Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:00 (3565507): wrapper (7.7.26015): starting
00:02:00 (3565507): wrapper: running run_atlas (--nthreads 9)
[2025-10-16 00:02:00] Arguments: --nthreads 9
[2025-10-16 00:02:00] Threads: 9
[2025-10-16 00:02:00] Checking for CVMFS
[2025-10-16 00:02:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 00:02:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 00:02:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 00:02:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 00:02:03] 2.13.2.0 1756961 99681 314140 151758 0 498 31594539 32935937 21769 16776704 0 126604791 99.709 97078737 29506 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-16 00:02:03] CVMFS is ok
[2025-10-16 00:02:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 00:02:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 00:02:03] Further information can be found at the LHC@home message board.
[2025-10-16 00:02:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 00:02:03] Checking for apptainer binary...
[2025-10-16 00:02:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 00:02:03] Running /usr/bin/apptainer --version
[2025-10-16 00:02:03] apptainer version 1.4.3-1.el9
[2025-10-16 00:02:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 00:02:04] c-5-5.aglt2.org
[2025-10-16 00:02:04] apptainer works
[2025-10-16 00:02:04] Set ATHENA_PROC_NUMBER=9
[2025-10-16 00:02:04] Set ATHENA_CORE_NUMBER=9
[2025-10-16 00:02:05] Starting ATLAS job with PandaID=6846776019
[2025-10-16 00:02:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 14:15:20]  *** The last 200 lines of the pilot log: ***
[2025-10-16 14:15:20] 2025-10-16 18:14:21,912 | INFO     | time since job start (51032s) is within the limit (172800.0s)
[2025-10-16 14:15:20] 2025-10-16 18:14:22,012 | INFO     | monitor loop #2396: job 0:6846776019 is in state 'finished'
[2025-10-16 14:15:20] 2025-10-16 18:14:22,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 14:15:20] 2025-10-16 18:14:22,410 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-16 14:15:20] 2025-10-16 18:14:22,455 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1553750000003
[2025-10-16 14:15:20] 2025-10-16 18:14:22,480 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6846776019/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 14:15:20] 2025-10-16 18:14:22,481 | INFO     | extracted standard info from prmon json
[2025-10-16 14:15:20] 2025-10-16 18:14:22,484 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 14:15:20] 2025-10-16 18:14:22,484 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 14:15:20] 2025-10-16 18:14:22,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 14:15:20] 2025-10-16 18:14:22,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 14:15:20] 2025-10-16 18:14:22,598 | INFO     | fitting pss+swap vs Time
[2025-10-16 14:15:20] 2025-10-16 18:14:22,600 | INFO     | sum of square deviations: 178576825890.42188
[2025-10-16 14:15:20] 2025-10-16 18:14:22,671 | INFO     | sum of deviations: 827716146169.9683
[2025-10-16 14:15:20] 2025-10-16 18:14:22,671 | INFO     | mean x: 1760613025.171875
[2025-10-16 14:15:20] 2025-10-16 18:14:22,671 | INFO     | mean y: 2087522.391826923
[2025-10-16 14:15:20] 2025-10-16 18:14:22,671 | INFO     | -- intersect: -8158477661.951484
[2025-10-16 14:15:20] 2025-10-16 18:14:22,672 | INFO     | intersect: -8158477661.951484
[2025-10-16 14:15:20] 2025-10-16 18:14:22,673 | INFO     | chi2: 7.089994323285821
[2025-10-16 14:15:20] 2025-10-16 18:14:22,674 | INFO     | sum of square deviations: 175376601493.15137
[2025-10-16 14:15:20] 2025-10-16 18:14:22,705 | INFO     | sum of deviations: 889380805116.3724
[2025-10-16 14:15:20] 2025-10-16 18:14:22,706 | INFO     | mean x: 1760612872.6759372
[2025-10-16 14:15:20] 2025-10-16 18:14:22,706 | INFO     | mean y: 2090451.7775090688
[2025-10-16 14:15:20] 2025-10-16 18:14:22,706 | INFO     | -- intersect: -8926439813.19015
[2025-10-16 14:15:20] 2025-10-16 18:14:22,706 | INFO     | intersect: -8926439813.19015
[2025-10-16 14:15:20] 2025-10-16 18:14:22,707 | INFO     | chi2: 6.343090559525209
[2025-10-16 14:15:20] 2025-10-16 18:14:22,707 | INFO     | current chi2=6.343090559525209 (change=10.534617232450238 %)
[2025-10-16 14:15:20] 2025-10-16 18:14:22,708 | INFO     | right removable region: 826
[2025-10-16 14:15:20] 2025-10-16 18:14:22,709 | INFO     | sum of square deviations: 175376361763.84973
[2025-10-16 14:15:20] 2025-10-16 18:14:22,728 | INFO     | sum of deviations: 635280390746.3491
[2025-10-16 14:15:20] 2025-10-16 18:14:22,728 | INFO     | mean x: 1760613177.6735187
[2025-10-16 14:15:20] 2025-10-16 18:14:22,728 | INFO     | mean y: 2096683.938331318
[2025-10-16 14:15:20] 2025-10-16 18:14:22,728 | INFO     | -- intersect: -6375518954.888068
[2025-10-16 14:15:20] 2025-10-16 18:14:22,728 | INFO     | intersect: -6375518954.888068
[2025-10-16 14:15:20] 2025-10-16 18:14:22,730 | INFO     | chi2: 4.2458559889272625
[2025-10-16 14:15:20] 2025-10-16 18:14:22,730 | INFO     | current chi2=4.2458559889272625 (change=40.11481821667323 %)
[2025-10-16 14:15:20] 2025-10-16 18:14:22,731 | INFO     | sum of square deviations: 172214464735.46957
[2025-10-16 14:15:20] 2025-10-16 18:14:22,767 | INFO     | sum of deviations: 523552526756.6774
[2025-10-16 14:15:20] 2025-10-16 18:14:22,767 | INFO     | mean x: 1760613330.1727493
[2025-10-16 14:15:20] 2025-10-16 18:14:22,767 | INFO     | mean y: 2102073.798053528
[2025-10-16 14:15:20] 2025-10-16 18:14:22,767 | INFO     | -- intersect: -5350372580.80964
[2025-10-16 14:15:20] 2025-10-16 18:14:22,767 | INFO     | intersect: -5350372580.80964
[2025-10-16 14:15:20] 2025-10-16 18:14:22,773 | INFO     | chi2: 3.4039056650250443
[2025-10-16 14:15:20] 2025-10-16 18:14:22,773 | INFO     | current chi2=3.4039056650250443 (change=19.829931257629426 %)
[2025-10-16 14:15:20] 2025-10-16 18:14:22,773 | INFO     | left removable region: 20
[2025-10-16 14:15:20] 2025-10-16 18:14:22,774 | INFO     | sum of square deviations: 162352286130.33362
[2025-10-16 14:15:20] 2025-10-16 18:14:22,839 | INFO     | sum of deviations: 377365795849.9575
[2025-10-16 14:15:20] 2025-10-16 18:14:22,840 | INFO     | mean x: 1760613452.174938
[2025-10-16 14:15:20] 2025-10-16 18:14:22,840 | INFO     | mean y: 2115493.1563275433
[2025-10-16 14:15:20] 2025-10-16 18:14:22,845 | INFO     | -- intersect: -4090190888.23193
[2025-10-16 14:15:20] 2025-10-16 18:14:22,845 | INFO     | intersect: -4090190888.23193
[2025-10-16 14:15:20] 2025-10-16 18:14:22,847 | INFO     | chi2: 1.1613692426899247
[2025-10-16 14:15:20] 2025-10-16 18:14:22,847 | INFO     | -- intersect: -4090190888.23193
[2025-10-16 14:15:20] 2025-10-16 18:14:22,847 | INFO     | current memory leak: 2.32 B/s (using 806 data points, chi2=1.16)
[2025-10-16 14:15:20] 2025-10-16 18:14:22,848 | INFO     | could have reported an average CPU frequency of 2600 MHz (31 samples)
[2025-10-16 14:15:20] 2025-10-16 18:14:22,849 | INFO     | ..............................
[2025-10-16 14:15:20] 2025-10-16 18:14:22,849 | INFO     | . Timing measurements:
[2025-10-16 14:15:20] 2025-10-16 18:14:22,849 | INFO     | . get job = 1 s
[2025-10-16 14:15:20] 2025-10-16 18:14:22,849 | INFO     | . initial setup = 11 s
[2025-10-16 14:15:20] 2025-10-16 18:14:22,849 | INFO     | . payload setup = 73 s
[2025-10-16 14:15:20] 2025-10-16 18:14:22,849 | INFO     | . stage-in = 2 s
[2025-10-16 14:15:20] 2025-10-16 18:14:22,849 | INFO     | . payload execution = 50789 s
[2025-10-16 14:15:20] 2025-10-16 18:14:22,850 | INFO     | . stage-out = 6 s
[2025-10-16 14:15:20] 2025-10-16 18:14:22,850 | INFO     | . log creation = 1 s
[2025-10-16 14:15:20] 2025-10-16 18:14:22,850 | INFO     | ..............................
[2025-10-16 14:15:20] 2025-10-16 18:14:22,983 | INFO     | 
[2025-10-16 14:15:20] 2025-10-16 18:14:22,984 | INFO     | job summary report
[2025-10-16 14:15:20] 2025-10-16 18:14:22,984 | INFO     | --------------------------------------------------
[2025-10-16 14:15:20] 2025-10-16 18:14:22,984 | INFO     | PanDA job id: 6846776019
[2025-10-16 14:15:20] 2025-10-16 18:14:22,984 | INFO     | task id: 46771637
[2025-10-16 14:15:20] 2025-10-16 18:14:22,984 | INFO     | errors: (none)
[2025-10-16 14:15:20] 2025-10-16 18:14:22,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 14:15:20] 2025-10-16 18:14:22,984 | INFO     | pilot state: finished 
[2025-10-16 14:15:20] 2025-10-16 18:14:22,984 | INFO     | transexitcode: 0
[2025-10-16 14:15:20] 2025-10-16 18:14:22,984 | INFO     | exeerrorcode: 0
[2025-10-16 14:15:20] 2025-10-16 18:14:22,985 | INFO     | exeerrordiag: 
[2025-10-16 14:15:20] 2025-10-16 18:14:22,985 | INFO     | exitcode: 0
[2025-10-16 14:15:20] 2025-10-16 18:14:22,985 | INFO     | exitmsg: OK
[2025-10-16 14:15:20] 2025-10-16 18:14:22,985 | INFO     | cpuconsumptiontime: 53810 s
[2025-10-16 14:15:20] 2025-10-16 18:14:22,985 | INFO     | nevents: 400
[2025-10-16 14:15:20] 2025-10-16 18:14:22,985 | INFO     | neventsw: 0
[2025-10-16 14:15:20] 2025-10-16 18:14:22,985 | INFO     | pid: 3595527
[2025-10-16 14:15:20] 2025-10-16 18:14:22,985 | INFO     | pgrp: 3595527
[2025-10-16 14:15:20] 2025-10-16 18:14:22,985 | INFO     | corecount: 9
[2025-10-16 14:15:20] 2025-10-16 18:14:22,985 | INFO     | event service: False
[2025-10-16 14:15:20] 2025-10-16 18:14:22,986 | INFO     | sizes: {0: 2348091, 1: 2348776, 2: 2348776, 4: 2349003, 5: 2349003, 17: 2349059, 29: 2349215, 41: 2349243, 54: 2349271, 62: 2349561, 66: 2349589, 50867: 2395571, 5
[2025-10-16 14:15:20] 2025-10-16 18:14:22,986 | INFO     | --------------------------------------------------
[2025-10-16 14:15:20] 2025-10-16 18:14:22,986 | INFO     | 
[2025-10-16 14:15:20] 2025-10-16 18:14:22,986 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-16 14:15:20] 2025-10-16 18:14:23,034 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,035 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 14:15:20] 2025-10-16 18:14:23,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 14:15:20] 2025-10-16 18:14:23,036 | INFO     | job 6846776019 has completed (purged errors)
[2025-10-16 14:15:20] 2025-10-16 18:14:23,036 | INFO     | overall cleanup function is called
[2025-10-16 14:15:20] 2025-10-16 18:14:24,044 | INFO     | --- collectZombieJob: --- 10, [3595527]
[2025-10-16 14:15:20] 2025-10-16 18:14:24,044 | INFO     | zombie collector waiting for pid 3595527
[2025-10-16 14:15:20] 2025-10-16 18:14:24,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 14:15:20] 2025-10-16 18:14:24,045 | INFO     | collected zombie processes
[2025-10-16 14:15:20] 2025-10-16 18:14:24,045 | INFO     | will attempt to kill all subprocesses of pid=3595527
[2025-10-16 14:15:20] 2025-10-16 18:14:24,665 | INFO     | process IDs to be killed: [3595527] (in reverse order)
[2025-10-16 14:15:20] 2025-10-16 18:14:25,022 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 14:15:20] 2025-10-16 18:14:25,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 14:15:20] 2025-10-16 18:14:25,040 | INFO     | did not find any defunct processes belonging to 3595527
[2025-10-16 14:15:20] 2025-10-16 18:14:25,056 | INFO     | did not find any defunct processes belonging to 3595527
[2025-10-16 14:15:20] 2025-10-16 18:14:25,056 | INFO     | ready for new job
[2025-10-16 14:15:20] 2025-10-16 18:14:25,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 14:15:20] 2025-10-16 18:14:25,060 | INFO     | ***************************************
[2025-10-16 14:15:20] 2025-10-16 18:14:25,061 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 14:15:20] 2025-10-16 18:14:25,061 | INFO     | ***************************************
[2025-10-16 14:15:20] 2025-10-16 18:14:25,061 | INFO     | 
[2025-10-16 14:15:20] 2025-10-16 18:14:25,076 | INFO     | architecture information:
[2025-10-16 14:15:20] 2025-10-16 18:14:25,081 | INFO     | executing command: cat /etc/os-release
[2025-10-16 14:15:20] 2025-10-16 18:14:25,158 | INFO     | cat /etc/os-release:
[2025-10-16 14:15:20] NAME="CentOS Linux"
[2025-10-16 14:15:20] VERSION="7 (Core)"
[2025-10-16 14:15:20] ID="centos"
[2025-10-16 14:15:20] ID_LIKE="rhel fedora"
[2025-10-16 14:15:20] VERSION_ID="7"
[2025-10-16 14:15:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 14:15:20] ANSI_COLOR="0;31"
[2025-10-16 14:15:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 14:15:20] HOME_URL="https://www.centos.org/"
[2025-10-16 14:15:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 14:15:20] 
[2025-10-16 14:15:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 14:15:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 14:15:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 14:15:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 14:15:20] 
[2025-10-16 14:15:20] 2025-10-16 18:14:25,159 | INFO     | ***************************************
[2025-10-16 14:15:20] 2025-10-16 18:14:25,662 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-16 14:15:20] 2025-10-16 18:14:25,687 | INFO     | sufficient remaining disk space (75714527232 B)
[2025-10-16 14:15:20] 2025-10-16 18:14:25,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 14:15:20] 2025-10-16 18:14:25,688 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 14:15:20] 2025-10-16 18:14:25,688 | INFO     | update_server=False
[2025-10-16 14:15:20] 2025-10-16 18:14:25,688 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 14:15:20] 2025-10-16 18:14:25,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 14:15:20] 2025-10-16 18:14:25,689 | INFO     | aborting loop
[2025-10-16 14:15:20] 2025-10-16 18:14:25,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 14:15:20] 2025-10-16 18:14:25,759 | INFO     | all job control threads have been joined
[2025-10-16 14:15:20] 2025-10-16 18:14:25,839 | INFO     | all data control threads have been joined
[2025-10-16 14:15:20] 2025-10-16 18:14:26,536 | INFO     | all payload control threads have been joined
[2025-10-16 14:15:20] 2025-10-16 18:14:26,711 | INFO     | [job] retrieve thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:26,712 | INFO     | [job] job monitor thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:26,766 | INFO     | [job] control thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:26,845 | INFO     | [data] control thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:27,476 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:27,542 | INFO     | [payload] control thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:27,547 | INFO     | [job] validate thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:27,548 | INFO     | [data] copytool_in thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:27,549 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:27,696 | INFO     | [data] copytool_out thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:27,729 | INFO     | [payload] failed_post thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:27,763 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:28,001 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 14:15:20] 2025-10-16 18:14:28,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:28,312 | INFO     | [payload] validate_post thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:28,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 14:15:20] 2025-10-16 18:14:29,008 | INFO     | [job] queue monitor thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:30,513 | INFO     | [monitor] cgroup control has ended
[2025-10-16 14:15:20] 2025-10-16 18:14:32,685 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 14:15:20] 2025-10-16 18:14:32,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912670828352)>', '<ExcThread(monitor, started 139911873144576)>']
[2025-10-16 14:15:20] 2025-10-16 18:14:37,947 | INFO     | all workflow threads have been joined
[2025-10-16 14:15:20] 2025-10-16 18:14:37,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 14:15:20] 2025-10-16 18:14:37,948 | INFO     | traces error code: 0
[2025-10-16 14:15:20] 2025-10-16 18:14:37,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 14:15:20] 2025-10-16 18:14:57,057 | INFO     | PID=3572997 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-16 14:15:20] 2025-10-16 18:14:57,057 | INFO     | .. there are 33 such processes running
[2025-10-16 14:15:20] 2025-10-16 18:14:57,058 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 14:15:20] 2025-10-16 18:14:57,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 14:15:20] 2025-10-16 18:14:57,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 14:15:20] 2025-10-16 18:14:57,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 14:15:20] 2025-10-16 18:14:57,058 | INFO     | [monitor] control thread has ended
[2025-10-16 14:15:20] 2025-10-16 18:14:58,314 [wrapper] ==== pilot stdout END ====
[2025-10-16 14:15:20] 2025-10-16 18:14:58,349 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 14:15:20] 2025-10-16 18:14:58,388 [wrapper] pilotpid: 3572997
[2025-10-16 14:15:20] 2025-10-16 18:14:58,455 [wrapper] Pilot exit status: 0
[2025-10-16 14:15:20] 2025-10-16 18:14:58,620 [wrapper] pandaids: 6846776019
[2025-10-16 14:15:20] 2025-10-16 18:14:59,306 [wrapper] cleanup supervisor_pilot 2076146 3572998
[2025-10-16 14:15:20] 2025-10-16 18:14:59,369 [wrapper] Test setup, not cleaning
[2025-10-16 14:15:20] 2025-10-16 18:14:59,474 [wrapper] apfmon messages muted
[2025-10-16 14:15:20] 2025-10-16 18:14:59,488 [wrapper] ==== wrapper stdout END ====
[2025-10-16 14:15:20] 2025-10-16 18:14:59,519 [wrapper] ==== wrapper stderr END ====
[2025-10-16 14:15:20]  *** Error codes and diagnostics ***
[2025-10-16 14:15:20]     "exeErrorCode": 0,
[2025-10-16 14:15:20]     "exeErrorDiag": "",
[2025-10-16 14:15:20]     "pilotErrorCode": 0,
[2025-10-16 14:15:20]     "pilotErrorDiag": "",
[2025-10-16 14:15:20]  *** Listing of results directory ***
[2025-10-16 14:15:20] total 444272
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas    557409 Oct 15 20:32 pilot3.tar.gz
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 15 20:46 queuedata.json
[2025-10-16 14:15:20] -rwx------. 1 boincer umatlas     36292 Oct 15 20:47 runpilot2-wrapper.sh
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas       100 Oct 16 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 14:15:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 16 00:01 run_atlas
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas       105 Oct 16 00:01 job.xml
[2025-10-16 14:15:20] -rw-r--r--. 2 boincer umatlas 228471640 Oct 16 00:02 EVNT.46771634._000040.pool.root.1
[2025-10-16 14:15:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 16 00:02 shared
[2025-10-16 14:15:20] -rw-r--r--. 2 boincer umatlas    569675 Oct 16 00:02 input.tar.gz
[2025-10-16 14:15:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 16 00:02 start_atlas.sh
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas         0 Oct 16 00:02 boinc_lockfile
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas      2552 Oct 16 00:02 pandaJob.out
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas    974318 Oct 16 00:03 agis_schedconf.cvmfs.json
[2025-10-16 14:15:20] drwx------. 5 boincer umatlas      4096 Oct 16 00:03 pilot3
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas      6659 Oct 16 14:12 init_data.xml
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas 210027373 Oct 16 14:12 HITS.46771637._005330.pool.root.1
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas       531 Oct 16 14:12 boinc_task_state.xml
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas      1042 Oct 16 14:13 memory_monitor_summary.json
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas   1560740 Oct 16 14:13 agis_ddmendpoints.agis.ALL.json
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas    867173 Oct 16 14:13 log.46771637._005330.job.log.tgz.1
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas      7821 Oct 16 14:14 heartbeat.json
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas        95 Oct 16 14:14 pilot_heartbeat.json
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas       823 Oct 16 14:14 pilotlog.txt
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas   5398935 Oct 16 14:14 log.46771637._005330.job.log.1
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas       357 Oct 16 14:15 output.list
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas       620 Oct 16 14:15 runtime_log
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas   6287360 Oct 16 14:15 result.tar.gz
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas      8689 Oct 16 14:15 runtime_log.err
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas       655 Oct 16 14:15 nUXKDm4KRT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUmoNDmNUANmm.diag
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 16 14:15 boinc_mmap_file
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas        28 Oct 16 14:15 wrapper_checkpoint.txt
[2025-10-16 14:15:20] -rw-r--r--. 1 boincer umatlas     21243 Oct 16 14:15 stderr.txt
[2025-10-16 14:15:20] HITS file was successfully produced:
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas 210027373 Oct 16 14:12 shared/HITS.pool.root.1
[2025-10-16 14:15:20]  *** Contents of shared directory: ***
[2025-10-16 14:15:20] total 434952
[2025-10-16 14:15:20] -rw-r--r--. 2 boincer umatlas 228471640 Oct 16 00:02 ATLAS.root_0
[2025-10-16 14:15:20] -rw-r--r--. 2 boincer umatlas    569675 Oct 16 00:02 input.tar.gz
[2025-10-16 14:15:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 16 00:02 start_atlas.sh
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas 210027373 Oct 16 14:12 HITS.pool.root.1
[2025-10-16 14:15:20] -rw-------. 1 boincer umatlas   6287360 Oct 16 14:15 result.tar.gz
14:15:22 (3565507): run_atlas exited; CPU time 55864.692275
14:15:22 (3565507): called boinc_finish(0)

</stderr_txt>
]]>

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