Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:09:01 (3441): wrapper (7.7.26015): starting
02:09:01 (3441): wrapper: running run_atlas (--nthreads 4)
[2025-10-16 02:09:01] Arguments: --nthreads 4
[2025-10-16 02:09:01] Threads: 4
[2025-10-16 02:09:01] Checking for CVMFS
[2025-10-16 02:09:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 02:09:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 02:09:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 02:09:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 02:09:15] 2.11.5.0 3662 0 25388 151753 3 1 2286821 4194305 0 130560 0 0 0.000 1291 213 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-16 02:09:15] CVMFS is ok
[2025-10-16 02:09:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 02:09:15] Checking for apptainer binary...
[2025-10-16 02:09:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 02:09:15] Running /usr/bin/apptainer --version
[2025-10-16 02:09:16] apptainer version 1.0.3
[2025-10-16 02:09:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 02:09:17] TeeC26
[2025-10-16 02:09:17] apptainer works
[2025-10-16 02:09:17] Set ATHENA_PROC_NUMBER=4
[2025-10-16 02:09:17] Set ATHENA_CORE_NUMBER=4
[2025-10-16 02:09:17] Starting ATLAS job with PandaID=6846773700
[2025-10-16 02:09:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 05:18:44]  *** The last 200 lines of the pilot log: ***
[2025-10-16 05:18:44] 2025-10-16 04:18:07,991 | INFO     | mean y: 2495015.949438202
[2025-10-16 05:18:44] 2025-10-16 04:18:07,991 | INFO     | -- intersect: -45626014465.38023
[2025-10-16 05:18:44] 2025-10-16 04:18:07,991 | INFO     | intersect: -45626014465.38023
[2025-10-16 05:18:44] 2025-10-16 04:18:07,991 | INFO     | chi2: 1.9892591164821274
[2025-10-16 05:18:44] 2025-10-16 04:18:07,991 | INFO     | sum of square deviations: 1605470102.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,992 | INFO     | sum of deviations: 43927103084.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,992 | INFO     | mean x: 1760582288.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,992 | INFO     | mean y: 2493531.2716763006
[2025-10-16 05:18:44] 2025-10-16 04:18:07,992 | INFO     | -- intersect: -48168618192.63919
[2025-10-16 05:18:44] 2025-10-16 04:18:07,992 | INFO     | intersect: -48168618192.63919
[2025-10-16 05:18:44] 2025-10-16 04:18:07,992 | INFO     | chi2: 1.9897596608300603
[2025-10-16 05:18:44] 2025-10-16 04:18:07,992 | INFO     | current chi2=1.9897596608300603 (change=-0.025162350333629527 %)
[2025-10-16 05:18:44] 2025-10-16 04:18:07,992 | INFO     | right removable region: 172
[2025-10-16 05:18:44] 2025-10-16 04:18:07,992 | INFO     | sum of square deviations: 1605470102.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,993 | INFO     | sum of deviations: 6440576298.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,993 | INFO     | mean x: 1760582593.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,993 | INFO     | mean y: 2536194.49132948
[2025-10-16 05:18:44] 2025-10-16 04:18:07,993 | INFO     | -- intersect: -7060296370.887195
[2025-10-16 05:18:44] 2025-10-16 04:18:07,993 | INFO     | intersect: -7060296370.887195
[2025-10-16 05:18:44] 2025-10-16 04:18:07,993 | INFO     | chi2: 0.00894950964587848
[2025-10-16 05:18:44] 2025-10-16 04:18:07,993 | INFO     | current chi2=0.00894950964587848 (change=99.55010840107622 %)
[2025-10-16 05:18:44] 2025-10-16 04:18:07,993 | INFO     | sum of square deviations: 1470248962.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,994 | INFO     | sum of deviations: 3998406253.5000005
[2025-10-16 05:18:44] 2025-10-16 04:18:07,994 | INFO     | mean x: 1760582745.5
[2025-10-16 05:18:44] 2025-10-16 04:18:07,994 | INFO     | mean y: 2538922.148809524
[2025-10-16 05:18:44] 2025-10-16 04:18:07,994 | INFO     | -- intersect: -4785442733.580731
[2025-10-16 05:18:44] 2025-10-16 04:18:07,994 | INFO     | intersect: -4785442733.580731
[2025-10-16 05:18:44] 2025-10-16 04:18:07,994 | INFO     | chi2: 0.0008283720065117259
[2025-10-16 05:18:44] 2025-10-16 04:18:07,994 | INFO     | current chi2=0.0008283720065117259 (change=90.74393973201408 %)
[2025-10-16 05:18:44] 2025-10-16 04:18:07,994 | INFO     | sum of square deviations: 1342841922.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,995 | INFO     | sum of deviations: 3108458313.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,995 | INFO     | mean x: 1760582898.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,995 | INFO     | mean y: 2539985.5398773006
[2025-10-16 05:18:44] 2025-10-16 04:18:07,995 | INFO     | -- intersect: -4072920018.6151996
[2025-10-16 05:18:44] 2025-10-16 04:18:07,995 | INFO     | intersect: -4072920018.6151996
[2025-10-16 05:18:44] 2025-10-16 04:18:07,995 | INFO     | chi2: 0.0004185342728339997
[2025-10-16 05:18:44] 2025-10-16 04:18:07,995 | INFO     | current chi2=0.0004185342728339997 (change=49.47508250593265 %)
[2025-10-16 05:18:44] 2025-10-16 04:18:07,995 | INFO     | sum of square deviations: 1223016419.5
[2025-10-16 05:18:44] 2025-10-16 04:18:07,996 | INFO     | sum of deviations: 2568965681.4999995
[2025-10-16 05:18:44] 2025-10-16 04:18:07,996 | INFO     | mean x: 1760583050.5
[2025-10-16 05:18:44] 2025-10-16 04:18:07,996 | INFO     | mean y: 2540671.588607595
[2025-10-16 05:18:44] 2025-10-16 04:18:07,996 | INFO     | -- intersect: -3695592373.930231
[2025-10-16 05:18:44] 2025-10-16 04:18:07,996 | INFO     | intersect: -3695592373.930231
[2025-10-16 05:18:44] 2025-10-16 04:18:07,996 | INFO     | chi2: 0.00031936920023788526
[2025-10-16 05:18:44] 2025-10-16 04:18:07,996 | INFO     | current chi2=0.00031936920023788526 (change=23.69341748876217 %)
[2025-10-16 05:18:44] 2025-10-16 04:18:07,996 | INFO     | left removable region: 40
[2025-10-16 05:18:44] 2025-10-16 04:18:07,996 | INFO     | sum of square deviations: 713140813.0
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | sum of deviations: 1085524645.9999998
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | mean x: 1760583477.5
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | mean y: 2542529.5303030303
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | -- intersect: -2677372462.470914
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | intersect: -2677372462.470914
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | chi2: 5.925336328439659e-05
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | -- intersect: -2677372462.470914
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | current memory leak: 1.52 B/s (using 132 data points, chi2=0.00)
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | could have reported an average CPU frequency of 3200 MHz (9 samples)
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | ..............................
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | . Timing measurements:
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | . get job = 0 s
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | . initial setup = 15 s
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | . payload setup = 5 s
[2025-10-16 05:18:44] 2025-10-16 04:18:07,997 | INFO     | . stage-in = 0 s
[2025-10-16 05:18:44] 2025-10-16 04:18:07,998 | INFO     | . payload execution = 10851 s
[2025-10-16 05:18:44] 2025-10-16 04:18:07,998 | INFO     | . stage-out = 185 s
[2025-10-16 05:18:44] 2025-10-16 04:18:07,998 | INFO     | . log creation = 0 s
[2025-10-16 05:18:44] 2025-10-16 04:18:07,998 | INFO     | ..............................
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | 
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | job summary report
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | --------------------------------------------------
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | PanDA job id: 6846773700
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | task id: 46771637
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | errors: (none)
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | pilot state: finished 
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | transexitcode: 0
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | exeerrorcode: 0
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | exeerrordiag: 
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | exitcode: 0
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | exitmsg: OK
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | cpuconsumptiontime: 41680 s
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | nevents: 400
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | neventsw: 0
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | pid: 14127
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | pgrp: 14127
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | corecount: 4
[2025-10-16 05:18:44] 2025-10-16 04:18:08,039 | INFO     | event service: False
[2025-10-16 05:18:44] 2025-10-16 04:18:08,040 | INFO     | sizes: {0: 2348921, 2: 2349183, 11: 2349211, 10860: 2377820, 11047: 2385326, 11254: 2385528}
[2025-10-16 05:18:44] 2025-10-16 04:18:08,040 | INFO     | --------------------------------------------------
[2025-10-16 05:18:44] 2025-10-16 04:18:08,040 | INFO     | 
[2025-10-16 05:18:44] 2025-10-16 04:18:08,040 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-16 05:18:44] 2025-10-16 04:18:08,048 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,048 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,048 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 05:18:44] 2025-10-16 04:18:08,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,050 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 05:18:44] 2025-10-16 04:18:08,050 | INFO     | job 6846773700 has completed (purged errors)
[2025-10-16 05:18:44] 2025-10-16 04:18:08,050 | INFO     | overall cleanup function is called
[2025-10-16 05:18:44] 2025-10-16 04:18:09,056 | INFO     | --- collectZombieJob: --- 10, [14127]
[2025-10-16 05:18:44] 2025-10-16 04:18:09,057 | INFO     | zombie collector waiting for pid 14127
[2025-10-16 05:18:44] 2025-10-16 04:18:09,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 05:18:44] 2025-10-16 04:18:09,057 | INFO     | collected zombie processes
[2025-10-16 05:18:44] 2025-10-16 04:18:09,057 | INFO     | will attempt to kill all subprocesses of pid=14127
[2025-10-16 05:18:44] 2025-10-16 04:18:09,116 | INFO     | process IDs to be killed: [14127] (in reverse order)
[2025-10-16 05:18:44] 2025-10-16 04:18:09,140 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 05:18:44] 2025-10-16 04:18:09,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 05:18:44] 2025-10-16 04:18:09,143 | INFO     | did not find any defunct processes belonging to 14127
[2025-10-16 05:18:44] 2025-10-16 04:18:09,144 | INFO     | did not find any defunct processes belonging to 14127
[2025-10-16 05:18:44] 2025-10-16 04:18:09,145 | INFO     | ready for new job
[2025-10-16 05:18:44] 2025-10-16 04:18:09,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 05:18:44] 2025-10-16 04:18:09,146 | INFO     | ***************************************
[2025-10-16 05:18:44] 2025-10-16 04:18:09,146 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 05:18:44] 2025-10-16 04:18:09,146 | INFO     | ***************************************
[2025-10-16 05:18:44] 2025-10-16 04:18:09,146 | INFO     | 
[2025-10-16 05:18:44] 2025-10-16 04:18:09,164 | INFO     | architecture information:
[2025-10-16 05:18:44] 2025-10-16 04:18:09,165 | INFO     | executing command: cat /etc/os-release
[2025-10-16 05:18:44] 2025-10-16 04:18:09,171 | INFO     | cat /etc/os-release:
[2025-10-16 05:18:44] NAME="CentOS Linux"
[2025-10-16 05:18:44] VERSION="7 (Core)"
[2025-10-16 05:18:44] ID="centos"
[2025-10-16 05:18:44] ID_LIKE="rhel fedora"
[2025-10-16 05:18:44] VERSION_ID="7"
[2025-10-16 05:18:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 05:18:44] ANSI_COLOR="0;31"
[2025-10-16 05:18:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 05:18:44] HOME_URL="https://www.centos.org/"
[2025-10-16 05:18:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 05:18:44] 
[2025-10-16 05:18:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 05:18:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 05:18:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 05:18:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 05:18:44] 
[2025-10-16 05:18:44] 2025-10-16 04:18:09,171 | INFO     | ***************************************
[2025-10-16 05:18:44] 2025-10-16 04:18:09,675 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-16 05:18:44] 2025-10-16 04:18:09,685 | INFO     | sufficient remaining disk space (432713760768 B)
[2025-10-16 05:18:44] 2025-10-16 04:18:09,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 05:18:44] 2025-10-16 04:18:09,686 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 05:18:44] 2025-10-16 04:18:09,686 | INFO     | update_server=False
[2025-10-16 05:18:44] 2025-10-16 04:18:09,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 05:18:44] 2025-10-16 04:18:09,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 05:18:44] 2025-10-16 04:18:09,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 05:18:44] 2025-10-16 04:18:09,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 05:18:44] 2025-10-16 04:18:09,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 05:18:44] 2025-10-16 04:18:09,687 | INFO     | aborting loop
[2025-10-16 05:18:44] 2025-10-16 04:18:10,117 | INFO     | all data control threads have been joined
[2025-10-16 05:18:44] 2025-10-16 04:18:10,379 | INFO     | all payload control threads have been joined
[2025-10-16 05:18:44] 2025-10-16 04:18:10,688 | INFO     | [job] retrieve thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:10,692 | INFO     | [job] job monitor thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:10,693 | INFO     | [job] queue monitor thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:10,736 | INFO     | all job control threads have been joined
[2025-10-16 05:18:44] 2025-10-16 04:18:10,813 | INFO     | [data] copytool_in thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:10,816 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:11,093 | INFO     | [payload] validate_post thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:11,123 | INFO     | [data] control thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:11,329 | INFO     | [job] validate thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:11,385 | INFO     | [payload] control thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:11,472 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:11,477 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:11,693 | INFO     | [data] copytool_out thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:11,742 | INFO     | [job] control thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:11,752 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:11,766 | INFO     | [payload] failed_post thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:13,695 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 05:18:44] 2025-10-16 04:18:38,568 | INFO     | [monitor] cgroup control has ended
[2025-10-16 05:18:44] 2025-10-16 04:18:39,396 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974668801856)>', '<ExcThread(monitor, started 139974225671936)>']
[2025-10-16 05:18:44] 2025-10-16 04:18:40,301 | INFO     | PID=7757 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-16 05:18:44] 2025-10-16 04:18:40,301 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 05:18:44] 2025-10-16 04:18:40,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 05:18:44] 2025-10-16 04:18:40,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 05:18:44] 2025-10-16 04:18:40,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 05:18:44] 2025-10-16 04:18:40,301 | INFO     | [monitor] control thread has ended
[2025-10-16 05:18:44] 2025-10-16 04:18:44,416 | INFO     | all workflow threads have been joined
[2025-10-16 05:18:44] 2025-10-16 04:18:44,417 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 05:18:44] 2025-10-16 04:18:44,418 | INFO     | traces error code: 0
[2025-10-16 05:18:44] 2025-10-16 04:18:44,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 05:18:44] 2025-10-16 04:18:44,511 [wrapper] ==== pilot stdout END ====
[2025-10-16 05:18:44] 2025-10-16 04:18:44,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 05:18:44] 2025-10-16 04:18:44,515 [wrapper] pilotpid: 7757
[2025-10-16 05:18:44] 2025-10-16 04:18:44,516 [wrapper] Pilot exit status: 0
[2025-10-16 05:18:44] 2025-10-16 04:18:44,530 [wrapper] pandaids: 6846773700
[2025-10-16 05:18:44] 2025-10-16 04:18:44,544 [wrapper] cleanup supervisor_pilot  1182 7758
[2025-10-16 05:18:44] 2025-10-16 04:18:44,546 [wrapper] Test setup, not cleaning
[2025-10-16 05:18:44] 2025-10-16 04:18:44,548 [wrapper] apfmon messages muted
[2025-10-16 05:18:44] 2025-10-16 04:18:44,550 [wrapper] ==== wrapper stdout END ====
[2025-10-16 05:18:44] 2025-10-16 04:18:44,551 [wrapper] ==== wrapper stderr END ====
[2025-10-16 05:18:44]  *** Error codes and diagnostics ***
[2025-10-16 05:18:44]     "exeErrorCode": 0,
[2025-10-16 05:18:44]     "exeErrorDiag": "",
[2025-10-16 05:18:44]     "pilotErrorCode": 0,
[2025-10-16 05:18:44]     "pilotErrorDiag": "",
[2025-10-16 05:18:44]  *** Listing of results directory ***
[2025-10-16 05:18:44] total 438944
[2025-10-16 05:18:44] -rw-r--r-- 1 m m    557409 Oct 16 00:33 pilot3.tar.gz
[2025-10-16 05:18:44] -rw-r--r-- 1 m m      5112 Oct 16 01:03 queuedata.json
[2025-10-16 05:18:44] -rwx------ 1 m m     36292 Oct 16 01:04 runpilot2-wrapper.sh
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m       100 Oct 16 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 05:18:44] -rwxr-xr-x 1 m m      7986 Oct 16 02:09 run_atlas
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m       105 Oct 16 02:09 job.xml
[2025-10-16 05:18:44] -rw-r--r-- 2 m m     15120 Oct 16 02:09 start_atlas.sh
[2025-10-16 05:18:44] drwxrwx--x 2 m m      4096 Oct 16 02:09 shared
[2025-10-16 05:18:44] -rw-r--r-- 2 m m    569675 Oct 16 02:09 input.tar.gz
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m      5964 Oct 16 02:09 init_data.xml
[2025-10-16 05:18:44] -rw-r--r-- 2 m m 232760662 Oct 16 02:09 EVNT.46771634._000252.pool.root.1
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m         0 Oct 16 02:09 boinc_lockfile
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m      2554 Oct 16 02:09 pandaJob.out
[2025-10-16 05:18:44] -rw------- 1 m m    974310 Oct 16 02:10 agis_schedconf.cvmfs.json
[2025-10-16 05:18:44] drwx------ 5 m m      4096 Oct 16 02:10 pilot3
[2025-10-16 05:18:44] -rw------- 1 m m 210631896 Oct 16 05:11 HITS.46771637._003764.pool.root.1
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m       530 Oct 16 05:11 boinc_task_state.xml
[2025-10-16 05:18:44] -rw------- 1 m m      1030 Oct 16 05:11 memory_monitor_summary.json
[2025-10-16 05:18:44] -rw------- 1 m m         0 Oct 16 05:12 agis_ddmendpoints.agis.ALL.json
[2025-10-16 05:18:44] -rw------- 1 m m    346032 Oct 16 05:13 log.46771637._003764.job.log.tgz.1
[2025-10-16 05:18:44] -rw------- 1 m m      7784 Oct 16 05:18 heartbeat.json
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m      8192 Oct 16 05:18 boinc_mmap_file
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m        28 Oct 16 05:18 wrapper_checkpoint.txt
[2025-10-16 05:18:44] -rw------- 1 m m        95 Oct 16 05:18 pilot_heartbeat.json
[2025-10-16 05:18:44] -rw------- 1 m m      4745 Oct 16 05:18 pilotlog.txt
[2025-10-16 05:18:44] -rw------- 1 m m   1528891 Oct 16 05:18 log.46771637._003764.job.log.1
[2025-10-16 05:18:44] -rw------- 1 m m       357 Oct 16 05:18 output.list
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m       620 Oct 16 05:18 runtime_log
[2025-10-16 05:18:44] -rw------- 1 m m   1894400 Oct 16 05:18 result.tar.gz
[2025-10-16 05:18:44] -rw------- 1 m m       645 Oct 16 05:18 WiGODmCfQT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSVoNDmWvt2qn.diag
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m      8618 Oct 16 05:18 runtime_log.err
[2025-10-16 05:18:44] -rw-rw-r-- 1 m m     20508 Oct 16 05:18 stderr.txt
[2025-10-16 05:18:44] HITS file was successfully produced:
[2025-10-16 05:18:44] -rw------- 1 m m 210631896 Oct 16 05:11 shared/HITS.pool.root.1
[2025-10-16 05:18:44]  *** Contents of shared directory: ***
[2025-10-16 05:18:44] total 435436
[2025-10-16 05:18:44] -rw-r--r-- 2 m m     15120 Oct 16 02:09 start_atlas.sh
[2025-10-16 05:18:44] -rw-r--r-- 2 m m    569675 Oct 16 02:09 input.tar.gz
[2025-10-16 05:18:44] -rw-r--r-- 2 m m 232760662 Oct 16 02:09 ATLAS.root_0
[2025-10-16 05:18:44] -rw------- 1 m m 210631896 Oct 16 05:11 HITS.pool.root.1
[2025-10-16 05:18:44] -rw------- 1 m m   1894400 Oct 16 05:18 result.tar.gz
05:18:46 (3441): run_atlas exited; CPU time 41766.373767
05:18:46 (3441): called boinc_finish(0)

</stderr_txt>
]]>

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