Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:52:55 (3709997): wrapper (7.7.26015): starting
07:52:55 (3709997): wrapper: running run_atlas (--nthreads 3)
[2025-10-16 07:52:55] Arguments: --nthreads 3
[2025-10-16 07:52:55] Threads: 3
[2025-10-16 07:52:55] Checking for CVMFS
[2025-10-16 07:52:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 07:52:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 07:52:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 07:52:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 07:52:55] 2.9.2.0 3608131 368 59980 151760 3 57 4600903 36864001 0 130560 0 268389 99.984 14776 1506 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-16 07:52:55] CVMFS is ok
[2025-10-16 07:52:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 07:52:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 07:52:55] Further information can be found at the LHC@home message board.
[2025-10-16 07:52:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 07:52:55] Checking for apptainer binary...
[2025-10-16 07:52:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 07:52:55] Running /usr/bin/apptainer --version
[2025-10-16 07:52:55] apptainer version 1.4.1-1.1
[2025-10-16 07:52:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 07:52:56] cosA121b
[2025-10-16 07:52:56] apptainer works
[2025-10-16 07:52:56] Set ATHENA_PROC_NUMBER=3
[2025-10-16 07:52:56] Set ATHENA_CORE_NUMBER=3
[2025-10-16 07:52:56] Starting ATLAS job with PandaID=6846771073
[2025-10-16 07:52:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 09:24:13]  *** The last 200 lines of the pilot log: ***
[2025-10-16 09:24:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/d4/log.46771637._002151.job.log.tgz.1
[2025-10-16 09:24:13]  workdir=None
[2025-10-16 09:24:13] ]
[2025-10-16 09:24:13] 2025-10-16 07:23:22,430 | INFO     | transferring file log.46771637._002151.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6846771073/log.46771637._002151.job.log.tgz.1 to /local/data/boinc/
[2025-10-16 09:24:13] 2025-10-16 07:23:22,430 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6846771073/log.46771637._002151.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._0021
[2025-10-16 09:24:13] 2025-10-16 07:23:22,442 | INFO     | adding to output.list: log.46771637._002151.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/d4/log.46771637._002151.job.log.tg
[2025-10-16 09:24:13] 2025-10-16 07:23:22,442 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-16 09:24:13] 2025-10-16 07:23:22,442 | INFO     | summary of transferred files:
[2025-10-16 09:24:13] 2025-10-16 07:23:22,442 | INFO     |  -- lfn=log.46771637._002151.job.log.tgz.1, status_code=0, status=transferred
[2025-10-16 09:24:13] 2025-10-16 07:23:22,442 | INFO     | stage-out finished correctly
[2025-10-16 09:24:13] 2025-10-16 07:23:23,035 | INFO     | time since job start (5421s) is within the limit (172800.0s)
[2025-10-16 09:24:13] 2025-10-16 07:23:24,273 | INFO     | monitor loop #417: job 0:6846771073 is in state 'finished'
[2025-10-16 09:24:13] 2025-10-16 07:23:24,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 09:24:13] 2025-10-16 07:23:25,041 | INFO     | time since job start (5423s) is within the limit (172800.0s)
[2025-10-16 09:24:13] 2025-10-16 07:23:25,599 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-16 09:24:13] 2025-10-16 07:23:26,777 | INFO     | monitor loop #418: job 0:6846771073 is in state 'finished'
[2025-10-16 09:24:13] 2025-10-16 07:23:26,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 09:24:13] 2025-10-16 07:23:27,042 | INFO     | time since job start (5425s) is within the limit (172800.0s)
[2025-10-16 09:24:13] 2025-10-16 07:23:27,377 | INFO     | job 6846771073 has state=finished
[2025-10-16 09:24:13] 2025-10-16 07:23:27,377 | INFO     | preparing for final server update for job 6846771073 in state='finished'
[2025-10-16 09:24:13] 2025-10-16 07:23:27,377 | INFO     | this job has now completed (state=finished)
[2025-10-16 09:24:13] 2025-10-16 07:23:27,378 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-16 09:24:13] 2025-10-16 07:23:27,378 | INFO     | log transfer has been attempted: DONE
[2025-10-16 09:24:13] 2025-10-16 07:23:27,378 | INFO     | job 6846771073 has finished - writing final server update
[2025-10-16 09:24:13] 2025-10-16 07:23:27,378 | INFO     | total number of processed events: 400 (read)
[2025-10-16 09:24:13] 2025-10-16 07:23:27,379 | INFO     | executing command: lscpu
[2025-10-16 09:24:13] 2025-10-16 07:23:27,395 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-16 09:24:13] 2025-10-16 07:23:29,048 | INFO     | time since job start (5427s) is within the limit (172800.0s)
[2025-10-16 09:24:13] 2025-10-16 07:23:29,048 | INFO     | 5428s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-16 09:24:13] 2025-10-16 07:23:29,280 | INFO     | monitor loop #419: job 0:6846771073 is in state 'finished'
[2025-10-16 09:24:13] 2025-10-16 07:23:29,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 09:24:13] 2025-10-16 07:23:31,054 | INFO     | time since job start (5429s) is within the limit (172800.0s)
[2025-10-16 09:24:13] 2025-10-16 07:23:31,783 | INFO     | monitor loop #420: job 0:6846771073 is in state 'finished'
[2025-10-16 09:24:13] 2025-10-16 07:23:31,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 09:24:13] 2025-10-16 07:23:32,346 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-16 09:24:13] 2025-10-16 07:23:32,347 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3479.7613333333334
[2025-10-16 09:24:13] 2025-10-16 07:23:32,348 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6846771073/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 09:24:13] 2025-10-16 07:23:32,349 | INFO     | extracted standard info from prmon json
[2025-10-16 09:24:13] 2025-10-16 07:23:32,349 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 09:24:13] 2025-10-16 07:23:32,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 09:24:13] 2025-10-16 07:23:32,349 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 09:24:13] 2025-10-16 07:23:32,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | fitting pss+swap vs Time
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | sum of square deviations: 170944600.5
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | sum of deviations: -3860871353.0
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | mean x: 1760596776.5
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | mean y: 2392938.8292682925
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | -- intersect: 39766372840.45239
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | intersect: 39766372840.45239
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | chi2: 0.09405518048276837
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | -- intersect: 39766372840.45239
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | current memory leak: -22.59 B/s (using 82 data points, chi2=0.09)
[2025-10-16 09:24:13] 2025-10-16 07:23:32,350 | INFO     | could have reported an average CPU frequency of 3812 MHz (6 samples)
[2025-10-16 09:24:13] 2025-10-16 07:23:32,351 | INFO     | ..............................
[2025-10-16 09:24:13] 2025-10-16 07:23:32,351 | INFO     | . Timing measurements:
[2025-10-16 09:24:13] 2025-10-16 07:23:32,351 | INFO     | . get job = 0 s
[2025-10-16 09:24:13] 2025-10-16 07:23:32,351 | INFO     | . initial setup = 1 s
[2025-10-16 09:24:13] 2025-10-16 07:23:32,351 | INFO     | . payload setup = 2 s
[2025-10-16 09:24:13] 2025-10-16 07:23:32,351 | INFO     | . stage-in = 0 s
[2025-10-16 09:24:13] 2025-10-16 07:23:32,351 | INFO     | . payload execution = 5401 s
[2025-10-16 09:24:13] 2025-10-16 07:23:32,351 | INFO     | . stage-out = 0 s
[2025-10-16 09:24:13] 2025-10-16 07:23:32,351 | INFO     | . log creation = 0 s
[2025-10-16 09:24:13] 2025-10-16 07:23:32,351 | INFO     | ..............................
[2025-10-16 09:24:13] 2025-10-16 07:23:32,526 | INFO     | 
[2025-10-16 09:24:13] 2025-10-16 07:23:32,526 | INFO     | job summary report
[2025-10-16 09:24:13] 2025-10-16 07:23:32,526 | INFO     | --------------------------------------------------
[2025-10-16 09:24:13] 2025-10-16 07:23:32,526 | INFO     | PanDA job id: 6846771073
[2025-10-16 09:24:13] 2025-10-16 07:23:32,526 | INFO     | task id: 46771637
[2025-10-16 09:24:13] 2025-10-16 07:23:32,526 | INFO     | errors: (none)
[2025-10-16 09:24:13] 2025-10-16 07:23:32,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | pilot state: finished 
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | transexitcode: 0
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | exeerrorcode: 0
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | exeerrordiag: 
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | exitcode: 0
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | exitmsg: OK
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | cpuconsumptiontime: 15464 s
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | nevents: 400
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | neventsw: 0
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | pid: 3720151
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | pgrp: 3720151
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | corecount: 3
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | event service: False
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | sizes: {0: 2348916, 2: 2349178, 11: 2349206, 5407: 2384881, 5410: 2384881, 5417: 2385075}
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | --------------------------------------------------
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | 
[2025-10-16 09:24:13] 2025-10-16 07:23:32,527 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,540 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,541 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 09:24:13] 2025-10-16 07:23:32,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,541 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 09:24:13] 2025-10-16 07:23:32,541 | INFO     | job 6846771073 has completed (purged errors)
[2025-10-16 09:24:13] 2025-10-16 07:23:32,541 | INFO     | overall cleanup function is called
[2025-10-16 09:24:13] 2025-10-16 07:23:33,547 | INFO     | --- collectZombieJob: --- 10, [3720151]
[2025-10-16 09:24:13] 2025-10-16 07:23:33,548 | INFO     | zombie collector waiting for pid 3720151
[2025-10-16 09:24:13] 2025-10-16 07:23:33,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 09:24:13] 2025-10-16 07:23:33,548 | INFO     | collected zombie processes
[2025-10-16 09:24:13] 2025-10-16 07:23:33,548 | INFO     | will attempt to kill all subprocesses of pid=3720151
[2025-10-16 09:24:13] 2025-10-16 07:23:33,591 | INFO     | process IDs to be killed: [3720151] (in reverse order)
[2025-10-16 09:24:13] 2025-10-16 07:23:33,614 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 09:24:13] 2025-10-16 07:23:33,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 09:24:13] 2025-10-16 07:23:33,616 | INFO     | did not find any defunct processes belonging to 3720151
[2025-10-16 09:24:13] 2025-10-16 07:23:33,617 | INFO     | did not find any defunct processes belonging to 3720151
[2025-10-16 09:24:13] 2025-10-16 07:23:33,617 | INFO     | ready for new job
[2025-10-16 09:24:13] 2025-10-16 07:23:33,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 09:24:13] 2025-10-16 07:23:33,618 | INFO     | ***************************************
[2025-10-16 09:24:13] 2025-10-16 07:23:33,618 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 09:24:13] 2025-10-16 07:23:33,618 | INFO     | ***************************************
[2025-10-16 09:24:13] 2025-10-16 07:23:33,618 | INFO     | 
[2025-10-16 09:24:13] 2025-10-16 07:23:33,619 | INFO     | architecture information:
[2025-10-16 09:24:13] 2025-10-16 07:23:33,619 | INFO     | executing command: cat /etc/os-release
[2025-10-16 09:24:13] 2025-10-16 07:23:33,627 | INFO     | cat /etc/os-release:
[2025-10-16 09:24:13] NAME="CentOS Linux"
[2025-10-16 09:24:13] VERSION="7 (Core)"
[2025-10-16 09:24:13] ID="centos"
[2025-10-16 09:24:13] ID_LIKE="rhel fedora"
[2025-10-16 09:24:13] VERSION_ID="7"
[2025-10-16 09:24:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 09:24:13] ANSI_COLOR="0;31"
[2025-10-16 09:24:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 09:24:13] HOME_URL="https://www.centos.org/"
[2025-10-16 09:24:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 09:24:13] 
[2025-10-16 09:24:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 09:24:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 09:24:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 09:24:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 09:24:13] 
[2025-10-16 09:24:13] 2025-10-16 07:23:33,627 | INFO     | ***************************************
[2025-10-16 09:24:13] 2025-10-16 07:23:34,130 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-16 09:24:13] 2025-10-16 07:23:34,143 | INFO     | sufficient remaining disk space (355986309120 B)
[2025-10-16 09:24:13] 2025-10-16 07:23:34,143 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 09:24:13] 2025-10-16 07:23:34,143 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 09:24:13] 2025-10-16 07:23:34,143 | INFO     | update_server=False
[2025-10-16 09:24:13] 2025-10-16 07:23:34,143 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 09:24:13] 2025-10-16 07:23:34,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 09:24:13] 2025-10-16 07:23:34,152 | INFO     | all job control threads have been joined
[2025-10-16 09:24:13] 2025-10-16 07:23:34,287 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-16 09:24:13] 2025-10-16 07:23:34,288 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-16 09:24:13] 2025-10-16 07:23:34,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 09:24:13] 2025-10-16 07:23:34,288 | INFO     | will abort loop
[2025-10-16 09:24:13] 2025-10-16 07:23:35,053 | INFO     | all data control threads have been joined
[2025-10-16 09:24:13] 2025-10-16 07:23:35,149 | INFO     | [job] retrieve thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:35,149 | INFO     | [job] queue monitor thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:35,158 | INFO     | [job] control thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:35,180 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:35,180 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:35,293 | INFO     | [job] job monitor thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:35,482 | INFO     | [payload] failed_post thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:35,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 09:24:13] 2025-10-16 07:23:35,578 | INFO     | all payload control threads have been joined
[2025-10-16 09:24:13] 2025-10-16 07:23:36,011 | INFO     | [payload] validate_post thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:36,034 | INFO     | [data] copytool_in thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:36,058 | INFO     | [data] control thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:36,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 09:24:13] 2025-10-16 07:23:36,528 | INFO     | [job] validate thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:36,584 | INFO     | [payload] control thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:36,652 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:37,494 | INFO     | [data] copytool_out thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:40,148 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:23:44,949 | INFO     | job.realtimelogging is not enabled
[2025-10-16 09:24:13] 2025-10-16 07:23:45,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 09:24:13] 2025-10-16 07:24:04,155 | INFO     | PID=3713714 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-16 09:24:13] 2025-10-16 07:24:04,155 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 09:24:13] 2025-10-16 07:24:04,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 09:24:13] 2025-10-16 07:24:04,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 09:24:13] 2025-10-16 07:24:07,621 | INFO     | [monitor] cgroup control has ended
[2025-10-16 09:24:13] 2025-10-16 07:24:08,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884175726400)>', '<ExcThread(monitor, started 139883821639424)>']
[2025-10-16 09:24:13] 2025-10-16 07:24:09,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 09:24:13] 2025-10-16 07:24:09,181 | INFO     | [monitor] control thread has ended
[2025-10-16 09:24:13] 2025-10-16 07:24:13,630 | INFO     | all workflow threads have been joined
[2025-10-16 09:24:13] 2025-10-16 07:24:13,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 09:24:13] 2025-10-16 07:24:13,630 | INFO     | traces error code: 0
[2025-10-16 09:24:13] 2025-10-16 07:24:13,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 09:24:13] 2025-10-16 07:24:13,677 [wrapper] ==== pilot stdout END ====
[2025-10-16 09:24:13] 2025-10-16 07:24:13,680 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 09:24:13] 2025-10-16 07:24:13,682 [wrapper] pilotpid: 3713714
[2025-10-16 09:24:13] 2025-10-16 07:24:13,684 [wrapper] Pilot exit status: 0
[2025-10-16 09:24:13] 2025-10-16 07:24:13,691 [wrapper] pandaids: 6846771073
[2025-10-16 09:24:13] 2025-10-16 07:24:13,707 [wrapper] cleanup supervisor_pilot 3732197 3713715
[2025-10-16 09:24:13] 2025-10-16 07:24:13,709 [wrapper] Test setup, not cleaning
[2025-10-16 09:24:13] 2025-10-16 07:24:13,712 [wrapper] apfmon messages muted
[2025-10-16 09:24:13] 2025-10-16 07:24:13,714 [wrapper] ==== wrapper stdout END ====
[2025-10-16 09:24:13] 2025-10-16 07:24:13,716 [wrapper] ==== wrapper stderr END ====
[2025-10-16 09:24:13]  *** Error codes and diagnostics ***
[2025-10-16 09:24:13]     "exeErrorCode": 0,
[2025-10-16 09:24:13]     "exeErrorDiag": "",
[2025-10-16 09:24:13]     "pilotErrorCode": 0,
[2025-10-16 09:24:13]     "pilotErrorDiag": "",
[2025-10-16 09:24:13]  *** Listing of results directory ***
[2025-10-16 09:24:13] total 427700
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc    557409 Oct 16 01:33 pilot3.tar.gz
[2025-10-16 09:24:13] -rwx------ 1 boinc boinc     36292 Oct 16 01:46 runpilot2-wrapper.sh
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc      5112 Oct 16 01:49 queuedata.json
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc       100 Oct 16 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 09:24:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 07:52 run_atlas
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc       105 Oct 16 07:52 job.xml
[2025-10-16 09:24:13] -rw-r--r-- 2 boinc boinc 227642315 Oct 16 07:52 EVNT.46771634._000188.pool.root.1
[2025-10-16 09:24:13] -rw-r--r-- 2 boinc boinc    569672 Oct 16 07:52 input.tar.gz
[2025-10-16 09:24:13] -rw-r--r-- 2 boinc boinc     15120 Oct 16 07:52 start_atlas.sh
[2025-10-16 09:24:13] drwxrwx--x 2 boinc boinc      4096 Oct 16 07:52 shared
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc         0 Oct 16 07:52 boinc_setup_complete
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc      6440 Oct 16 07:52 init_data.xml
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc         0 Oct 16 07:52 boinc_lockfile
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc      2549 Oct 16 07:52 pandaJob.out
[2025-10-16 09:24:13] -rw------- 1 boinc boinc    973556 Oct 16 07:53 agis_schedconf.cvmfs.json
[2025-10-16 09:24:13] -rw------- 1 boinc boinc   1560740 Oct 16 07:53 agis_ddmendpoints.agis.ALL.json
[2025-10-16 09:24:13] drwx------ 5 boinc boinc      4096 Oct 16 07:53 pilot3
[2025-10-16 09:24:13] -rw------- 1 boinc boinc 204343336 Oct 16 09:23 HITS.46771637._002151.pool.root.1
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc       529 Oct 16 09:23 boinc_task_state.xml
[2025-10-16 09:24:13] -rw------- 1 boinc boinc      1022 Oct 16 09:23 memory_monitor_summary.json
[2025-10-16 09:24:13] -rw------- 1 boinc boinc    246179 Oct 16 09:23 log.46771637._002151.job.log.tgz.1
[2025-10-16 09:24:13] -rw------- 1 boinc boinc        95 Oct 16 09:23 pilot_heartbeat.json
[2025-10-16 09:24:13] -rw------- 1 boinc boinc      7758 Oct 16 09:23 heartbeat.json
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc      8192 Oct 16 09:23 boinc_mmap_file
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc        27 Oct 16 09:23 wrapper_checkpoint.txt
[2025-10-16 09:24:13] -rw------- 1 boinc boinc      5010 Oct 16 09:24 pilotlog.txt
[2025-10-16 09:24:13] -rw------- 1 boinc boinc    791820 Oct 16 09:24 log.46771637._002151.job.log.1
[2025-10-16 09:24:13] -rw------- 1 boinc boinc       357 Oct 16 09:24 output.list
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc       620 Oct 16 09:24 runtime_log
[2025-10-16 09:24:13] -rw------- 1 boinc boinc   1054720 Oct 16 09:24 result.tar.gz
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc      8787 Oct 16 09:24 runtime_log.err
[2025-10-16 09:24:13] -rw------- 1 boinc boinc       660 Oct 16 09:24 LSTNDm9MQT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0EoNDmB61Msn.diag
[2025-10-16 09:24:13] -rw-r--r-- 1 boinc boinc     22250 Oct 16 09:24 stderr.txt
[2025-10-16 09:24:13] HITS file was successfully produced:
[2025-10-16 09:24:13] -rw------- 1 boinc boinc 204343336 Oct 16 09:23 shared/HITS.pool.root.1
[2025-10-16 09:24:13]  *** Contents of shared directory: ***
[2025-10-16 09:24:13] total 423480
[2025-10-16 09:24:13] -rw-r--r-- 2 boinc boinc 227642315 Oct 16 07:52 ATLAS.root_0
[2025-10-16 09:24:13] -rw-r--r-- 2 boinc boinc    569672 Oct 16 07:52 input.tar.gz
[2025-10-16 09:24:13] -rw-r--r-- 2 boinc boinc     15120 Oct 16 07:52 start_atlas.sh
[2025-10-16 09:24:13] -rw------- 1 boinc boinc 204343336 Oct 16 09:23 HITS.pool.root.1
[2025-10-16 09:24:13] -rw------- 1 boinc boinc   1054720 Oct 16 09:24 result.tar.gz
09:24:14 (3709997): run_atlas exited; CPU time 15486.495012
09:24:14 (3709997): called boinc_finish(0)

</stderr_txt>
]]>

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