:12:42,596 [wrapper] pandaids: 6846893761
[2025-10-16 20:12:46] 2025-10-16 18:12:43,332 [wrapper] cleanup supervisor_pilot  6542 22496
[2025-10-16 20:12:46] 2025-10-16 18:12:43,441 [wrapper] Test setup, not cleaning
[2025-10-16 20:12:46] 2025-10-16 18:12:43,491 [wrapper] apfmon messages muted
[2025-10-16 20:12:46] 2025-10-16 18:12:43,577 [wrapper] ==== wrapper stdout END ====
[2025-10-16 20:12:46] 2025-10-16 18:12:43,628 [wrapper] ==== wrapper stderr END ====
[2025-10-16 20:12:46]  *** Error codes and diagnostics ***
[2025-10-16 20:12:46]     "exeErrorCode": 0,
[2025-10-16 20:12:46]     "exeErrorDiag": "",
[2025-10-16 20:12:46]     "pilotErrorCode": 0,
[2025-10-16 20:12:46]     "pilotErrorDiag": "",
[2025-10-16 20:12:46]  *** Listing of results directory ***
[2025-10-16 20:12:46] total 438444
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc    557409 Oct 16 04:36 pilot3.tar.gz
[2025-10-16 20:12:46] -rwx------. 1 boinc boinc     36292 Oct 16 05:09 runpilot2-wrapper.sh
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc      5112 Oct 16 05:09 queuedata.json
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc       100 Oct 16 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 20:12:46] -rwxr-xr-x. 1 boinc boinc      7986 Oct 16 15:49 run_atlas
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc       105 Oct 16 15:49 job.xml
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc      6391 Oct 16 15:49 init_data.xml
[2025-10-16 20:12:46] -rw-r--r--. 2 boinc boinc 228451954 Oct 16 15:49 EVNT.46776529._000128.pool.root.1
[2025-10-16 20:12:46] -rw-r--r--. 2 boinc boinc     15120 Oct 16 15:49 start_atlas.sh
[2025-10-16 20:12:46] drwxrwx--x. 2 boinc boinc        68 Oct 16 15:49 shared
[2025-10-16 20:12:46] -rw-r--r--. 2 boinc boinc    569680 Oct 16 15:49 input.tar.gz
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc         0 Oct 16 15:49 boinc_lockfile
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc      2558 Oct 16 15:49 pandaJob.out
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc    976761 Oct 16 15:52 agis_schedconf.cvmfs.json
[2025-10-16 20:12:46] drwx------. 5 boinc boinc      4096 Oct 16 15:53 pilot3
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc 211508473 Oct 16 20:09 HITS.46776533._008216.pool.root.1
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc       531 Oct 16 20:09 boinc_task_state.xml
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc      1016 Oct 16 20:10 memory_monitor_summary.json
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc   1560740 Oct 16 20:10 agis_ddmendpoints.agis.ALL.json
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc    463952 Oct 16 20:10 log.46776533._008216.job.log.tgz.1
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc        95 Oct 16 20:11 pilot_heartbeat.json
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc      7775 Oct 16 20:12 heartbeat.json
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc       820 Oct 16 20:12 pilotlog.txt
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc      8192 Oct 16 20:12 boinc_mmap_file
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc        28 Oct 16 20:12 wrapper_checkpoint.txt
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc   2096956 Oct 16 20:12 log.46776533._008216.job.log.1
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc       357 Oct 16 20:12 output.list
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc       620 Oct 16 20:12 runtime_log
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc   2580480 Oct 16 20:12 result.tar.gz
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc       657 Oct 16 20:12 XnHLDmiXTT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrHpNDmXPEV5m.diag
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc      8717 Oct 16 20:12 runtime_log.err
[2025-10-16 20:12:46] -rw-r--r--. 1 boinc boinc     20628 Oct 16 20:12 stderr.txt
[2025-10-16 20:12:46] HITS file was successfully produced:
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc 211508473 Oct 16 20:09 shared/HITS.pool.root.1
[2025-10-16 20:12:46]  *** Contents of shared directory: ***
[2025-10-16 20:12:46] total 432748
[2025-10-16 20:12:46] -rw-r--r--. 2 boinc boinc 228451954 Oct 16 15:49 ATLAS.root_0
[2025-10-16 20:12:46] -rw-r--r--. 2 boinc boinc     15120 Oct 16 15:49 start_atlas.sh
[2025-10-16 20:12:46] -rw-r--r--. 2 boinc boinc    569680 Oct 16 15:49 input.tar.gz
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc 211508473 Oct 16 20:09 HITS.pool.root.1
[2025-10-16 20:12:46] -rw-------. 1 boinc boinc   2580480 Oct 16 20:12 result.tar.gz
20:12:47 (18727): run_atlas exited; CPU time 55985.853725
20:12:47 (18727): called boinc_finish(0)

</stderr_txt>
]]>

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