Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:21:50 (3784963): wrapper (7.7.26015): starting
12:21:50 (3784963): wrapper: running run_atlas (--nthreads 3)
[2025-10-16 12:21:50] Arguments: --nthreads 3
[2025-10-16 12:21:50] Threads: 3
[2025-10-16 12:21:50] Checking for CVMFS
[2025-10-16 12:21:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 12:21:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 12:21:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 12:21:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 12:21:50] 2.9.2.0 3608131 637 68016 151772 0 56 4663803 36864000 0 130560 0 465670 99.986 30655 1691 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-16 12:21:50] CVMFS is ok
[2025-10-16 12:21:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 12:21:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 12:21:50] Further information can be found at the LHC@home message board.
[2025-10-16 12:21:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 12:21:50] Checking for apptainer binary...
[2025-10-16 12:21:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 12:21:50] Running /usr/bin/apptainer --version
[2025-10-16 12:21:51] apptainer version 1.4.1-1.1
[2025-10-16 12:21:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 12:21:51] cosA121b
[2025-10-16 12:21:51] apptainer works
[2025-10-16 12:21:51] Set ATHENA_PROC_NUMBER=3
[2025-10-16 12:21:51] Set ATHENA_CORE_NUMBER=3
[2025-10-16 12:21:51] Starting ATLAS job with PandaID=6846771816
[2025-10-16 12:21:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 13:55:09]  *** The last 200 lines of the pilot log: ***
[2025-10-16 13:55:09]  protocol_id=None
[2025-10-16 13:55:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-16 13:55:09]  replicas=None
[2025-10-16 13:55:09]  scope=mc23_13p6TeV
[2025-10-16 13:55:09]  status=None
[2025-10-16 13:55:09]  status_code=0
[2025-10-16 13:55:09]  storage_token=
[2025-10-16 13:55:09]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6846771816/log.46771637._002467.job.log.tgz.1
[2025-10-16 13:55:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/3e/log.46771637._002467.job.log.tgz.1
[2025-10-16 13:55:09]  workdir=None
[2025-10-16 13:55:09] ]
[2025-10-16 13:55:09] 2025-10-16 11:54:18,861 | INFO     | transferring file log.46771637._002467.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6846771816/log.46771637._002467.job.log.tgz.1 to /local/data/boinc/
[2025-10-16 13:55:09] 2025-10-16 11:54:18,861 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6846771816/log.46771637._002467.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._0024
[2025-10-16 13:55:09] 2025-10-16 11:54:18,873 | INFO     | adding to output.list: log.46771637._002467.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/3e/log.46771637._002467.job.log.tg
[2025-10-16 13:55:09] 2025-10-16 11:54:18,873 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-16 13:55:09] 2025-10-16 11:54:18,873 | INFO     | summary of transferred files:
[2025-10-16 13:55:09] 2025-10-16 11:54:18,873 | INFO     |  -- lfn=log.46771637._002467.job.log.tgz.1, status_code=0, status=transferred
[2025-10-16 13:55:09] 2025-10-16 11:54:18,873 | INFO     | stage-out finished correctly
[2025-10-16 13:55:09] 2025-10-16 11:54:19,588 | INFO     | time since job start (5543s) is within the limit (172800.0s)
[2025-10-16 13:55:09] 2025-10-16 11:54:21,594 | INFO     | time since job start (5545s) is within the limit (172800.0s)
[2025-10-16 13:55:09] 2025-10-16 11:54:21,857 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-16 13:55:09] 2025-10-16 11:54:21,889 | INFO     | job 6846771816 has state=finished
[2025-10-16 13:55:09] 2025-10-16 11:54:21,889 | INFO     | preparing for final server update for job 6846771816 in state='finished'
[2025-10-16 13:55:09] 2025-10-16 11:54:21,889 | INFO     | this job has now completed (state=finished)
[2025-10-16 13:55:09] 2025-10-16 11:54:21,889 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-16 13:55:09] 2025-10-16 11:54:21,889 | INFO     | log transfer has been attempted: DONE
[2025-10-16 13:55:09] 2025-10-16 11:54:21,889 | INFO     | job 6846771816 has finished - writing final server update
[2025-10-16 13:55:09] 2025-10-16 11:54:21,889 | INFO     | total number of processed events: 400 (read)
[2025-10-16 13:55:09] 2025-10-16 11:54:21,890 | INFO     | executing command: lscpu
[2025-10-16 13:55:09] 2025-10-16 11:54:21,903 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-16 13:55:09] 2025-10-16 11:54:22,413 | WARNING  | process 3795119 can no longer be monitored (due to stat problems) - aborting
[2025-10-16 13:55:09] 2025-10-16 11:54:22,413 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6846771816/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 13:55:09] 2025-10-16 11:54:22,483 | INFO     | number of running child processes to parent process 3795119: 1
[2025-10-16 13:55:09] 2025-10-16 11:54:22,483 | INFO     | maximum number of monitored processes: 6
[2025-10-16 13:55:09] 2025-10-16 11:54:23,599 | INFO     | time since job start (5547s) is within the limit (172800.0s)
[2025-10-16 13:55:09] 2025-10-16 11:54:24,185 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-16 13:55:09] 2025-10-16 11:54:24,186 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3644.782083333333
[2025-10-16 13:55:09] 2025-10-16 11:54:24,187 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6846771816/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 13:55:09] 2025-10-16 11:54:24,187 | INFO     | extracted standard info from prmon json
[2025-10-16 13:55:09] 2025-10-16 11:54:24,187 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 13:55:09] 2025-10-16 11:54:24,187 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 13:55:09] 2025-10-16 11:54:24,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 13:55:09] 2025-10-16 11:54:24,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 13:55:09] 2025-10-16 11:54:24,188 | INFO     | fitting pss+swap vs Time
[2025-10-16 13:55:09] 2025-10-16 11:54:24,188 | INFO     | sum of square deviations: 183761585.0
[2025-10-16 13:55:09] 2025-10-16 11:54:24,188 | INFO     | sum of deviations: -12883758150.0
[2025-10-16 13:55:09] 2025-10-16 11:54:24,188 | INFO     | mean x: 1760612972.5
[2025-10-16 13:55:09] 2025-10-16 11:54:24,188 | INFO     | mean y: 2470146.285714286
[2025-10-16 13:55:09] 2025-10-16 11:54:24,188 | INFO     | -- intersect: 123441282090.80939
[2025-10-16 13:55:09] 2025-10-16 11:54:24,188 | INFO     | intersect: 123441282090.80939
[2025-10-16 13:55:09] 2025-10-16 11:54:24,188 | INFO     | chi2: 0.05733921685086379
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | -- intersect: 123441282090.80939
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | current memory leak: -70.11 B/s (using 84 data points, chi2=0.06)
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | could have reported an average CPU frequency of 3868 MHz (7 samples)
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | ..............................
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | . Timing measurements:
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | . get job = 0 s
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | . initial setup = 1 s
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | . payload setup = 2 s
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | . stage-in = 0 s
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | . payload execution = 5521 s
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | . stage-out = 0 s
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | . log creation = 0 s
[2025-10-16 13:55:09] 2025-10-16 11:54:24,189 | INFO     | ..............................
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | 
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | job summary report
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | --------------------------------------------------
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | PanDA job id: 6846771816
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | task id: 46771637
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | errors: (none)
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | pilot state: finished 
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | transexitcode: 0
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | exeerrorcode: 0
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | exeerrordiag: 
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | exitcode: 0
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | exitmsg: OK
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | cpuconsumptiontime: 15826 s
[2025-10-16 13:55:09] 2025-10-16 11:54:24,219 | INFO     | nevents: 400
[2025-10-16 13:55:09] 2025-10-16 11:54:24,220 | INFO     | neventsw: 0
[2025-10-16 13:55:09] 2025-10-16 11:54:24,220 | INFO     | pid: 3795119
[2025-10-16 13:55:09] 2025-10-16 11:54:24,220 | INFO     | pgrp: 3795119
[2025-10-16 13:55:09] 2025-10-16 11:54:24,220 | INFO     | corecount: 3
[2025-10-16 13:55:09] 2025-10-16 11:54:24,220 | INFO     | event service: False
[2025-10-16 13:55:09] 2025-10-16 11:54:24,220 | INFO     | sizes: {0: 2348922, 2: 2349184, 10: 2349212, 5527: 2375994, 5529: 2384998, 5532: 2385054, 5534: 2385376}
[2025-10-16 13:55:09] 2025-10-16 11:54:24,220 | INFO     | --------------------------------------------------
[2025-10-16 13:55:09] 2025-10-16 11:54:24,220 | INFO     | 
[2025-10-16 13:55:09] 2025-10-16 11:54:24,220 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-16 13:55:09] 2025-10-16 11:54:24,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | job 6846771816 has completed (purged errors)
[2025-10-16 13:55:09] 2025-10-16 11:54:24,232 | INFO     | overall cleanup function is called
[2025-10-16 13:55:09] 2025-10-16 11:54:25,239 | INFO     | --- collectZombieJob: --- 10, [3795119]
[2025-10-16 13:55:09] 2025-10-16 11:54:25,239 | INFO     | zombie collector waiting for pid 3795119
[2025-10-16 13:55:09] 2025-10-16 11:54:25,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 13:55:09] 2025-10-16 11:54:25,239 | INFO     | collected zombie processes
[2025-10-16 13:55:09] 2025-10-16 11:54:25,239 | INFO     | will attempt to kill all subprocesses of pid=3795119
[2025-10-16 13:55:09] 2025-10-16 11:54:25,290 | INFO     | process IDs to be killed: [3795119] (in reverse order)
[2025-10-16 13:55:09] 2025-10-16 11:54:25,317 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 13:55:09] 2025-10-16 11:54:25,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 13:55:09] 2025-10-16 11:54:25,319 | INFO     | did not find any defunct processes belonging to 3795119
[2025-10-16 13:55:09] 2025-10-16 11:54:25,320 | INFO     | did not find any defunct processes belonging to 3795119
[2025-10-16 13:55:09] 2025-10-16 11:54:25,320 | INFO     | ready for new job
[2025-10-16 13:55:09] 2025-10-16 11:54:25,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 13:55:09] 2025-10-16 11:54:25,321 | INFO     | ***************************************
[2025-10-16 13:55:09] 2025-10-16 11:54:25,321 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 13:55:09] 2025-10-16 11:54:25,321 | INFO     | ***************************************
[2025-10-16 13:55:09] 2025-10-16 11:54:25,321 | INFO     | 
[2025-10-16 13:55:09] 2025-10-16 11:54:25,322 | INFO     | architecture information:
[2025-10-16 13:55:09] 2025-10-16 11:54:25,322 | INFO     | executing command: cat /etc/os-release
[2025-10-16 13:55:09] 2025-10-16 11:54:25,331 | INFO     | cat /etc/os-release:
[2025-10-16 13:55:09] NAME="CentOS Linux"
[2025-10-16 13:55:09] VERSION="7 (Core)"
[2025-10-16 13:55:09] ID="centos"
[2025-10-16 13:55:09] ID_LIKE="rhel fedora"
[2025-10-16 13:55:09] VERSION_ID="7"
[2025-10-16 13:55:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 13:55:09] ANSI_COLOR="0;31"
[2025-10-16 13:55:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 13:55:09] HOME_URL="https://www.centos.org/"
[2025-10-16 13:55:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 13:55:09] 
[2025-10-16 13:55:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 13:55:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 13:55:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 13:55:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 13:55:09] 
[2025-10-16 13:55:09] 2025-10-16 11:54:25,331 | INFO     | ***************************************
[2025-10-16 13:55:09] 2025-10-16 11:54:25,834 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-16 13:55:09] 2025-10-16 11:54:25,844 | INFO     | sufficient remaining disk space (355222945792 B)
[2025-10-16 13:55:09] 2025-10-16 11:54:25,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 13:55:09] 2025-10-16 11:54:25,844 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 13:55:09] 2025-10-16 11:54:25,844 | INFO     | update_server=False
[2025-10-16 13:55:09] 2025-10-16 11:54:25,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 13:55:09] 2025-10-16 11:54:25,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 13:55:09] 2025-10-16 11:54:25,960 | INFO     | all job control threads have been joined
[2025-10-16 13:55:09] 2025-10-16 11:54:25,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 13:55:09] 2025-10-16 11:54:25,991 | INFO     | aborting loop
[2025-10-16 13:55:09] 2025-10-16 11:54:26,311 | INFO     | all data control threads have been joined
[2025-10-16 13:55:09] 2025-10-16 11:54:26,850 | INFO     | [job] retrieve thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:26,850 | INFO     | [job] queue monitor thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:26,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 13:55:09] 2025-10-16 11:54:26,966 | INFO     | [job] control thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:26,996 | INFO     | [job] job monitor thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:27,077 | INFO     | all payload control threads have been joined
[2025-10-16 13:55:09] 2025-10-16 11:54:27,316 | INFO     | [data] control thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:27,637 | INFO     | [data] copytool_in thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:27,701 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:27,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 13:55:09] 2025-10-16 11:54:28,083 | INFO     | [payload] control thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:28,091 | INFO     | [job] validate thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:28,132 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:28,257 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:28,327 | INFO     | [payload] validate_post thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:28,439 | INFO     | [payload] failed_post thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:28,917 | INFO     | [data] copytool_out thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:31,897 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:36,218 | INFO     | job.realtimelogging is not enabled
[2025-10-16 13:55:09] 2025-10-16 11:54:37,224 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 13:55:09] 2025-10-16 11:54:55,696 | INFO     | 5549s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-16 13:55:09] 2025-10-16 11:54:56,768 | INFO     | PID=3788682 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-16 13:55:09] 2025-10-16 11:54:56,768 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 13:55:09] 2025-10-16 11:54:56,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 13:55:09] 2025-10-16 11:54:56,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 13:55:09] 2025-10-16 11:55:02,727 | INFO     | [monitor] cgroup control has ended
[2025-10-16 13:55:09] 2025-10-16 11:55:04,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814609934144)>', '<ExcThread(monitor, started 139814112315136)>']
[2025-10-16 13:55:09] 2025-10-16 11:55:04,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 13:55:09] 2025-10-16 11:55:04,807 | INFO     | [monitor] control thread has ended
[2025-10-16 13:55:09] 2025-10-16 11:55:09,649 | INFO     | all workflow threads have been joined
[2025-10-16 13:55:09] 2025-10-16 11:55:09,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 13:55:09] 2025-10-16 11:55:09,649 | INFO     | traces error code: 0
[2025-10-16 13:55:09] 2025-10-16 11:55:09,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 13:55:09] 2025-10-16 11:55:09,698 [wrapper] ==== pilot stdout END ====
[2025-10-16 13:55:09] 2025-10-16 11:55:09,700 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 13:55:09] 2025-10-16 11:55:09,703 [wrapper] pilotpid: 3788682
[2025-10-16 13:55:09] 2025-10-16 11:55:09,705 [wrapper] Pilot exit status: 0
[2025-10-16 13:55:09] 2025-10-16 11:55:09,713 [wrapper] pandaids: 6846771816
[2025-10-16 13:55:09] 2025-10-16 11:55:09,732 [wrapper] cleanup supervisor_pilot 3808389 3788683
[2025-10-16 13:55:09] 2025-10-16 11:55:09,734 [wrapper] Test setup, not cleaning
[2025-10-16 13:55:09] 2025-10-16 11:55:09,737 [wrapper] apfmon messages muted
[2025-10-16 13:55:09] 2025-10-16 11:55:09,739 [wrapper] ==== wrapper stdout END ====
[2025-10-16 13:55:09] 2025-10-16 11:55:09,741 [wrapper] ==== wrapper stderr END ====
[2025-10-16 13:55:09]  *** Error codes and diagnostics ***
[2025-10-16 13:55:09]     "exeErrorCode": 0,
[2025-10-16 13:55:09]     "exeErrorDiag": "",
[2025-10-16 13:55:09]     "pilotErrorCode": 0,
[2025-10-16 13:55:09]     "pilotErrorDiag": "",
[2025-10-16 13:55:09]  *** Listing of results directory ***
[2025-10-16 13:55:09] total 437568
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc    557409 Oct 16 01:33 pilot3.tar.gz
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc      5112 Oct 16 01:54 queuedata.json
[2025-10-16 13:55:09] -rwx------ 1 boinc boinc     36292 Oct 16 01:55 runpilot2-wrapper.sh
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc       100 Oct 16 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 13:55:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 12:21 run_atlas
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc       105 Oct 16 12:21 job.xml
[2025-10-16 13:55:09] -rw-r--r-- 2 boinc boinc 228438647 Oct 16 12:21 EVNT.46771634._000200.pool.root.1
[2025-10-16 13:55:09] drwxrwx--x 2 boinc boinc      4096 Oct 16 12:21 shared
[2025-10-16 13:55:09] -rw-r--r-- 2 boinc boinc    569672 Oct 16 12:21 input.tar.gz
[2025-10-16 13:55:09] -rw-r--r-- 2 boinc boinc     15120 Oct 16 12:21 start_atlas.sh
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc         0 Oct 16 12:21 boinc_setup_complete
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc      6440 Oct 16 12:21 init_data.xml
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc         0 Oct 16 12:21 boinc_lockfile
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc      2552 Oct 16 12:21 pandaJob.out
[2025-10-16 13:55:09] -rw------- 1 boinc boinc    976065 Oct 16 12:21 agis_schedconf.cvmfs.json
[2025-10-16 13:55:09] -rw------- 1 boinc boinc   1560740 Oct 16 12:21 agis_ddmendpoints.agis.ALL.json
[2025-10-16 13:55:09] drwx------ 5 boinc boinc      4096 Oct 16 12:21 pilot3
[2025-10-16 13:55:09] -rw------- 1 boinc boinc 213568094 Oct 16 13:53 HITS.46771637._002467.pool.root.1
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc       529 Oct 16 13:54 boinc_task_state.xml
[2025-10-16 13:55:09] -rw------- 1 boinc boinc      1036 Oct 16 13:54 memory_monitor_summary.json
[2025-10-16 13:55:09] -rw------- 1 boinc boinc    268292 Oct 16 13:54 log.46771637._002467.job.log.tgz.1
[2025-10-16 13:55:09] -rw------- 1 boinc boinc      7765 Oct 16 13:54 heartbeat.json
[2025-10-16 13:55:09] -rw------- 1 boinc boinc        95 Oct 16 13:54 pilot_heartbeat.json
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc      8192 Oct 16 13:54 boinc_mmap_file
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc        27 Oct 16 13:54 wrapper_checkpoint.txt
[2025-10-16 13:55:09] -rw------- 1 boinc boinc      4939 Oct 16 13:55 pilotlog.txt
[2025-10-16 13:55:09] -rw------- 1 boinc boinc    809894 Oct 16 13:55 log.46771637._002467.job.log.1
[2025-10-16 13:55:09] -rw------- 1 boinc boinc       357 Oct 16 13:55 output.list
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc       620 Oct 16 13:55 runtime_log
[2025-10-16 13:55:09] -rw------- 1 boinc boinc   1095680 Oct 16 13:55 result.tar.gz
[2025-10-16 13:55:09] -rw------- 1 boinc boinc       661 Oct 16 13:55 sZINDmGWQT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4LoNDmMWYwyn.diag
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc      8787 Oct 16 13:55 runtime_log.err
[2025-10-16 13:55:09] -rw-r--r-- 1 boinc boinc     21784 Oct 16 13:55 stderr.txt
[2025-10-16 13:55:09] HITS file was successfully produced:
[2025-10-16 13:55:09] -rw------- 1 boinc boinc 213568094 Oct 16 13:53 shared/HITS.pool.root.1
[2025-10-16 13:55:09]  *** Contents of shared directory: ***
[2025-10-16 13:55:09] total 433308
[2025-10-16 13:55:09] -rw-r--r-- 2 boinc boinc 228438647 Oct 16 12:21 ATLAS.root_0
[2025-10-16 13:55:09] -rw-r--r-- 2 boinc boinc    569672 Oct 16 12:21 input.tar.gz
[2025-10-16 13:55:09] -rw-r--r-- 2 boinc boinc     15120 Oct 16 12:21 start_atlas.sh
[2025-10-16 13:55:09] -rw------- 1 boinc boinc 213568094 Oct 16 13:53 HITS.pool.root.1
[2025-10-16 13:55:09] -rw------- 1 boinc boinc   1095680 Oct 16 13:55 result.tar.gz
13:55:11 (3784963): run_atlas exited; CPU time 15850.338854
13:55:11 (3784963): called boinc_finish(0)

</stderr_txt>
]]>

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