Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:35:26 (3277): wrapper (7.7.26015): starting
02:35:26 (3277): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 02:35:26] Arguments: --nthreads 4
[2025-10-18 02:35:26] Threads: 4
[2025-10-18 02:35:26] Checking for CVMFS
[2025-10-18 02:35:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 02:35:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 02:35:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 02:35:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 02:35:39] 2.12.7.0 3499 0 25208 151834 3 1 4025728 4194304 0 130560 0 0 0.000 1291 574 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-18 02:35:39] CVMFS is ok
[2025-10-18 02:35:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 02:35:39] Checking for apptainer binary...
[2025-10-18 02:35:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 02:35:39] Running /usr/bin/apptainer --version
[2025-10-18 02:35:40] apptainer version 1.1.0
[2025-10-18 02:35:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 02:35:41] TeeC36
[2025-10-18 02:35:41] apptainer works
[2025-10-18 02:35:41] Set ATHENA_PROC_NUMBER=4
[2025-10-18 02:35:41] Set ATHENA_CORE_NUMBER=4
[2025-10-18 02:35:41] Starting ATLAS job with PandaID=6846773632
[2025-10-18 02:35:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 05:36:45]  *** The last 200 lines of the pilot log: ***
[2025-10-18 05:36:45] 2025-10-18 04:35:56,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 05:36:45] 2025-10-18 04:35:56,655 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 05:36:45] 2025-10-18 04:35:56,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 05:36:45] 2025-10-18 04:35:56,657 | INFO     | fitting pss+swap vs Time
[2025-10-18 05:36:45] 2025-10-18 04:35:56,658 | INFO     | sum of square deviations: 1661798600.0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,658 | INFO     | sufficient remaining disk space (428021383168 B)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,660 | INFO     | sum of deviations: -22102073148.0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,660 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,660 | INFO     | mean x: 1760756773.0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,660 | INFO     | mean y: 2380286.6
[2025-10-18 05:36:45] 2025-10-18 04:35:56,660 | INFO     | -- intersect: 23420606173.107803
[2025-10-18 05:36:45] 2025-10-18 04:35:56,661 | INFO     | intersect: 23420606173.107803
[2025-10-18 05:36:45] 2025-10-18 04:35:56,661 | INFO     | chi2: 2.8287329354070314
[2025-10-18 05:36:45] 2025-10-18 04:35:56,661 | INFO     | sum of square deviations: 1523386702.5
[2025-10-18 05:36:45] 2025-10-18 04:35:56,661 | INFO     | sum of deviations: -11151234228.500002
[2025-10-18 05:36:45] 2025-10-18 04:35:56,662 | INFO     | mean x: 1760756620.5
[2025-10-18 05:36:45] 2025-10-18 04:35:56,662 | INFO     | mean y: 2392095.688235294
[2025-10-18 05:36:45] 2025-10-18 04:35:56,662 | INFO     | -- intersect: 12891180912.313467
[2025-10-18 05:36:45] 2025-10-18 04:35:56,662 | INFO     | intersect: 12891180912.313467
[2025-10-18 05:36:45] 2025-10-18 04:35:56,662 | INFO     | chi2: 2.1890389015115277
[2025-10-18 05:36:45] 2025-10-18 04:35:56,662 | INFO     | current chi2=2.1890389015115277 (change=22.614154411273788 %)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,662 | INFO     | right removable region: 169
[2025-10-18 05:36:45] 2025-10-18 04:35:56,662 | INFO     | sum of square deviations: 1523386702.5
[2025-10-18 05:36:45] 2025-10-18 04:35:56,663 | INFO     | sum of deviations: -53090523419.5
[2025-10-18 05:36:45] 2025-10-18 04:35:56,663 | INFO     | mean x: 1760756925.5
[2025-10-18 05:36:45] 2025-10-18 04:35:56,663 | INFO     | mean y: 2414107.9
[2025-10-18 05:36:45] 2025-10-18 04:35:56,663 | INFO     | -- intersect: 61365367214.88012
[2025-10-18 05:36:45] 2025-10-18 04:35:56,663 | INFO     | intersect: 61365367214.88012
[2025-10-18 05:36:45] 2025-10-18 04:35:56,663 | INFO     | chi2: 0.9995130902896233
[2025-10-18 05:36:45] 2025-10-18 04:35:56,664 | INFO     | size of work directory /home/m/BOINC/slots/0/PanDA_Pilot-6846773632: 3048965 B (within 2537553920 B limit)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,664 | INFO     | current chi2=0.9995130902896233 (change=64.66569615749881 %)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,664 | INFO     | pfn file=/home/m/BOINC/slots/0/PanDA_Pilot-6846773632/HITS.46771637._003696.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,664 | INFO     | sum of square deviations: 1392881930.0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,664 | INFO     | total size of present files: 0 B (workdir size: 3048965 B)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,664 | INFO     | sum of deviations: -45620101537.0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,665 | INFO     | output file size check: skipping output file /home/m/BOINC/slots/0/PanDA_Pilot-6846773632/HITS.46771637._003696.pool.root.1 since it does not exist
[2025-10-18 05:36:45] 2025-10-18 04:35:56,665 | INFO     | mean x: 1760757078.0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,665 | INFO     | mean y: 2405352.175757576
[2025-10-18 05:36:45] 2025-10-18 04:35:56,665 | INFO     | -- intersect: 57671267981.725
[2025-10-18 05:36:45] 2025-10-18 04:35:56,665 | INFO     | intersect: 57671267981.725
[2025-10-18 05:36:45] 2025-10-18 04:35:56,665 | INFO     | chi2: 0.9828544678515961
[2025-10-18 05:36:45] 2025-10-18 04:35:56,665 | INFO     | current chi2=0.9828544678515961 (change=1.6666737634421682 %)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,665 | INFO     | left removable region: 20
[2025-10-18 05:36:45] 2025-10-18 04:35:56,665 | INFO     | sum of square deviations: 1025693650.0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,666 | INFO     | sum of deviations: -17585668833.0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,666 | INFO     | mean x: 1760757200.0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,666 | INFO     | mean y: 2395737.9194630873
[2025-10-18 05:36:45] 2025-10-18 04:35:56,666 | INFO     | -- intersect: 30190837495.865753
[2025-10-18 05:36:45] 2025-10-18 04:35:56,666 | INFO     | intersect: 30190837495.865753
[2025-10-18 05:36:45] 2025-10-18 04:35:56,666 | INFO     | chi2: 0.21493837961423315
[2025-10-18 05:36:45] 2025-10-18 04:35:56,666 | INFO     | -- intersect: 30190837495.865753
[2025-10-18 05:36:45] 2025-10-18 04:35:56,666 | INFO     | current memory leak: -17.15 B/s (using 149 data points, chi2=0.21)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | could have reported an average CPU frequency of 3181 MHz (9 samples)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | ..............................
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | . Timing measurements:
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | . get job = 0 s
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | . initial setup = 35 s
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | . payload setup = 6 s
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | . stage-in = 0 s
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | . payload execution = 10619 s
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | . stage-out = 0 s
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | . log creation = 0 s
[2025-10-18 05:36:45] 2025-10-18 04:35:56,667 | INFO     | ..............................
[2025-10-18 05:36:45] 2025-10-18 04:35:56,711 | INFO     | 
[2025-10-18 05:36:45] 2025-10-18 04:35:56,711 | INFO     | job summary report
[2025-10-18 05:36:45] 2025-10-18 04:35:56,711 | INFO     | --------------------------------------------------
[2025-10-18 05:36:45] 2025-10-18 04:35:56,711 | INFO     | PanDA job id: 6846773632
[2025-10-18 05:36:45] 2025-10-18 04:35:56,711 | INFO     | task id: 46771637
[2025-10-18 05:36:45] 2025-10-18 04:35:56,711 | INFO     | errors: (none)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,711 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 05:36:45] 2025-10-18 04:35:56,711 | INFO     | pilot state: finished 
[2025-10-18 05:36:45] 2025-10-18 04:35:56,712 | INFO     | transexitcode: 0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,712 | INFO     | exeerrorcode: 0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,712 | INFO     | exeerrordiag: 
[2025-10-18 05:36:45] 2025-10-18 04:35:56,712 | INFO     | exitcode: 0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,712 | INFO     | exitmsg: OK
[2025-10-18 05:36:45] 2025-10-18 04:35:56,712 | INFO     | cpuconsumptiontime: 40804 s
[2025-10-18 05:36:45] 2025-10-18 04:35:56,712 | INFO     | nevents: 400
[2025-10-18 05:36:45] 2025-10-18 04:35:56,712 | INFO     | neventsw: 0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,712 | INFO     | pid: 13943
[2025-10-18 05:36:45] 2025-10-18 04:35:56,712 | INFO     | pgrp: 13943
[2025-10-18 05:36:45] 2025-10-18 04:35:56,713 | INFO     | corecount: 4
[2025-10-18 05:36:45] 2025-10-18 04:35:56,713 | INFO     | event service: False
[2025-10-18 05:36:45] 2025-10-18 04:35:56,713 | INFO     | sizes: {0: 2348920, 2: 2349182, 11: 2349210, 10629: 2378120, 10630: 2387116, 10632: 2387172, 10701: 2387586}
[2025-10-18 05:36:45] 2025-10-18 04:35:56,713 | INFO     | --------------------------------------------------
[2025-10-18 05:36:45] 2025-10-18 04:35:56,713 | INFO     | 
[2025-10-18 05:36:45] 2025-10-18 04:35:56,713 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-18 05:36:45] 2025-10-18 04:35:56,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,723 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 05:36:45] 2025-10-18 04:35:56,725 | INFO     | job 6846773632 has completed (purged errors)
[2025-10-18 05:36:45] 2025-10-18 04:35:56,726 | INFO     | overall cleanup function is called
[2025-10-18 05:36:45] 2025-10-18 04:35:56,768 | INFO     | number of running child processes to parent process 13943: 1
[2025-10-18 05:36:45] 2025-10-18 04:35:56,769 | INFO     | maximum number of monitored processes: 6
[2025-10-18 05:36:45] 2025-10-18 04:35:56,769 | INFO     | aborting job monitoring since job object (job id=6846773632) has expired
[2025-10-18 05:36:45] 2025-10-18 04:35:57,733 | INFO     | --- collectZombieJob: --- 10, [13943]
[2025-10-18 05:36:45] 2025-10-18 04:35:57,733 | INFO     | zombie collector waiting for pid 13943
[2025-10-18 05:36:45] 2025-10-18 04:35:57,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 05:36:45] 2025-10-18 04:35:57,734 | INFO     | collected zombie processes
[2025-10-18 05:36:45] 2025-10-18 04:35:57,734 | INFO     | will attempt to kill all subprocesses of pid=13943
[2025-10-18 05:36:45] 2025-10-18 04:35:57,791 | INFO     | process IDs to be killed: [13943] (in reverse order)
[2025-10-18 05:36:45] 2025-10-18 04:35:57,817 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 05:36:45] 2025-10-18 04:35:57,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 05:36:45] 2025-10-18 04:35:57,819 | INFO     | did not find any defunct processes belonging to 13943
[2025-10-18 05:36:45] 2025-10-18 04:35:57,820 | INFO     | did not find any defunct processes belonging to 13943
[2025-10-18 05:36:45] 2025-10-18 04:35:57,820 | INFO     | ready for new job
[2025-10-18 05:36:45] 2025-10-18 04:35:57,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 05:36:45] 2025-10-18 04:35:57,821 | INFO     | ***************************************
[2025-10-18 05:36:45] 2025-10-18 04:35:57,821 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 05:36:45] 2025-10-18 04:35:57,822 | INFO     | ***************************************
[2025-10-18 05:36:45] 2025-10-18 04:35:57,822 | INFO     | 
[2025-10-18 05:36:45] 2025-10-18 04:35:57,840 | INFO     | architecture information:
[2025-10-18 05:36:45] 2025-10-18 04:35:57,841 | INFO     | executing command: cat /etc/os-release
[2025-10-18 05:36:45] 2025-10-18 04:35:57,848 | INFO     | cat /etc/os-release:
[2025-10-18 05:36:45] NAME="CentOS Linux"
[2025-10-18 05:36:45] VERSION="7 (Core)"
[2025-10-18 05:36:45] ID="centos"
[2025-10-18 05:36:45] ID_LIKE="rhel fedora"
[2025-10-18 05:36:45] VERSION_ID="7"
[2025-10-18 05:36:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 05:36:45] ANSI_COLOR="0;31"
[2025-10-18 05:36:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 05:36:45] HOME_URL="https://www.centos.org/"
[2025-10-18 05:36:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 05:36:45] 
[2025-10-18 05:36:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 05:36:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 05:36:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 05:36:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 05:36:45] 
[2025-10-18 05:36:45] 2025-10-18 04:35:57,849 | INFO     | ***************************************
[2025-10-18 05:36:45] 2025-10-18 04:35:58,352 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-18 05:36:45] 2025-10-18 04:35:58,363 | INFO     | sufficient remaining disk space (428025577472 B)
[2025-10-18 05:36:45] 2025-10-18 04:35:58,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 05:36:45] 2025-10-18 04:35:58,364 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 05:36:45] 2025-10-18 04:35:58,364 | INFO     | update_server=False
[2025-10-18 05:36:45] 2025-10-18 04:35:58,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 05:36:45] 2025-10-18 04:35:58,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:36:45] 2025-10-18 04:35:58,364 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:36:45] 2025-10-18 04:35:58,365 | INFO     | aborting loop
[2025-10-18 05:36:45] 2025-10-18 04:35:58,508 | INFO     | all data control threads have been joined
[2025-10-18 05:36:45] 2025-10-18 04:35:59,012 | INFO     | all payload control threads have been joined
[2025-10-18 05:36:45] 2025-10-18 04:35:59,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 05:36:45] 2025-10-18 04:35:59,367 | INFO     | [job] retrieve thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:35:59,368 | INFO     | [job] job monitor thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:35:59,370 | INFO     | [job] queue monitor thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:35:59,388 | INFO     | all job control threads have been joined
[2025-10-18 05:36:45] 2025-10-18 04:35:59,514 | INFO     | [data] control thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:35:59,769 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:35:59,821 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:35:59,909 | INFO     | [payload] validate_post thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:35:59,921 | INFO     | [job] validate thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:36:00,016 | INFO     | [payload] control thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:36:00,116 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:36:00,117 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:36:00,394 | INFO     | [job] control thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:36:00,711 | INFO     | [payload] failed_post thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:36:00,816 | INFO     | [data] copytool_in thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:36:01,257 | INFO     | [data] copytool_out thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:36:01,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 05:36:45] 2025-10-18 04:36:05,596 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 05:36:45] 2025-10-18 04:36:29,472 | INFO     | PID=7579 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 05:36:45] 2025-10-18 04:36:29,472 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 05:36:45] 2025-10-18 04:36:29,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 05:36:45] 2025-10-18 04:36:29,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 05:36:45] 2025-10-18 04:36:39,525 | INFO     | [monitor] cgroup control has ended
[2025-10-18 05:36:45] 2025-10-18 04:36:40,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493349021504)>', '<ExcThread(monitor, started 140493027514112)>']
[2025-10-18 05:36:45] 2025-10-18 04:36:40,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 05:36:45] 2025-10-18 04:36:40,531 | INFO     | [monitor] control thread has ended
[2025-10-18 05:36:45] 2025-10-18 04:36:45,086 | INFO     | all workflow threads have been joined
[2025-10-18 05:36:45] 2025-10-18 04:36:45,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 05:36:45] 2025-10-18 04:36:45,088 | INFO     | traces error code: 0
[2025-10-18 05:36:45] 2025-10-18 04:36:45,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 05:36:45] 2025-10-18 04:36:45,227 [wrapper] ==== pilot stdout END ====
[2025-10-18 05:36:45] 2025-10-18 04:36:45,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 05:36:45] 2025-10-18 04:36:45,232 [wrapper] pilotpid: 7579
[2025-10-18 05:36:45] 2025-10-18 04:36:45,235 [wrapper] Pilot exit status: 0
[2025-10-18 05:36:45] 2025-10-18 04:36:45,301 [wrapper] pandaids: 6846773632
[2025-10-18 05:36:45] 2025-10-18 04:36:45,339 [wrapper] cleanup supervisor_pilot   33004 7580
[2025-10-18 05:36:45] 2025-10-18 04:36:45,341 [wrapper] Test setup, not cleaning
[2025-10-18 05:36:45] 2025-10-18 04:36:45,344 [wrapper] apfmon messages muted
[2025-10-18 05:36:45] 2025-10-18 04:36:45,346 [wrapper] ==== wrapper stdout END ====
[2025-10-18 05:36:45] 2025-10-18 04:36:45,348 [wrapper] ==== wrapper stderr END ====
[2025-10-18 05:36:45]  *** Error codes and diagnostics ***
[2025-10-18 05:36:45]     "exeErrorCode": 0,
[2025-10-18 05:36:45]     "exeErrorDiag": "",
[2025-10-18 05:36:45]     "pilotErrorCode": 0,
[2025-10-18 05:36:45]     "pilotErrorDiag": "",
[2025-10-18 05:36:45]  *** Listing of results directory ***
[2025-10-18 05:36:45] total 433284
[2025-10-18 05:36:45] -rw-r--r-- 1 m m    557409 Oct 16 00:33 pilot3.tar.gz
[2025-10-18 05:36:45] -rw-r--r-- 1 m m      5112 Oct 16 01:05 queuedata.json
[2025-10-18 05:36:45] -rwx------ 1 m m     36292 Oct 16 01:06 runpilot2-wrapper.sh
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m       100 Oct 18 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 05:36:45] -rwxr-xr-x 1 m m      7986 Oct 18 02:35 run_atlas
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m       105 Oct 18 02:35 job.xml
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m      5963 Oct 18 02:35 init_data.xml
[2025-10-18 05:36:45] -rw-r--r-- 2 m m 228329736 Oct 18 02:35 EVNT.46771634._000249.pool.root.1
[2025-10-18 05:36:45] drwxrwx--x 2 m m      4096 Oct 18 02:35 shared
[2025-10-18 05:36:45] -rw-r--r-- 2 m m    569676 Oct 18 02:35 input.tar.gz
[2025-10-18 05:36:45] -rw-r--r-- 2 m m     15120 Oct 18 02:35 start_atlas.sh
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m         0 Oct 18 02:35 boinc_lockfile
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m      2553 Oct 18 02:35 pandaJob.out
[2025-10-18 05:36:45] -rw------- 1 m m    976749 Oct 18 02:36 agis_schedconf.cvmfs.json
[2025-10-18 05:36:45] -rw------- 1 m m   1560740 Oct 18 02:37 agis_ddmendpoints.agis.ALL.json
[2025-10-18 05:36:45] drwx------ 5 m m      4096 Oct 18 02:37 pilot3
[2025-10-18 05:36:45] -rw------- 1 m m 207739157 Oct 18 05:34 HITS.46771637._003696.pool.root.1
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m       530 Oct 18 05:34 boinc_task_state.xml
[2025-10-18 05:36:45] -rw------- 1 m m      1013 Oct 18 05:34 memory_monitor_summary.json
[2025-10-18 05:36:45] -rw------- 1 m m    355950 Oct 18 05:34 log.46771637._003696.job.log.tgz.1
[2025-10-18 05:36:45] -rw------- 1 m m      7759 Oct 18 05:35 heartbeat.json
[2025-10-18 05:36:45] -rw------- 1 m m        95 Oct 18 05:35 pilot_heartbeat.json
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m        28 Oct 18 05:36 wrapper_checkpoint.txt
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m      8192 Oct 18 05:36 boinc_mmap_file
[2025-10-18 05:36:45] -rw------- 1 m m      4745 Oct 18 05:36 pilotlog.txt
[2025-10-18 05:36:45] -rw------- 1 m m   1495397 Oct 18 05:36 log.46771637._003696.job.log.1
[2025-10-18 05:36:45] -rw------- 1 m m       357 Oct 18 05:36 output.list
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m       620 Oct 18 05:36 runtime_log
[2025-10-18 05:36:45] -rw------- 1 m m   1873920 Oct 18 05:36 result.tar.gz
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m      8618 Oct 18 05:36 runtime_log.err
[2025-10-18 05:36:45] -rw------- 1 m m       639 Oct 18 05:36 jxbLDmNhQT8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2yWMDm5lMs0m.diag
[2025-10-18 05:36:45] -rw-rw-r-- 1 m m     20942 Oct 18 05:36 stderr.txt
[2025-10-18 05:36:45] HITS file was successfully produced:
[2025-10-18 05:36:45] -rw------- 1 m m 207739157 Oct 18 05:34 shared/HITS.pool.root.1
[2025-10-18 05:36:45]  *** Contents of shared directory: ***
[2025-10-18 05:36:45] total 428268
[2025-10-18 05:36:45] -rw-r--r-- 2 m m 228329736 Oct 18 02:35 ATLAS.root_0
[2025-10-18 05:36:45] -rw-r--r-- 2 m m    569676 Oct 18 02:35 input.tar.gz
[2025-10-18 05:36:45] -rw-r--r-- 2 m m     15120 Oct 18 02:35 start_atlas.sh
[2025-10-18 05:36:45] -rw------- 1 m m 207739157 Oct 18 05:34 HITS.pool.root.1
[2025-10-18 05:36:45] -rw------- 1 m m   1873920 Oct 18 05:36 result.tar.gz
05:36:47 (3277): run_atlas exited; CPU time 40902.142965
05:36:47 (3277): called boinc_finish(0)

</stderr_txt>
]]>

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