Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:22:50 (3912): wrapper (7.7.26015): starting
02:22:50 (3912): wrapper: running run_atlas (--nthreads 4)
[2025-10-16 02:22:50] Arguments: --nthreads 4
[2025-10-16 02:22:50] Threads: 4
[2025-10-16 02:22:50] Checking for CVMFS
[2025-10-16 02:23:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 02:24:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 02:24:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 02:24:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 02:24:10] 2.11.5.0 4134 1 23608 151754 3 1 2137221 4194305 0 130560 0 0 0.000 1291 152 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-16 02:24:10] CVMFS is ok
[2025-10-16 02:24:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 02:24:10] Checking for apptainer binary...
[2025-10-16 02:24:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 02:24:10] Running /usr/bin/apptainer --version
[2025-10-16 02:24:10] apptainer version 1.0.3
[2025-10-16 02:24:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 02:24:11] TeeC25
[2025-10-16 02:24:11] apptainer works
[2025-10-16 02:24:11] Set ATHENA_PROC_NUMBER=4
[2025-10-16 02:24:11] Set ATHENA_CORE_NUMBER=4
[2025-10-16 02:24:11] Starting ATLAS job with PandaID=6846773936
[2025-10-16 02:24:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 03:51:09]  *** The last 200 lines of the pilot log: ***
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | intersect: 17507225.011714444
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | chi2: 1.1481579785181555e-07
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | -- intersect: 17507225.011714444
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | current memory leak: -0.01 B/s (using 66 data points, chi2=0.00)
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | could have reported an average CPU frequency of 3262 MHz (6 samples)
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | ..............................
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | . Timing measurements:
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . get job = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . initial setup = 11 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . payload setup = 4 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . stage-in = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . payload execution = 4420 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . stage-out = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . log creation = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | ..............................
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-6846773936/pilotlog.txt
[2025-10-16 03:51:09] 2025-10-16 02:50:19,907 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-16 03:51:09] - Log from pilotlog.txt -
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | mean x: 1760580266.5
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | mean y: 1232338.5
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | -- intersect: 17507225.011714444
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | intersect: 17507225.011714444
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | chi2: 1.1481579785181555e-07
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | -- intersect: 17507225.011714444
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | current memory leak: -0.01 B/s (using 66 data points, chi2=0.00)
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | could have reported an average CPU frequency of 3262 MHz (6 samples)
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | ..............................
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | . Timing measurements:
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . get job = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . initial setup = 11 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . payload setup = 4 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . stage-in = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . payload execution = 4420 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . stage-out = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . log creation = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | ..............................
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-6846773936/pilotlog.txt
[2025-10-16 03:51:09] 2025-10-16 02:50:19,907 | WARNING  | 
[2025-10-16 03:51:09] [begin log extracts]
[2025-10-16 03:51:09] - Log from pilotlog.txt -
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | mean x: 1760580266.5
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | mean y: 1232338.5
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | -- intersect: 17507225.011714444
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | intersect: 17507225.011714444
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | chi2: 1.1481579785181555e-07
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | -- intersect: 17507225.011714444
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | current memory leak: -0.01 B/s (using 66 data points, chi2=0.00)
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | could have reported an average CPU frequency of 3262 MHz (6 samples)
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | ..............................
[2025-10-16 03:51:09] 2025-10-16 02:50:19,901 | INFO     | . Timing measurements:
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . get job = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . initial setup = 11 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . payload setup = 4 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . stage-in = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . payload execution = 4420 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . stage-out = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | . log creation = 0 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | ..............................
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-16 03:51:09] 2025-10-16 02:50:19,902 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-6846773936/pilotlog.txt
[2025-10-16 03:51:09] [end log extracts]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,908 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-16 03:51:09] 2025-10-16 02:50:19,908 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-16 03:51:09] 2025-10-16 02:50:19,953 | INFO     | 
[2025-10-16 03:51:09] 2025-10-16 02:50:19,953 | INFO     | job summary report
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | --------------------------------------------------
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | PanDA job id: 6846773936
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | task id: 46771637
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-16 03:39:52,609 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | pilot state: failed 
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | transexitcode: 65
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | exeerrorcode: 65
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "GeoModelSvc                                                      FATAL in
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | exitcode: 65
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "GeoModelSvc                                                      FATAL in sysI
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | cpuconsumptiontime: 52 s
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | nevents: 0
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | neventsw: 0
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | pid: 14592
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | pgrp: 14592
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | corecount: 4
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | event service: False
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | sizes: {0: 2348093, 1: 2348948, 3: 2349210, 11: 2349238, 4667: 2383860, 4668: 2388342, 5049: 2388480}
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | --------------------------------------------------
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | 
[2025-10-16 03:51:09] 2025-10-16 02:50:19,954 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,963 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,963 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,963 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,963 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,963 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 03:51:09] 2025-10-16 02:50:19,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,963 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 03:51:09] 2025-10-16 02:50:19,963 | INFO     | job 6846773936 has completed (purged errors)
[2025-10-16 03:51:09] 2025-10-16 02:50:19,963 | INFO     | overall cleanup function is called
[2025-10-16 03:51:09] 2025-10-16 02:50:20,969 | INFO     | --- collectZombieJob: --- 10, [14592]
[2025-10-16 03:51:09] 2025-10-16 02:50:20,969 | INFO     | zombie collector waiting for pid 14592
[2025-10-16 03:51:09] 2025-10-16 02:50:20,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 03:51:09] 2025-10-16 02:50:20,970 | INFO     | collected zombie processes
[2025-10-16 03:51:09] 2025-10-16 02:50:20,970 | INFO     | will attempt to kill all subprocesses of pid=14592
[2025-10-16 03:51:09] 2025-10-16 02:50:21,014 | INFO     | process IDs to be killed: [14592] (in reverse order)
[2025-10-16 03:51:09] 2025-10-16 02:50:21,031 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 03:51:09] 2025-10-16 02:50:21,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 03:51:09] 2025-10-16 02:50:21,032 | INFO     | did not find any defunct processes belonging to 14592
[2025-10-16 03:51:09] 2025-10-16 02:50:21,033 | INFO     | did not find any defunct processes belonging to 14592
[2025-10-16 03:51:09] 2025-10-16 02:50:21,033 | INFO     | ready for new job
[2025-10-16 03:51:09] 2025-10-16 02:50:21,033 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 03:51:09] 2025-10-16 02:50:21,034 | INFO     | ***************************************
[2025-10-16 03:51:09] 2025-10-16 02:50:21,034 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 03:51:09] 2025-10-16 02:50:21,034 | INFO     | ***************************************
[2025-10-16 03:51:09] 2025-10-16 02:50:21,034 | INFO     | 
[2025-10-16 03:51:09] 2025-10-16 02:50:21,052 | INFO     | architecture information:
[2025-10-16 03:51:09] 2025-10-16 02:50:21,052 | INFO     | executing command: cat /etc/os-release
[2025-10-16 03:51:09] 2025-10-16 02:50:21,061 | INFO     | cat /etc/os-release:
[2025-10-16 03:51:09] NAME="CentOS Linux"
[2025-10-16 03:51:09] VERSION="7 (Core)"
[2025-10-16 03:51:09] ID="centos"
[2025-10-16 03:51:09] ID_LIKE="rhel fedora"
[2025-10-16 03:51:09] VERSION_ID="7"
[2025-10-16 03:51:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 03:51:09] ANSI_COLOR="0;31"
[2025-10-16 03:51:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 03:51:09] HOME_URL="https://www.centos.org/"
[2025-10-16 03:51:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 03:51:09] 
[2025-10-16 03:51:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 03:51:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 03:51:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 03:51:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 03:51:09] 
[2025-10-16 03:51:09] 2025-10-16 02:50:21,061 | INFO     | ***************************************
[2025-10-16 03:51:09] 2025-10-16 02:50:21,564 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-16 03:51:09] 2025-10-16 02:50:21,576 | INFO     | sufficient remaining disk space (419990339584 B)
[2025-10-16 03:51:09] 2025-10-16 02:50:21,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 03:51:09] 2025-10-16 02:50:21,577 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 03:51:09] 2025-10-16 02:50:21,577 | INFO     | update_server=False
[2025-10-16 03:51:09] 2025-10-16 02:50:21,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 03:51:09] 2025-10-16 02:50:21,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 03:51:09] 2025-10-16 02:50:21,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 03:51:09] 2025-10-16 02:50:21,577 | INFO     | aborting loop
[2025-10-16 03:51:09] 2025-10-16 02:50:21,764 | INFO     | all payload control threads have been joined
[2025-10-16 03:51:09] 2025-10-16 02:50:22,317 | INFO     | all data control threads have been joined
[2025-10-16 03:51:09] 2025-10-16 02:50:22,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 03:51:09] 2025-10-16 02:50:22,511 | INFO     | all job control threads have been joined
[2025-10-16 03:51:09] 2025-10-16 02:50:22,582 | INFO     | [job] retrieve thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:22,583 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:22,584 | INFO     | [job] queue monitor thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:22,584 | INFO     | [job] job monitor thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:22,725 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:22,769 | INFO     | [payload] control thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:22,776 | INFO     | [payload] failed_post thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:22,850 | INFO     | [data] copytool_in thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:23,322 | INFO     | [data] control thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:23,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 03:51:09] 2025-10-16 02:50:23,517 | INFO     | [job] control thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:23,695 | INFO     | [job] validate thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:23,772 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:23,840 | INFO     | [payload] validate_post thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:23,958 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:24,500 | INFO     | [data] copytool_out thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:27,401 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 03:51:09] 2025-10-16 02:50:51,007 | INFO     | 5073s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-16 03:51:09] 2025-10-16 02:50:52,058 | INFO     | PID=8226 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-16 03:51:09] 2025-10-16 02:50:52,058 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 03:51:09] 2025-10-16 02:50:52,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 03:51:09] 2025-10-16 02:50:52,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 03:51:09] 2025-10-16 02:51:03,126 | INFO     | [monitor] cgroup control has ended
[2025-10-16 03:51:09] 2025-10-16 02:51:03,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084234438464)>', '<ExcThread(monitor, started 140083571189504)>']
[2025-10-16 03:51:09] 2025-10-16 02:51:04,119 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 03:51:09] 2025-10-16 02:51:04,120 | INFO     | [monitor] control thread has ended
[2025-10-16 03:51:09] 2025-10-16 02:51:08,968 | INFO     | all workflow threads have been joined
[2025-10-16 03:51:09] 2025-10-16 02:51:08,968 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 03:51:09] 2025-10-16 02:51:08,969 | INFO     | traces error code: 0
[2025-10-16 03:51:09] 2025-10-16 02:51:08,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 03:51:09] 2025-10-16 02:51:09,043 [wrapper] ==== pilot stdout END ====
[2025-10-16 03:51:09] 2025-10-16 02:51:09,044 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 03:51:09] 2025-10-16 02:51:09,045 [wrapper] pilotpid: 8226
[2025-10-16 03:51:09] 2025-10-16 02:51:09,046 [wrapper] Pilot exit status: 0
[2025-10-16 03:51:09] 2025-10-16 02:51:09,059 [wrapper] pandaids: 6846773936
[2025-10-16 03:51:09] 2025-10-16 02:51:09,068 [wrapper] cleanup supervisor_pilot 26084 8227
[2025-10-16 03:51:09] 2025-10-16 02:51:09,069 [wrapper] Test setup, not cleaning
[2025-10-16 03:51:09] 2025-10-16 02:51:09,070 [wrapper] apfmon messages muted
[2025-10-16 03:51:09] 2025-10-16 02:51:09,071 [wrapper] ==== wrapper stdout END ====
[2025-10-16 03:51:09] 2025-10-16 02:51:09,072 [wrapper] ==== wrapper stderr END ====
[2025-10-16 03:51:09]  *** Error codes and diagnostics ***
[2025-10-16 03:51:09]     "exeErrorCode": 65,
[2025-10-16 03:51:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"GeoModelSvc                                                      FATAL in sysInitialize(): standard std::exception is caught\"",
[2025-10-16 03:51:09]     "pilotErrorCode": 1305,
[2025-10-16 03:51:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"GeoModelSvc                                                      FATAL in sysInitia",
[2025-10-16 03:51:09]  *** Listing of results directory ***
[2025-10-16 03:51:09] total 228996
[2025-10-16 03:51:09] -rw-r--r-- 1 m m    557409 Oct 16 00:33 pilot3.tar.gz
[2025-10-16 03:51:09] -rw-r--r-- 1 m m      5112 Oct 16 01:11 queuedata.json
[2025-10-16 03:51:09] -rwx------ 1 m m     36292 Oct 16 01:12 runpilot2-wrapper.sh
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m       100 Oct 16 02:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 03:51:09] -rwxr-xr-x 1 m m      7986 Oct 16 02:22 run_atlas
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m       105 Oct 16 02:22 job.xml
[2025-10-16 03:51:09] -rw-r--r-- 2 m m     15120 Oct 16 02:22 start_atlas.sh
[2025-10-16 03:51:09] drwxrwx--x 2 m m      4096 Oct 16 02:22 shared
[2025-10-16 03:51:09] -rw-r--r-- 2 m m    569673 Oct 16 02:22 input.tar.gz
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m      5880 Oct 16 02:22 init_data.xml
[2025-10-16 03:51:09] -rw-r--r-- 2 m m 228927686 Oct 16 02:22 EVNT.46771634._000260.pool.root.1
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m         0 Oct 16 02:22 boinc_lockfile
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m      2553 Oct 16 02:24 pandaJob.out
[2025-10-16 03:51:09] -rw------- 1 m m    974310 Oct 16 02:25 agis_schedconf.cvmfs.json
[2025-10-16 03:51:09] -rw------- 1 m m   1560740 Oct 16 02:25 agis_ddmendpoints.agis.ALL.json
[2025-10-16 03:51:09] drwx------ 5 m m      4096 Oct 16 02:25 pilot3
[2025-10-16 03:51:09] -rw------- 1 m m      1011 Oct 16 03:39 memory_monitor_summary.json
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m       526 Oct 16 03:40 boinc_task_state.xml
[2025-10-16 03:51:09] -rw------- 1 m m    104129 Oct 16 03:43 log.46771637._003971.job.log.tgz.1
[2025-10-16 03:51:09] -rw------- 1 m m        95 Oct 16 03:50 pilot_heartbeat.json
[2025-10-16 03:51:09] -rw------- 1 m m     15234 Oct 16 03:50 heartbeat.json
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m      8192 Oct 16 03:51 boinc_mmap_file
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m        24 Oct 16 03:51 wrapper_checkpoint.txt
[2025-10-16 03:51:09] -rw------- 1 m m      4860 Oct 16 03:51 pilotlog.txt
[2025-10-16 03:51:09] -rw------- 1 m m    723853 Oct 16 03:51 log.46771637._003971.job.log.1
[2025-10-16 03:51:09] -rw------- 1 m m       188 Oct 16 03:51 output.list
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m       620 Oct 16 03:51 runtime_log
[2025-10-16 03:51:09] -rw------- 1 m m    849920 Oct 16 03:51 result.tar.gz
[2025-10-16 03:51:09] -rw------- 1 m m       633 Oct 16 03:51 ZYKNDmMmQT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsXoNDm2lC6Ao.diag
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m      8465 Oct 16 03:51 runtime_log.err
[2025-10-16 03:51:09] -rw-rw-r-- 1 m m     21568 Oct 16 03:51 stderr.txt
[2025-10-16 03:51:09] No HITS result produced
[2025-10-16 03:51:09]  *** Contents of shared directory: ***
[2025-10-16 03:51:09] total 224976
[2025-10-16 03:51:09] -rw-r--r-- 2 m m     15120 Oct 16 02:22 start_atlas.sh
[2025-10-16 03:51:09] -rw-r--r-- 2 m m    569673 Oct 16 02:22 input.tar.gz
[2025-10-16 03:51:09] -rw-r--r-- 2 m m 228927686 Oct 16 02:22 ATLAS.root_0
[2025-10-16 03:51:09] -rw------- 1 m m    849920 Oct 16 03:51 result.tar.gz
03:51:10 (3912): run_atlas exited; CPU time 83.737679
03:51:10 (3912): called boinc_finish(0)

</stderr_txt>
]]>

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