Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:09:09 (13237): wrapper (7.7.26015): starting
23:09:09 (13237): wrapper: running run_atlas (--nthreads 8)
[2025-10-15 23:09:09] Arguments: --nthreads 8
[2025-10-15 23:09:09] Threads: 8
[2025-10-15 23:09:09] Checking for CVMFS
[2025-10-15 23:09:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 23:09:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 23:09:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 23:09:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 23:09:09] 2.11.4.0 5420 58065 61368 151756 0 82 11292140 18432000 1024 130560 0 51234480 99.975 2563996 38446 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-15 23:09:09] CVMFS is ok
[2025-10-15 23:09:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 23:09:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 23:09:09] Further information can be found at the LHC@home message board.
[2025-10-15 23:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 23:09:09] Checking for apptainer binary...
[2025-10-15 23:09:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 23:09:09] Running /usr/bin/apptainer --version
[2025-10-15 23:09:09] apptainer version 1.3.2-1.el7
[2025-10-15 23:09:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 23:09:10] c-206-22.aglt2.org
[2025-10-15 23:09:10] apptainer works
[2025-10-15 23:09:10] Set ATHENA_PROC_NUMBER=8
[2025-10-15 23:09:10] Set ATHENA_CORE_NUMBER=8
[2025-10-15 23:09:10] Starting ATLAS job with PandaID=6846701972
[2025-10-15 23:09:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 02:27:45]  *** The last 200 lines of the pilot log: ***
[2025-10-16 02:27:45] 2025-10-16 06:26:38,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 02:27:45] 2025-10-16 06:26:38,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 02:27:45] 2025-10-16 06:26:38,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 02:27:45] 2025-10-16 06:26:38,703 | INFO     | fitting pss+swap vs Time
[2025-10-16 02:27:45] 2025-10-16 06:26:38,704 | INFO     | sum of square deviations: 2263977332.5
[2025-10-16 02:27:45] 2025-10-16 06:26:38,705 | INFO     | sum of deviations: 22348224679.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,706 | INFO     | mean x: 1760590070.5
[2025-10-16 02:27:45] 2025-10-16 06:26:38,706 | INFO     | mean y: 2459925.206185567
[2025-10-16 02:27:45] 2025-10-16 06:26:38,706 | INFO     | -- intersect: -17376716932.40948
[2025-10-16 02:27:45] 2025-10-16 06:26:38,706 | INFO     | intersect: -17376716932.40948
[2025-10-16 02:27:45] 2025-10-16 06:26:38,707 | INFO     | chi2: 2.0693032356766463
[2025-10-16 02:27:45] 2025-10-16 06:26:38,707 | INFO     | sum of square deviations: 2093397390.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,709 | INFO     | sum of deviations: 34956034384.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,709 | INFO     | mean x: 1760589918.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,709 | INFO     | mean y: 2470945.1322751325
[2025-10-16 02:27:45] 2025-10-16 06:26:38,709 | INFO     | -- intersect: -29396267203.543713
[2025-10-16 02:27:45] 2025-10-16 06:26:38,709 | INFO     | intersect: -29396267203.543713
[2025-10-16 02:27:45] 2025-10-16 06:26:38,710 | INFO     | chi2: 1.2101370691838418
[2025-10-16 02:27:45] 2025-10-16 06:26:38,710 | INFO     | current chi2=1.2101370691838418 (change=41.51958744760111 %)
[2025-10-16 02:27:45] 2025-10-16 06:26:38,711 | INFO     | sum of square deviations: 1931608310.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,712 | INFO     | sum of deviations: 33827058126.5
[2025-10-16 02:27:45] 2025-10-16 06:26:38,712 | INFO     | mean x: 1760589765.5
[2025-10-16 02:27:45] 2025-10-16 06:26:38,713 | INFO     | mean y: 2469880.538043478
[2025-10-16 02:27:45] 2025-10-16 06:26:38,713 | INFO     | -- intersect: -30829646561.583447
[2025-10-16 02:27:45] 2025-10-16 06:26:38,713 | INFO     | intersect: -30829646561.583447
[2025-10-16 02:27:45] 2025-10-16 06:26:38,713 | INFO     | chi2: 1.2101728846255406
[2025-10-16 02:27:45] 2025-10-16 06:26:38,714 | INFO     | current chi2=1.2101728846255406 (change=-0.0029596185928750978 %)
[2025-10-16 02:27:45] 2025-10-16 06:26:38,714 | INFO     | right removable region: 183
[2025-10-16 02:27:45] 2025-10-16 06:26:38,714 | INFO     | sum of square deviations: 2093397390.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,716 | INFO     | sum of deviations: -2803661991.999996
[2025-10-16 02:27:45] 2025-10-16 06:26:38,716 | INFO     | mean x: 1760590223.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,716 | INFO     | mean y: 2482134.777777778
[2025-10-16 02:27:45] 2025-10-16 06:26:38,716 | INFO     | -- intersect: 2360419483.554112
[2025-10-16 02:27:45] 2025-10-16 06:26:38,717 | INFO     | intersect: 2360419483.554112
[2025-10-16 02:27:45] 2025-10-16 06:26:38,717 | INFO     | chi2: 0.8948099365051779
[2025-10-16 02:27:45] 2025-10-16 06:26:38,717 | INFO     | current chi2=0.8948099365051779 (change=56.757911499974924 %)
[2025-10-16 02:27:45] 2025-10-16 06:26:38,718 | INFO     | sum of square deviations: 1931608310.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,719 | INFO     | sum of deviations: -5811278856.499999
[2025-10-16 02:27:45] 2025-10-16 06:26:38,719 | INFO     | mean x: 1760590375.5
[2025-10-16 02:27:45] 2025-10-16 06:26:38,720 | INFO     | mean y: 2484943.722826087
[2025-10-16 02:27:45] 2025-10-16 06:26:38,720 | INFO     | -- intersect: 5299253222.846943
[2025-10-16 02:27:45] 2025-10-16 06:26:38,720 | INFO     | intersect: 5299253222.846943
[2025-10-16 02:27:45] 2025-10-16 06:26:38,720 | INFO     | chi2: 0.8793657563579035
[2025-10-16 02:27:45] 2025-10-16 06:26:38,721 | INFO     | current chi2=0.8793657563579035 (change=1.72597325054236 %)
[2025-10-16 02:27:45] 2025-10-16 06:26:38,721 | INFO     | left removable region: 20
[2025-10-16 02:27:45] 2025-10-16 06:26:38,721 | INFO     | sum of square deviations: 1342841922.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,722 | INFO     | sum of deviations: 4368998059.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,723 | INFO     | mean x: 1760590345.0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,723 | INFO     | mean y: 2499228.1165644173
[2025-10-16 02:27:45] 2025-10-16 06:26:38,723 | INFO     | -- intersect: -5725662571.109078
[2025-10-16 02:27:45] 2025-10-16 06:26:38,723 | INFO     | intersect: -5725662571.109078
[2025-10-16 02:27:45] 2025-10-16 06:26:38,724 | INFO     | chi2: 0.0006144717931951258
[2025-10-16 02:27:45] 2025-10-16 06:26:38,724 | INFO     | -- intersect: -5725662571.109078
[2025-10-16 02:27:45] 2025-10-16 06:26:38,724 | INFO     | current memory leak: 3.25 B/s (using 163 data points, chi2=0.00)
[2025-10-16 02:27:45] 2025-10-16 06:26:38,725 | INFO     | could have reported an average CPU frequency of 2488 MHz (10 samples)
[2025-10-16 02:27:45] 2025-10-16 06:26:38,725 | INFO     | ..............................
[2025-10-16 02:27:45] 2025-10-16 06:26:38,725 | INFO     | . Timing measurements:
[2025-10-16 02:27:45] 2025-10-16 06:26:38,725 | INFO     | . get job = 0 s
[2025-10-16 02:27:45] 2025-10-16 06:26:38,726 | INFO     | . initial setup = 2 s
[2025-10-16 02:27:45] 2025-10-16 06:26:38,726 | INFO     | . payload setup = 4 s
[2025-10-16 02:27:45] 2025-10-16 06:26:38,726 | INFO     | . stage-in = 0 s
[2025-10-16 02:27:45] 2025-10-16 06:26:38,726 | INFO     | . payload execution = 11803 s
[2025-10-16 02:27:45] 2025-10-16 06:26:38,726 | INFO     | . stage-out = 2 s
[2025-10-16 02:27:45] 2025-10-16 06:26:38,726 | INFO     | . log creation = 0 s
[2025-10-16 02:27:45] 2025-10-16 06:26:38,726 | INFO     | ..............................
[2025-10-16 02:27:45] 2025-10-16 06:26:38,839 | INFO     | 
[2025-10-16 02:27:45] 2025-10-16 06:26:38,839 | INFO     | job summary report
[2025-10-16 02:27:45] 2025-10-16 06:26:38,839 | INFO     | --------------------------------------------------
[2025-10-16 02:27:45] 2025-10-16 06:26:38,839 | INFO     | PanDA job id: 6846701972
[2025-10-16 02:27:45] 2025-10-16 06:26:38,839 | INFO     | task id: 46776533
[2025-10-16 02:27:45] 2025-10-16 06:26:38,840 | INFO     | errors: (none)
[2025-10-16 02:27:45] 2025-10-16 06:26:38,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 02:27:45] 2025-10-16 06:26:38,840 | INFO     | pilot state: finished 
[2025-10-16 02:27:45] 2025-10-16 06:26:38,840 | INFO     | transexitcode: 0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,840 | INFO     | exeerrorcode: 0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,840 | INFO     | exeerrordiag: 
[2025-10-16 02:27:45] 2025-10-16 06:26:38,840 | INFO     | exitcode: 0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,840 | INFO     | exitmsg: OK
[2025-10-16 02:27:45] 2025-10-16 06:26:38,840 | INFO     | cpuconsumptiontime: 88648 s
[2025-10-16 02:27:45] 2025-10-16 06:26:38,840 | INFO     | nevents: 400
[2025-10-16 02:27:45] 2025-10-16 06:26:38,841 | INFO     | neventsw: 0
[2025-10-16 02:27:45] 2025-10-16 06:26:38,841 | INFO     | pid: 24992
[2025-10-16 02:27:45] 2025-10-16 06:26:38,841 | INFO     | pgrp: 24992
[2025-10-16 02:27:45] 2025-10-16 06:26:38,841 | INFO     | corecount: 8
[2025-10-16 02:27:45] 2025-10-16 06:26:38,841 | INFO     | event service: False
[2025-10-16 02:27:45] 2025-10-16 06:26:38,841 | INFO     | sizes: {0: 2348823, 4: 2349085, 11: 2349113, 11812: 2378636, 11816: 2387634, 11818: 2387690, 11824: 2388012}
[2025-10-16 02:27:45] 2025-10-16 06:26:38,841 | INFO     | --------------------------------------------------
[2025-10-16 02:27:45] 2025-10-16 06:26:38,841 | INFO     | 
[2025-10-16 02:27:45] 2025-10-16 06:26:38,841 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-16 02:27:45] 2025-10-16 06:26:38,854 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,855 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,855 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,855 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,855 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,855 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,855 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,855 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,855 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,855 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,856 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 02:27:45] 2025-10-16 06:26:38,856 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,856 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 02:27:45] 2025-10-16 06:26:38,857 | INFO     | job 6846701972 has completed (purged errors)
[2025-10-16 02:27:45] 2025-10-16 06:26:38,857 | INFO     | overall cleanup function is called
[2025-10-16 02:27:45] 2025-10-16 06:26:39,864 | INFO     | --- collectZombieJob: --- 10, [24992]
[2025-10-16 02:27:45] 2025-10-16 06:26:39,864 | INFO     | zombie collector waiting for pid 24992
[2025-10-16 02:27:45] 2025-10-16 06:26:39,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 02:27:45] 2025-10-16 06:26:39,865 | INFO     | collected zombie processes
[2025-10-16 02:27:45] 2025-10-16 06:26:39,865 | INFO     | will attempt to kill all subprocesses of pid=24992
[2025-10-16 02:27:45] 2025-10-16 06:26:40,029 | INFO     | process IDs to be killed: [24992] (in reverse order)
[2025-10-16 02:27:45] 2025-10-16 06:26:40,085 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 02:27:45] 2025-10-16 06:26:40,086 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 02:27:45] 2025-10-16 06:26:40,091 | INFO     | did not find any defunct processes belonging to 24992
[2025-10-16 02:27:45] 2025-10-16 06:26:40,095 | INFO     | did not find any defunct processes belonging to 24992
[2025-10-16 02:27:45] 2025-10-16 06:26:40,096 | INFO     | ready for new job
[2025-10-16 02:27:45] 2025-10-16 06:26:40,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 02:27:45] 2025-10-16 06:26:40,098 | INFO     | ***************************************
[2025-10-16 02:27:45] 2025-10-16 06:26:40,098 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 02:27:45] 2025-10-16 06:26:40,098 | INFO     | ***************************************
[2025-10-16 02:27:45] 2025-10-16 06:26:40,098 | INFO     | 
[2025-10-16 02:27:45] 2025-10-16 06:26:40,100 | INFO     | architecture information:
[2025-10-16 02:27:45] 2025-10-16 06:26:40,100 | INFO     | executing command: cat /etc/os-release
[2025-10-16 02:27:45] 2025-10-16 06:26:40,116 | INFO     | cat /etc/os-release:
[2025-10-16 02:27:45] NAME="CentOS Linux"
[2025-10-16 02:27:45] VERSION="7 (Core)"
[2025-10-16 02:27:45] ID="centos"
[2025-10-16 02:27:45] ID_LIKE="rhel fedora"
[2025-10-16 02:27:45] VERSION_ID="7"
[2025-10-16 02:27:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 02:27:45] ANSI_COLOR="0;31"
[2025-10-16 02:27:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 02:27:45] HOME_URL="https://www.centos.org/"
[2025-10-16 02:27:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 02:27:45] 
[2025-10-16 02:27:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 02:27:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 02:27:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 02:27:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 02:27:45] 
[2025-10-16 02:27:45] 2025-10-16 06:26:40,116 | INFO     | ***************************************
[2025-10-16 02:27:45] 2025-10-16 06:26:40,619 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-16 02:27:45] 2025-10-16 06:26:40,636 | INFO     | sufficient remaining disk space (28100788224 B)
[2025-10-16 02:27:45] 2025-10-16 06:26:40,636 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 02:27:45] 2025-10-16 06:26:40,637 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 02:27:45] 2025-10-16 06:26:40,637 | INFO     | update_server=False
[2025-10-16 02:27:45] 2025-10-16 06:26:40,637 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 02:27:45] 2025-10-16 06:26:40,637 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 02:27:45] 2025-10-16 06:26:40,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 02:27:45] 2025-10-16 06:26:40,694 | INFO     | aborting loop
[2025-10-16 02:27:45] 2025-10-16 06:26:41,098 | INFO     | all data control threads have been joined
[2025-10-16 02:27:45] 2025-10-16 06:26:41,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 02:27:45] 2025-10-16 06:26:41,643 | INFO     | [job] retrieve thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:41,643 | INFO     | [job] queue monitor thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:41,699 | INFO     | [job] job monitor thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:41,720 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:41,834 | INFO     | all job control threads have been joined
[2025-10-16 02:27:45] 2025-10-16 06:26:41,837 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:41,899 | INFO     | [data] copytool_in thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:41,921 | INFO     | all payload control threads have been joined
[2025-10-16 02:27:45] 2025-10-16 06:26:42,103 | INFO     | [data] control thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:42,176 | INFO     | [job] validate thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:42,198 | INFO     | [payload] failed_post thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:42,318 | INFO     | [payload] validate_post thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:42,739 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:42,777 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:42,839 | INFO     | [job] control thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:42,922 | INFO     | [payload] control thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:43,384 | INFO     | [data] copytool_out thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:26:43,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 02:27:45] 2025-10-16 06:26:47,762 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 02:27:45] 2025-10-16 06:27:10,950 | INFO     | PID=17268 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-16 02:27:45] 2025-10-16 06:27:10,951 | INFO     | .. there are 3 such processes running
[2025-10-16 02:27:45] 2025-10-16 06:27:10,951 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 02:27:45] 2025-10-16 06:27:10,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 02:27:45] 2025-10-16 06:27:10,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 02:27:45] 2025-10-16 06:27:39,445 | INFO     | [monitor] cgroup control has ended
[2025-10-16 02:27:45] 2025-10-16 06:27:40,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381463349056)>', '<ExcThread(monitor, started 140380729239296)>']
[2025-10-16 02:27:45] 2025-10-16 06:27:41,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 02:27:45] 2025-10-16 06:27:41,107 | INFO     | [monitor] control thread has ended
[2025-10-16 02:27:45] 2025-10-16 06:27:45,339 | INFO     | all workflow threads have been joined
[2025-10-16 02:27:45] 2025-10-16 06:27:45,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 02:27:45] 2025-10-16 06:27:45,339 | INFO     | traces error code: 0
[2025-10-16 02:27:45] 2025-10-16 06:27:45,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 02:27:45] 2025-10-16 06:27:45,470 [wrapper] ==== pilot stdout END ====
[2025-10-16 02:27:45] 2025-10-16 06:27:45,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 02:27:45] 2025-10-16 06:27:45,475 [wrapper] pilotpid: 17268
[2025-10-16 02:27:45] 2025-10-16 06:27:45,478 [wrapper] Pilot exit status: 0
[2025-10-16 02:27:45] 2025-10-16 06:27:45,488 [wrapper] pandaids: 6846701972
[2025-10-16 02:27:45] 2025-10-16 06:27:45,529 [wrapper] cleanup supervisor_pilot  5343 17269
[2025-10-16 02:27:45] 2025-10-16 06:27:45,531 [wrapper] Test setup, not cleaning
[2025-10-16 02:27:45] 2025-10-16 06:27:45,534 [wrapper] apfmon messages muted
[2025-10-16 02:27:45] 2025-10-16 06:27:45,536 [wrapper] ==== wrapper stdout END ====
[2025-10-16 02:27:45] 2025-10-16 06:27:45,539 [wrapper] ==== wrapper stderr END ====
[2025-10-16 02:27:45]  *** Error codes and diagnostics ***
[2025-10-16 02:27:45]     "exeErrorCode": 0,
[2025-10-16 02:27:45]     "exeErrorDiag": "",
[2025-10-16 02:27:45]     "pilotErrorCode": 0,
[2025-10-16 02:27:45]     "pilotErrorDiag": "",
[2025-10-16 02:27:45]  *** Listing of results directory ***
[2025-10-16 02:27:45] total 434884
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas    557409 Oct 15 18:36 pilot3.tar.gz
[2025-10-16 02:27:45] -rwx------ 1 boincer umatlas     36292 Oct 15 18:50 runpilot2-wrapper.sh
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas      5112 Oct 15 18:50 queuedata.json
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas       100 Oct 15 23:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 02:27:45] -rwxr-xr-x 1 boincer umatlas      7986 Oct 15 23:09 run_atlas
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas       105 Oct 15 23:09 job.xml
[2025-10-16 02:27:45] -rw-r--r-- 2 boincer umatlas 230368350 Oct 15 23:09 EVNT.46776529._000197.pool.root.1
[2025-10-16 02:27:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 15 23:09 start_atlas.sh
[2025-10-16 02:27:45] drwxrwx--x 2 boincer umatlas      4096 Oct 15 23:09 shared
[2025-10-16 02:27:45] -rw-r--r-- 2 boincer umatlas    569682 Oct 15 23:09 input.tar.gz
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas         0 Oct 15 23:09 boinc_lockfile
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas      2555 Oct 15 23:09 pandaJob.out
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas    974318 Oct 15 23:09 agis_schedconf.cvmfs.json
[2025-10-16 02:27:45] drwx------ 5 boincer umatlas      4096 Oct 15 23:09 pilot3
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas      5951 Oct 16 02:18 init_data.xml
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas 206872042 Oct 16 02:25 HITS.46776533._006900.pool.root.1
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas       531 Oct 16 02:26 boinc_task_state.xml
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas      1054 Oct 16 02:26 memory_monitor_summary.json
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas   1560740 Oct 16 02:26 agis_ddmendpoints.agis.ALL.json
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas    431260 Oct 16 02:26 log.46776533._006900.job.log.tgz.1
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas        95 Oct 16 02:26 pilot_heartbeat.json
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas      7854 Oct 16 02:26 heartbeat.json
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas      8192 Oct 16 02:27 boinc_mmap_file
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas        28 Oct 16 02:27 wrapper_checkpoint.txt
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas      4821 Oct 16 02:27 pilotlog.txt
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas   1661197 Oct 16 02:27 log.46776533._006900.job.log.1
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas       357 Oct 16 02:27 output.list
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas       620 Oct 16 02:27 runtime_log
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas   2109440 Oct 16 02:27 result.tar.gz
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas       662 Oct 16 02:27 WD4MDm7UPT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYZWMDmUESBSo.diag
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas      8704 Oct 16 02:27 runtime_log.err
[2025-10-16 02:27:45] -rw-r--r-- 1 boincer umatlas     20857 Oct 16 02:27 stderr.txt
[2025-10-16 02:27:45] HITS file was successfully produced:
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas 206872042 Oct 16 02:25 shared/HITS.pool.root.1
[2025-10-16 02:27:45]  *** Contents of shared directory: ***
[2025-10-16 02:27:45] total 429636
[2025-10-16 02:27:45] -rw-r--r-- 2 boincer umatlas 230368350 Oct 15 23:09 ATLAS.root_0
[2025-10-16 02:27:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 15 23:09 start_atlas.sh
[2025-10-16 02:27:45] -rw-r--r-- 2 boincer umatlas    569682 Oct 15 23:09 input.tar.gz
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas 206872042 Oct 16 02:25 HITS.pool.root.1
[2025-10-16 02:27:45] -rw------- 1 boincer umatlas   2109440 Oct 16 02:27 result.tar.gz
02:27:46 (13237): run_atlas exited; CPU time 88818.634231
02:27:46 (13237): called boinc_finish(0)

</stderr_txt>
]]>

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