Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:51:45 (12030): wrapper (7.7.26015): starting
11:51:45 (12030): wrapper: running run_atlas (--nthreads 8)
[2025-10-16 11:51:45] Arguments: --nthreads 8
[2025-10-16 11:51:45] Threads: 8
[2025-10-16 11:51:45] Checking for CVMFS
[2025-10-16 11:51:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 11:51:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 11:51:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 11:51:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 11:51:48] 2.11.2.0 25755 226193 141432 151770 1 60 24578900 25165825 4632 130560 0 129500490 99.881 69621874 3533 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-16 11:51:48] CVMFS is ok
[2025-10-16 11:51:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 11:51:48] Checking for apptainer binary...
[2025-10-16 11:51:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 11:51:48] Running /usr/bin/apptainer --version
[2025-10-16 11:51:48] apptainer version 1.3.2-1.el7
[2025-10-16 11:51:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 11:52:04] cg-vwn458.simple-grid.lan
[2025-10-16 11:52:04] apptainer works
[2025-10-16 11:52:04] Set ATHENA_PROC_NUMBER=8
[2025-10-16 11:52:04] Set ATHENA_CORE_NUMBER=8
[2025-10-16 11:52:04] Starting ATLAS job with PandaID=6846777154
[2025-10-16 11:52:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 15:49:14]  *** The last 200 lines of the pilot log: ***
[2025-10-16 15:49:14] 2025-10-16 13:48:34,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,515 | INFO     | time since job start (13975s) is within the limit (172800.0s)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,718 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-16 15:49:14] 2025-10-16 13:48:35,719 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,721 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6846777154/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,721 | INFO     | extracted standard info from prmon json
[2025-10-16 15:49:14] 2025-10-16 13:48:35,722 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 15:49:14] 2025-10-16 13:48:35,722 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 15:49:14] 2025-10-16 13:48:35,722 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 15:49:14] 2025-10-16 13:48:35,722 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 15:49:14] 2025-10-16 13:48:35,726 | INFO     | fitting pss+swap vs Time
[2025-10-16 15:49:14] 2025-10-16 13:48:35,727 | INFO     | sum of square deviations: 3301699115.0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,729 | INFO     | sum of deviations: 73886816506.99997
[2025-10-16 15:49:14] 2025-10-16 13:48:35,729 | INFO     | mean x: 1760615709.5
[2025-10-16 15:49:14] 2025-10-16 13:48:35,729 | INFO     | mean y: 2427776.845454545
[2025-10-16 15:49:14] 2025-10-16 13:48:35,729 | INFO     | -- intersect: -39397373760.54208
[2025-10-16 15:49:14] 2025-10-16 13:48:35,729 | INFO     | intersect: -39397373760.54208
[2025-10-16 15:49:14] 2025-10-16 13:48:35,730 | INFO     | chi2: 4.61536620033994
[2025-10-16 15:49:14] 2025-10-16 13:48:35,730 | INFO     | sum of square deviations: 3081657780.0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,731 | INFO     | sum of deviations: 86529504487.00002
[2025-10-16 15:49:14] 2025-10-16 13:48:35,732 | INFO     | mean x: 1760615557.0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,732 | INFO     | mean y: 2436353.3674418605
[2025-10-16 15:49:14] 2025-10-16 13:48:35,732 | INFO     | -- intersect: -49433679729.35786
[2025-10-16 15:49:14] 2025-10-16 13:48:35,732 | INFO     | intersect: -49433679729.35786
[2025-10-16 15:49:14] 2025-10-16 13:48:35,732 | INFO     | chi2: 3.8662872189182766
[2025-10-16 15:49:14] 2025-10-16 13:48:35,732 | INFO     | current chi2=3.8662872189182766 (change=16.230109354410292 %)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,732 | INFO     | right removable region: 214
[2025-10-16 15:49:14] 2025-10-16 13:48:35,733 | INFO     | sum of square deviations: 3081657780.0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,734 | INFO     | sum of deviations: 7520785587.000004
[2025-10-16 15:49:14] 2025-10-16 13:48:35,734 | INFO     | mean x: 1760615862.0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,734 | INFO     | mean y: 2473663.2558139535
[2025-10-16 15:49:14] 2025-10-16 13:48:35,735 | INFO     | -- intersect: -4294309219.35654
[2025-10-16 15:49:14] 2025-10-16 13:48:35,735 | INFO     | intersect: -4294309219.35654
[2025-10-16 15:49:14] 2025-10-16 13:48:35,735 | INFO     | chi2: 1.0039047367034653
[2025-10-16 15:49:14] 2025-10-16 13:48:35,735 | INFO     | current chi2=1.0039047367034653 (change=78.24864391844956 %)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,735 | INFO     | sum of square deviations: 2871616632.5
[2025-10-16 15:49:14] 2025-10-16 13:48:35,737 | INFO     | sum of deviations: -7173535767.0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,737 | INFO     | mean x: 1760616014.5
[2025-10-16 15:49:14] 2025-10-16 13:48:35,737 | INFO     | mean y: 2484256.380952381
[2025-10-16 15:49:14] 2025-10-16 13:48:35,737 | INFO     | -- intersect: 4400648624.503215
[2025-10-16 15:49:14] 2025-10-16 13:48:35,737 | INFO     | intersect: 4400648624.503215
[2025-10-16 15:49:14] 2025-10-16 13:48:35,738 | INFO     | chi2: 0.7987561532195822
[2025-10-16 15:49:14] 2025-10-16 13:48:35,738 | INFO     | current chi2=0.7987561532195822 (change=20.435064800822847 %)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,738 | INFO     | left removable region: 20
[2025-10-16 15:49:14] 2025-10-16 13:48:35,738 | INFO     | sum of square deviations: 2263977332.5
[2025-10-16 15:49:14] 2025-10-16 13:48:35,739 | INFO     | sum of deviations: 3131180538.5
[2025-10-16 15:49:14] 2025-10-16 13:48:35,740 | INFO     | mean x: 1760616136.5
[2025-10-16 15:49:14] 2025-10-16 13:48:35,740 | INFO     | mean y: 2497497.644329897
[2025-10-16 15:49:14] 2025-10-16 13:48:35,740 | INFO     | -- intersect: -2432512298.2754617
[2025-10-16 15:49:14] 2025-10-16 13:48:35,740 | INFO     | intersect: -2432512298.2754617
[2025-10-16 15:49:14] 2025-10-16 13:48:35,741 | INFO     | chi2: 0.0007497300206632142
[2025-10-16 15:49:14] 2025-10-16 13:48:35,741 | INFO     | -- intersect: -2432512298.2754617
[2025-10-16 15:49:14] 2025-10-16 13:48:35,741 | INFO     | current memory leak: 1.38 B/s (using 194 data points, chi2=0.00)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | ..............................
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | . Timing measurements:
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | . get job = 0 s
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | . initial setup = 3 s
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | . payload setup = 135 s
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | . stage-in = 0 s
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | . payload execution = 13558 s
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | . stage-out = 5 s
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | . log creation = 1 s
[2025-10-16 15:49:14] 2025-10-16 13:48:35,742 | INFO     | ..............................
[2025-10-16 15:49:14] 2025-10-16 13:48:35,890 | INFO     | 
[2025-10-16 15:49:14] 2025-10-16 13:48:35,890 | INFO     | job summary report
[2025-10-16 15:49:14] 2025-10-16 13:48:35,890 | INFO     | --------------------------------------------------
[2025-10-16 15:49:14] 2025-10-16 13:48:35,890 | INFO     | PanDA job id: 6846777154
[2025-10-16 15:49:14] 2025-10-16 13:48:35,890 | INFO     | task id: 46771637
[2025-10-16 15:49:14] 2025-10-16 13:48:35,890 | INFO     | errors: (none)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,890 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 15:49:14] 2025-10-16 13:48:35,890 | INFO     | pilot state: finished 
[2025-10-16 15:49:14] 2025-10-16 13:48:35,890 | INFO     | transexitcode: 0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | exeerrorcode: 0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | exeerrordiag: 
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | exitcode: 0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | exitmsg: OK
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | cpuconsumptiontime: 51224 s
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | nevents: 400
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | neventsw: 0
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | pid: 22403
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | pgrp: 22403
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | corecount: 8
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | event service: False
[2025-10-16 15:49:14] 2025-10-16 13:48:35,891 | INFO     | sizes: {0: 2348693, 1: 2348948, 2: 2348948, 12: 2348976, 23: 2349004, 34: 2349032, 44: 2349188, 55: 2349216, 66: 2349244, 77: 2349272, 87: 2349328, 90: 2349898, 98
[2025-10-16 15:49:14] 2025-10-16 13:48:35,892 | INFO     | --------------------------------------------------
[2025-10-16 15:49:14] 2025-10-16 13:48:35,892 | INFO     | 
[2025-10-16 15:49:14] 2025-10-16 13:48:35,892 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-10-16 15:49:14] 2025-10-16 13:48:35,984 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,984 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,984 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,984 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,984 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 15:49:14] 2025-10-16 13:48:35,986 | INFO     | job 6846777154 has completed (purged errors)
[2025-10-16 15:49:14] 2025-10-16 13:48:35,986 | INFO     | overall cleanup function is called
[2025-10-16 15:49:14] 2025-10-16 13:48:36,994 | INFO     | --- collectZombieJob: --- 10, [22403]
[2025-10-16 15:49:14] 2025-10-16 13:48:36,994 | INFO     | zombie collector waiting for pid 22403
[2025-10-16 15:49:14] 2025-10-16 13:48:36,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 15:49:14] 2025-10-16 13:48:36,995 | INFO     | collected zombie processes
[2025-10-16 15:49:14] 2025-10-16 13:48:36,995 | INFO     | will attempt to kill all subprocesses of pid=22403
[2025-10-16 15:49:14] 2025-10-16 13:48:37,098 | INFO     | process IDs to be killed: [22403] (in reverse order)
[2025-10-16 15:49:14] 2025-10-16 13:48:37,841 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 15:49:14] 2025-10-16 13:48:37,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 15:49:14] 2025-10-16 13:48:37,851 | INFO     | did not find any defunct processes belonging to 22403
[2025-10-16 15:49:14] 2025-10-16 13:48:37,854 | INFO     | did not find any defunct processes belonging to 22403
[2025-10-16 15:49:14] 2025-10-16 13:48:37,854 | INFO     | ready for new job
[2025-10-16 15:49:14] 2025-10-16 13:48:37,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 15:49:14] 2025-10-16 13:48:37,856 | INFO     | ***************************************
[2025-10-16 15:49:14] 2025-10-16 13:48:37,856 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 15:49:14] 2025-10-16 13:48:37,856 | INFO     | ***************************************
[2025-10-16 15:49:14] 2025-10-16 13:48:37,856 | INFO     | 
[2025-10-16 15:49:14] 2025-10-16 13:48:37,857 | INFO     | pilot is running in a VM
[2025-10-16 15:49:14] 2025-10-16 13:48:37,857 | INFO     | architecture information:
[2025-10-16 15:49:14] 2025-10-16 13:48:37,873 | INFO     | executing command: cat /etc/os-release
[2025-10-16 15:49:14] 2025-10-16 13:48:38,102 | INFO     | cat /etc/os-release:
[2025-10-16 15:49:14] NAME="CentOS Linux"
[2025-10-16 15:49:14] VERSION="7 (Core)"
[2025-10-16 15:49:14] ID="centos"
[2025-10-16 15:49:14] ID_LIKE="rhel fedora"
[2025-10-16 15:49:14] VERSION_ID="7"
[2025-10-16 15:49:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 15:49:14] ANSI_COLOR="0;31"
[2025-10-16 15:49:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 15:49:14] HOME_URL="https://www.centos.org/"
[2025-10-16 15:49:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 15:49:14] 
[2025-10-16 15:49:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 15:49:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 15:49:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 15:49:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 15:49:14] 
[2025-10-16 15:49:14] 2025-10-16 13:48:38,102 | INFO     | ***************************************
[2025-10-16 15:49:14] 2025-10-16 13:48:38,604 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-10-16 15:49:14] 2025-10-16 13:48:38,846 | INFO     | sufficient remaining disk space (495697526784 B)
[2025-10-16 15:49:14] 2025-10-16 13:48:38,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 15:49:14] 2025-10-16 13:48:38,846 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 15:49:14] 2025-10-16 13:48:38,847 | INFO     | update_server=False
[2025-10-16 15:49:14] 2025-10-16 13:48:38,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 15:49:14] 2025-10-16 13:48:38,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 15:49:14] 2025-10-16 13:48:38,847 | INFO     | aborting loop
[2025-10-16 15:49:14] 2025-10-16 13:48:38,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 15:49:14] 2025-10-16 13:48:38,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 15:49:14] 2025-10-16 13:48:38,901 | INFO     | all data control threads have been joined
[2025-10-16 15:49:14] 2025-10-16 13:48:39,853 | INFO     | [job] job monitor thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:39,856 | INFO     | [job] retrieve thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:39,907 | INFO     | [data] control thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:39,970 | INFO     | all payload control threads have been joined
[2025-10-16 15:49:14] 2025-10-16 13:48:40,502 | INFO     | [payload] validate_post thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:40,517 | INFO     | all job control threads have been joined
[2025-10-16 15:49:14] 2025-10-16 13:48:40,538 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:40,543 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:40,688 | INFO     | [data] copytool_in thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:40,710 | INFO     | [job] validate thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:40,731 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:40,854 | INFO     | [data] copytool_out thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:40,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 15:49:14] 2025-10-16 13:48:40,979 | INFO     | [payload] control thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:41,189 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:41,295 | INFO     | [payload] failed_post thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:41,523 | INFO     | [job] control thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:41,916 | INFO     | [job] queue monitor thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:48:42,860 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 15:49:14] 2025-10-16 13:49:04,083 | INFO     | [monitor] cgroup control has ended
[2025-10-16 15:49:14] 2025-10-16 13:49:04,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139882420868928)>', '<ExcThread(monitor, started 139881841944320)>']
[2025-10-16 15:49:14] 2025-10-16 13:49:08,685 | INFO     | PID=15868 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-16 15:49:14] 2025-10-16 13:49:08,685 | INFO     | .. there are 9 such processes running
[2025-10-16 15:49:14] 2025-10-16 13:49:08,686 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 15:49:14] 2025-10-16 13:49:08,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 15:49:14] 2025-10-16 13:49:08,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 15:49:14] 2025-10-16 13:49:08,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 15:49:14] 2025-10-16 13:49:08,687 | INFO     | [monitor] control thread has ended
[2025-10-16 15:49:14] 2025-10-16 13:49:09,577 | INFO     | all workflow threads have been joined
[2025-10-16 15:49:14] 2025-10-16 13:49:09,577 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 15:49:14] 2025-10-16 13:49:09,578 | INFO     | traces error code: 0
[2025-10-16 15:49:14] 2025-10-16 13:49:09,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 15:49:14] 2025-10-16 13:49:09,949 [wrapper] ==== pilot stdout END ====
[2025-10-16 15:49:14] 2025-10-16 13:49:10,091 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 15:49:14] 2025-10-16 13:49:10,187 [wrapper] pilotpid: 15868
[2025-10-16 15:49:14] 2025-10-16 13:49:10,238 [wrapper] Pilot exit status: 0
[2025-10-16 15:49:14] 2025-10-16 13:49:10,679 [wrapper] pandaids: 6846777154
[2025-10-16 15:49:14] 2025-10-16 13:49:11,663 [wrapper] cleanup supervisor_pilot 14092 15869
[2025-10-16 15:49:14] 2025-10-16 13:49:11,769 [wrapper] Test setup, not cleaning
[2025-10-16 15:49:14] 2025-10-16 13:49:11,830 [wrapper] apfmon messages muted
[2025-10-16 15:49:14] 2025-10-16 13:49:11,913 [wrapper] ==== wrapper stdout END ====
[2025-10-16 15:49:14] 2025-10-16 13:49:11,994 [wrapper] ==== wrapper stderr END ====
[2025-10-16 15:49:14]  *** Error codes and diagnostics ***
[2025-10-16 15:49:14]     "exeErrorCode": 0,
[2025-10-16 15:49:14]     "exeErrorDiag": "",
[2025-10-16 15:49:14]     "pilotErrorCode": 0,
[2025-10-16 15:49:14]     "pilotErrorDiag": "",
[2025-10-16 15:49:14]  *** Listing of results directory ***
[2025-10-16 15:49:14] total 432872
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc    557409 Oct 16 02:32 pilot3.tar.gz
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc      5112 Oct 16 02:53 queuedata.json
[2025-10-16 15:49:14] -rwx------. 1 boinc boinc     36292 Oct 16 02:55 runpilot2-wrapper.sh
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc       100 Oct 16 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 15:49:14] -rwxr-xr-x. 1 boinc boinc      7986 Oct 16 11:51 run_atlas
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc       105 Oct 16 11:51 job.xml
[2025-10-16 15:49:14] -rw-r--r--. 2 boinc boinc 229750348 Oct 16 11:51 EVNT.46771634._000050.pool.root.1
[2025-10-16 15:49:14] -rw-r--r--. 2 boinc boinc     15120 Oct 16 11:51 start_atlas.sh
[2025-10-16 15:49:14] drwxrwx--x. 2 boinc boinc        68 Oct 16 11:51 shared
[2025-10-16 15:49:14] -rw-r--r--. 2 boinc boinc    569677 Oct 16 11:51 input.tar.gz
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc      6391 Oct 16 11:51 init_data.xml
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc         0 Oct 16 11:51 boinc_lockfile
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc      2552 Oct 16 11:52 pandaJob.out
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc    978169 Oct 16 11:55 agis_schedconf.cvmfs.json
[2025-10-16 15:49:14] drwx------. 5 boinc boinc      4096 Oct 16 11:55 pilot3
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc 204943781 Oct 16 15:45 HITS.46771637._005593.pool.root.1
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc       531 Oct 16 15:46 boinc_task_state.xml
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc      1014 Oct 16 15:47 memory_monitor_summary.json
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc   1560740 Oct 16 15:47 agis_ddmendpoints.agis.ALL.json
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc    458517 Oct 16 15:47 log.46771637._005593.job.log.tgz.1
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc      7777 Oct 16 15:48 heartbeat.json
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc      8192 Oct 16 15:49 boinc_mmap_file
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc        28 Oct 16 15:49 wrapper_checkpoint.txt
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc        95 Oct 16 15:49 pilot_heartbeat.json
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc      4885 Oct 16 15:49 pilotlog.txt
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc   1880875 Oct 16 15:49 log.46771637._005593.job.log.1
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc       357 Oct 16 15:49 output.list
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc       620 Oct 16 15:49 runtime_log
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc   2355200 Oct 16 15:49 result.tar.gz
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc       657 Oct 16 15:49 vyiMDm4RRT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmG9WMDmcDRQnn.diag
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc      8717 Oct 16 15:49 runtime_log.err
[2025-10-16 15:49:14] -rw-r--r--. 1 boinc boinc     20814 Oct 16 15:49 stderr.txt
[2025-10-16 15:49:14] HITS file was successfully produced:
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc 204943781 Oct 16 15:45 shared/HITS.pool.root.1
[2025-10-16 15:49:14]  *** Contents of shared directory: ***
[2025-10-16 15:49:14] total 427388
[2025-10-16 15:49:14] -rw-r--r--. 2 boinc boinc 229750348 Oct 16 11:51 ATLAS.root_0
[2025-10-16 15:49:14] -rw-r--r--. 2 boinc boinc     15120 Oct 16 11:51 start_atlas.sh
[2025-10-16 15:49:14] -rw-r--r--. 2 boinc boinc    569677 Oct 16 11:51 input.tar.gz
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc 204943781 Oct 16 15:45 HITS.pool.root.1
[2025-10-16 15:49:14] -rw-------. 1 boinc boinc   2355200 Oct 16 15:49 result.tar.gz
15:49:15 (12030): run_atlas exited; CPU time 51383.250864
15:49:15 (12030): called boinc_finish(0)

</stderr_txt>
]]>

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