Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:53:54 (4058): wrapper (7.7.26015): starting
01:53:54 (4058): wrapper: running run_atlas (--nthreads 4)
[2025-10-16 01:53:54] Arguments: --nthreads 4
[2025-10-16 01:53:54] Threads: 4
[2025-10-16 01:53:54] Checking for CVMFS
[2025-10-16 01:54:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 01:54:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 01:54:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 01:54:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 01:54:22] 2.11.5.0 4280 0 25148 151753 3 1 3449111 4194305 0 130560 0 0 0.000 1291 385 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-16 01:54:22] CVMFS is ok
[2025-10-16 01:54:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 01:54:22] Checking for apptainer binary...
[2025-10-16 01:54:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 01:54:22] Running /usr/bin/apptainer --version
[2025-10-16 01:54:23] apptainer version 1.0.3
[2025-10-16 01:54:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 01:54:30] TeeC24
[2025-10-16 01:54:30] apptainer works
[2025-10-16 01:54:30] Set ATHENA_PROC_NUMBER=4
[2025-10-16 01:54:30] Set ATHENA_CORE_NUMBER=4
[2025-10-16 01:54:30] Starting ATLAS job with PandaID=6846773216
[2025-10-16 01:54:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 05:17:56]  *** The last 200 lines of the pilot log: ***
[2025-10-16 05:17:57] 2025-10-16 04:17:23,588 | INFO     | time since job start (12132s) is within the limit (172800.0s)
[2025-10-16 05:17:57] 2025-10-16 04:17:23,705 | INFO     | monitor loop #894: job 0:6846773216 is in state 'finished'
[2025-10-16 05:17:57] 2025-10-16 04:17:23,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 05:17:57] 2025-10-16 04:17:24,662 | INFO     | PID=8370 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-16 05:17:57] 2025-10-16 04:17:24,870 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-16 05:17:57] 2025-10-16 04:17:24,871 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 2779.2085
[2025-10-16 05:17:57] 2025-10-16 04:17:24,871 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6846773216/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 05:17:57] 2025-10-16 04:17:24,872 | INFO     | extracted standard info from prmon json
[2025-10-16 05:17:57] 2025-10-16 04:17:24,872 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 05:17:57] 2025-10-16 04:17:24,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 05:17:57] 2025-10-16 04:17:24,872 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 05:17:57] 2025-10-16 04:17:24,872 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 05:17:57] 2025-10-16 04:17:24,874 | INFO     | fitting pss+swap vs Time
[2025-10-16 05:17:57] 2025-10-16 04:17:24,875 | INFO     | sum of square deviations: 2334722845.0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,875 | INFO     | sum of deviations: 10556556177.999994
[2025-10-16 05:17:57] 2025-10-16 04:17:24,875 | INFO     | mean x: 1760582080.5
[2025-10-16 05:17:57] 2025-10-16 04:17:24,875 | INFO     | mean y: 2361410.8673469387
[2025-10-16 05:17:57] 2025-10-16 04:17:24,875 | INFO     | -- intersect: -7958191028.400175
[2025-10-16 05:17:57] 2025-10-16 04:17:24,875 | INFO     | intersect: -7958191028.400175
[2025-10-16 05:17:57] 2025-10-16 04:17:24,876 | INFO     | chi2: 2.0180120358538023
[2025-10-16 05:17:57] 2025-10-16 04:17:24,876 | INFO     | sum of square deviations: 2160561440.0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,876 | INFO     | sum of deviations: 10177390060.000002
[2025-10-16 05:17:57] 2025-10-16 04:17:24,876 | INFO     | mean x: 1760581928.0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,877 | INFO     | mean y: 2361078.7486910997
[2025-10-16 05:17:57] 2025-10-16 04:17:24,877 | INFO     | -- intersect: -8290913383.209141
[2025-10-16 05:17:57] 2025-10-16 04:17:24,877 | INFO     | intersect: -8290913383.209141
[2025-10-16 05:17:57] 2025-10-16 04:17:24,877 | INFO     | chi2: 2.0190318111111374
[2025-10-16 05:17:57] 2025-10-16 04:17:24,877 | INFO     | current chi2=2.0190318111111374 (change=-0.0505336558562021 %)
[2025-10-16 05:17:57] 2025-10-16 04:17:24,877 | INFO     | right removable region: 190
[2025-10-16 05:17:57] 2025-10-16 04:17:24,877 | INFO     | sum of square deviations: 2160561440.0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,878 | INFO     | sum of deviations: -23013144565.0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,878 | INFO     | mean x: 1760582233.0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,878 | INFO     | mean y: 2390554.3036649213
[2025-10-16 05:17:57] 2025-10-16 04:17:24,878 | INFO     | -- intersect: 18755170594.01386
[2025-10-16 05:17:57] 2025-10-16 04:17:24,878 | INFO     | intersect: 18755170594.01386
[2025-10-16 05:17:57] 2025-10-16 04:17:24,878 | INFO     | chi2: 0.28984538526581455
[2025-10-16 05:17:57] 2025-10-16 04:17:24,878 | INFO     | current chi2=0.28984538526581455 (change=85.63708342090321 %)
[2025-10-16 05:17:57] 2025-10-16 04:17:24,878 | INFO     | sum of square deviations: 1995283922.5
[2025-10-16 05:17:57] 2025-10-16 04:17:24,879 | INFO     | sum of deviations: -13753084064.499996
[2025-10-16 05:17:57] 2025-10-16 04:17:24,879 | INFO     | mean x: 1760582385.5
[2025-10-16 05:17:57] 2025-10-16 04:17:24,879 | INFO     | mean y: 2381988.4139784947
[2025-10-16 05:17:57] 2025-10-16 04:17:24,879 | INFO     | -- intersect: 12137716352.217754
[2025-10-16 05:17:57] 2025-10-16 04:17:24,879 | INFO     | intersect: 12137716352.217754
[2025-10-16 05:17:57] 2025-10-16 04:17:24,879 | INFO     | chi2: 0.22866953416250443
[2025-10-16 05:17:57] 2025-10-16 04:17:24,879 | INFO     | current chi2=0.22866953416250443 (change=21.106374023242186 %)
[2025-10-16 05:17:57] 2025-10-16 04:17:24,880 | INFO     | left removable region: 20
[2025-10-16 05:17:57] 2025-10-16 04:17:24,880 | INFO     | sum of square deviations: 1523386702.5
[2025-10-16 05:17:57] 2025-10-16 04:17:24,880 | INFO     | sum of deviations: 5400546885.500001
[2025-10-16 05:17:57] 2025-10-16 04:17:24,880 | INFO     | mean x: 1760582507.5
[2025-10-16 05:17:57] 2025-10-16 04:17:24,880 | INFO     | mean y: 2362128.970588235
[2025-10-16 05:17:57] 2025-10-16 04:17:24,880 | INFO     | -- intersect: -6239065843.284477
[2025-10-16 05:17:57] 2025-10-16 04:17:24,880 | INFO     | intersect: -6239065843.284477
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | chi2: 0.00027106811403446954
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | -- intersect: -6239065843.284477
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | current memory leak: 3.55 B/s (using 170 data points, chi2=0.00)
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | could have reported an average CPU frequency of 3200 MHz (10 samples)
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | ..............................
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | . Timing measurements:
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | . get job = 0 s
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | . initial setup = 20 s
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | . payload setup = 6 s
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | . stage-in = 0 s
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | . payload execution = 11927 s
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | . stage-out = 180 s
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | . log creation = 0 s
[2025-10-16 05:17:57] 2025-10-16 04:17:24,881 | INFO     | ..............................
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | 
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | job summary report
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | --------------------------------------------------
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | PanDA job id: 6846773216
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | task id: 46771637
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | errors: (none)
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | pilot state: finished 
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | transexitcode: 0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | exeerrorcode: 0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | exeerrordiag: 
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | exitcode: 0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | exitmsg: OK
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | cpuconsumptiontime: 45954 s
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | nevents: 400
[2025-10-16 05:17:57] 2025-10-16 04:17:24,955 | INFO     | neventsw: 0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,956 | INFO     | pid: 14745
[2025-10-16 05:17:57] 2025-10-16 04:17:24,956 | INFO     | pgrp: 14745
[2025-10-16 05:17:57] 2025-10-16 04:17:24,956 | INFO     | corecount: 4
[2025-10-16 05:17:57] 2025-10-16 04:17:24,956 | INFO     | event service: False
[2025-10-16 05:17:57] 2025-10-16 04:17:24,956 | INFO     | sizes: {0: 2348918, 2: 2349180, 10: 2349208, 11937: 2378543, 12117: 2385993, 12119: 2386049, 12121: 2386201}
[2025-10-16 05:17:57] 2025-10-16 04:17:24,956 | INFO     | --------------------------------------------------
[2025-10-16 05:17:57] 2025-10-16 04:17:24,956 | INFO     | 
[2025-10-16 05:17:57] 2025-10-16 04:17:24,956 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-16 05:17:57] 2025-10-16 04:17:24,965 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,965 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,966 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,967 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 05:17:57] 2025-10-16 04:17:24,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 05:17:57] 2025-10-16 04:17:24,967 | INFO     | job 6846773216 has completed (purged errors)
[2025-10-16 05:17:57] 2025-10-16 04:17:24,967 | INFO     | overall cleanup function is called
[2025-10-16 05:17:57] 2025-10-16 04:17:25,973 | INFO     | --- collectZombieJob: --- 10, [14745]
[2025-10-16 05:17:57] 2025-10-16 04:17:25,974 | INFO     | zombie collector waiting for pid 14745
[2025-10-16 05:17:57] 2025-10-16 04:17:25,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 05:17:57] 2025-10-16 04:17:25,974 | INFO     | collected zombie processes
[2025-10-16 05:17:57] 2025-10-16 04:17:25,974 | INFO     | will attempt to kill all subprocesses of pid=14745
[2025-10-16 05:17:57] 2025-10-16 04:17:26,023 | INFO     | process IDs to be killed: [14745] (in reverse order)
[2025-10-16 05:17:57] 2025-10-16 04:17:26,041 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 05:17:57] 2025-10-16 04:17:26,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 05:17:57] 2025-10-16 04:17:26,043 | INFO     | did not find any defunct processes belonging to 14745
[2025-10-16 05:17:57] 2025-10-16 04:17:26,044 | INFO     | did not find any defunct processes belonging to 14745
[2025-10-16 05:17:57] 2025-10-16 04:17:26,044 | INFO     | ready for new job
[2025-10-16 05:17:57] 2025-10-16 04:17:26,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 05:17:57] 2025-10-16 04:17:26,045 | INFO     | ***************************************
[2025-10-16 05:17:57] 2025-10-16 04:17:26,045 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 05:17:57] 2025-10-16 04:17:26,045 | INFO     | ***************************************
[2025-10-16 05:17:57] 2025-10-16 04:17:26,045 | INFO     | 
[2025-10-16 05:17:57] 2025-10-16 04:17:26,066 | INFO     | architecture information:
[2025-10-16 05:17:57] 2025-10-16 04:17:26,066 | INFO     | executing command: cat /etc/os-release
[2025-10-16 05:17:57] 2025-10-16 04:17:26,075 | INFO     | cat /etc/os-release:
[2025-10-16 05:17:57] NAME="CentOS Linux"
[2025-10-16 05:17:57] VERSION="7 (Core)"
[2025-10-16 05:17:57] ID="centos"
[2025-10-16 05:17:57] ID_LIKE="rhel fedora"
[2025-10-16 05:17:57] VERSION_ID="7"
[2025-10-16 05:17:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 05:17:57] ANSI_COLOR="0;31"
[2025-10-16 05:17:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 05:17:57] HOME_URL="https://www.centos.org/"
[2025-10-16 05:17:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 05:17:57] 
[2025-10-16 05:17:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 05:17:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 05:17:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 05:17:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 05:17:57] 
[2025-10-16 05:17:57] 2025-10-16 04:17:26,075 | INFO     | ***************************************
[2025-10-16 05:17:57] 2025-10-16 04:17:26,578 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-16 05:17:57] 2025-10-16 04:17:26,591 | INFO     | sufficient remaining disk space (413896015872 B)
[2025-10-16 05:17:57] 2025-10-16 04:17:26,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 05:17:57] 2025-10-16 04:17:26,591 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 05:17:57] 2025-10-16 04:17:26,591 | INFO     | update_server=False
[2025-10-16 05:17:57] 2025-10-16 04:17:26,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 05:17:57] 2025-10-16 04:17:26,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 05:17:57] 2025-10-16 04:17:26,617 | INFO     | all payload control threads have been joined
[2025-10-16 05:17:57] 2025-10-16 04:17:26,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 05:17:57] 2025-10-16 04:17:26,979 | INFO     | all data control threads have been joined
[2025-10-16 05:17:57] 2025-10-16 04:17:27,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 05:17:57] 2025-10-16 04:17:27,214 | INFO     | aborting loop
[2025-10-16 05:17:57] 2025-10-16 04:17:27,594 | INFO     | [job] retrieve thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:27,597 | INFO     | [job] queue monitor thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:27,622 | INFO     | [payload] control thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:27,729 | INFO     | all job control threads have been joined
[2025-10-16 05:17:57] 2025-10-16 04:17:27,985 | INFO     | [data] control thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:28,013 | INFO     | [payload] validate_post thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:28,114 | INFO     | [data] copytool_in thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:28,216 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:28,220 | INFO     | [job] job monitor thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:28,724 | INFO     | [job] validate thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:28,734 | INFO     | [job] control thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:28,765 | INFO     | [data] copytool_out thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:28,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 05:17:57] 2025-10-16 04:17:28,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:28,992 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:29,018 | INFO     | [payload] failed_post thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:29,056 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:30,895 | INFO     | [monitor] cgroup control has ended
[2025-10-16 05:17:57] 2025-10-16 04:17:32,775 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 05:17:57] 2025-10-16 04:17:32,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115377899328)>', '<ExcThread(monitor, started 140114650986240)>']
[2025-10-16 05:17:57] 2025-10-16 04:17:37,940 | INFO     | all workflow threads have been joined
[2025-10-16 05:17:57] 2025-10-16 04:17:37,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 05:17:57] 2025-10-16 04:17:37,941 | INFO     | traces error code: 0
[2025-10-16 05:17:57] 2025-10-16 04:17:37,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 05:17:57] 2025-10-16 04:17:56,802 | INFO     | PID=8370 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-16 05:17:57] 2025-10-16 04:17:56,802 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 05:17:57] 2025-10-16 04:17:56,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 05:17:57] 2025-10-16 04:17:56,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 05:17:57] 2025-10-16 04:17:56,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 05:17:57] 2025-10-16 04:17:56,802 | INFO     | [monitor] control thread has ended
[2025-10-16 05:17:57] 2025-10-16 04:17:56,887 [wrapper] ==== pilot stdout END ====
[2025-10-16 05:17:57] 2025-10-16 04:17:56,889 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 05:17:57] 2025-10-16 04:17:56,891 [wrapper] pilotpid: 8370
[2025-10-16 05:17:57] 2025-10-16 04:17:56,892 [wrapper] Pilot exit status: 0
[2025-10-16 05:17:57] 2025-10-16 04:17:56,914 [wrapper] pandaids: 6846773216
[2025-10-16 05:17:57] 2025-10-16 04:17:56,931 [wrapper] cleanup supervisor_pilot  1609 8371
[2025-10-16 05:17:57] 2025-10-16 04:17:56,932 [wrapper] Test setup, not cleaning
[2025-10-16 05:17:57] 2025-10-16 04:17:56,933 [wrapper] apfmon messages muted
[2025-10-16 05:17:57] 2025-10-16 04:17:56,935 [wrapper] ==== wrapper stdout END ====
[2025-10-16 05:17:57] 2025-10-16 04:17:56,936 [wrapper] ==== wrapper stderr END ====
[2025-10-16 05:17:57]  *** Error codes and diagnostics ***
[2025-10-16 05:17:57]     "exeErrorCode": 0,
[2025-10-16 05:17:57]     "exeErrorDiag": "",
[2025-10-16 05:17:57]     "pilotErrorCode": 0,
[2025-10-16 05:17:57]     "pilotErrorDiag": "",
[2025-10-16 05:17:57]  *** Listing of results directory ***
[2025-10-16 05:17:57] total 435752
[2025-10-16 05:17:57] -rw-r--r-- 1 m m    557409 Oct 16 00:33 pilot3.tar.gz
[2025-10-16 05:17:57] -rwx------ 1 m m     36292 Oct 16 00:57 runpilot2-wrapper.sh
[2025-10-16 05:17:57] -rw-r--r-- 1 m m      5112 Oct 16 00:58 queuedata.json
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m       100 Oct 16 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 05:17:57] -rwxr-xr-x 1 m m      7986 Oct 16 01:53 run_atlas
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m       105 Oct 16 01:53 job.xml
[2025-10-16 05:17:57] -rw-r--r-- 2 m m     15120 Oct 16 01:53 start_atlas.sh
[2025-10-16 05:17:57] drwxrwx--x 2 m m      4096 Oct 16 01:53 shared
[2025-10-16 05:17:57] -rw-r--r-- 2 m m    569673 Oct 16 01:53 input.tar.gz
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m      5884 Oct 16 01:53 init_data.xml
[2025-10-16 05:17:57] -rw-r--r-- 2 m m 230353877 Oct 16 01:53 EVNT.46771634._000239.pool.root.1
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m         0 Oct 16 01:53 boinc_lockfile
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m      2552 Oct 16 01:54 pandaJob.out
[2025-10-16 05:17:57] -rw------- 1 m m    974310 Oct 16 01:54 agis_schedconf.cvmfs.json
[2025-10-16 05:17:57] drwx------ 5 m m      4096 Oct 16 01:55 pilot3
[2025-10-16 05:17:57] -rw------- 1 m m 209548875 Oct 16 05:13 HITS.46771637._003427.pool.root.1
[2025-10-16 05:17:57] -rw------- 1 m m      1029 Oct 16 05:14 memory_monitor_summary.json
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m       530 Oct 16 05:14 boinc_task_state.xml
[2025-10-16 05:17:57] -rw------- 1 m m         0 Oct 16 05:14 agis_ddmendpoints.agis.ALL.json
[2025-10-16 05:17:57] -rw------- 1 m m    348273 Oct 16 05:16 log.46771637._003427.job.log.tgz.1
[2025-10-16 05:17:57] -rw------- 1 m m        95 Oct 16 05:17 pilot_heartbeat.json
[2025-10-16 05:17:57] -rw------- 1 m m      7784 Oct 16 05:17 heartbeat.json
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m      8192 Oct 16 05:17 boinc_mmap_file
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m        28 Oct 16 05:17 wrapper_checkpoint.txt
[2025-10-16 05:17:57] -rw------- 1 m m       744 Oct 16 05:17 pilotlog.txt
[2025-10-16 05:17:57] -rw------- 1 m m   1637687 Oct 16 05:17 log.46771637._003427.job.log.1
[2025-10-16 05:17:57] -rw------- 1 m m       357 Oct 16 05:17 output.list
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m       620 Oct 16 05:17 runtime_log
[2025-10-16 05:17:57] -rw------- 1 m m   2007040 Oct 16 05:17 result.tar.gz
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m      8618 Oct 16 05:17 runtime_log.err
[2025-10-16 05:17:57] -rw------- 1 m m       645 Oct 16 05:17 gb1KDmHYQT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdvWMDmopu2Zn.diag
[2025-10-16 05:17:57] -rw-rw-r-- 1 m m     20880 Oct 16 05:17 stderr.txt
[2025-10-16 05:17:57] HITS file was successfully produced:
[2025-10-16 05:17:57] -rw------- 1 m m 209548875 Oct 16 05:13 shared/HITS.pool.root.1
[2025-10-16 05:17:57]  *** Contents of shared directory: ***
[2025-10-16 05:17:57] total 432140
[2025-10-16 05:17:57] -rw-r--r-- 2 m m     15120 Oct 16 01:53 start_atlas.sh
[2025-10-16 05:17:57] -rw-r--r-- 2 m m    569673 Oct 16 01:53 input.tar.gz
[2025-10-16 05:17:57] -rw-r--r-- 2 m m 230353877 Oct 16 01:53 ATLAS.root_0
[2025-10-16 05:17:57] -rw------- 1 m m 209548875 Oct 16 05:13 HITS.pool.root.1
[2025-10-16 05:17:57] -rw------- 1 m m   2007040 Oct 16 05:17 result.tar.gz
05:17:58 (4058): run_atlas exited; CPU time 46065.844471
05:17:58 (4058): called boinc_finish(0)

</stderr_txt>
]]>

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