| Name | iWXMDmEKQT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX9nNDmPtIMRm_0 |
| Workunit | 236322691 |
| Created | 15 Oct 2025, 23:48:19 UTC |
| Sent | 16 Oct 2025, 0:03:11 UTC |
| Report deadline | 24 Oct 2025, 0:03:11 UTC |
| Received | 16 Oct 2025, 4:50:02 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 10835055 |
| Run time | 1 hours 3 min 19 sec |
| CPU time | 5 hours 40 min 41 sec |
| Validate state | Valid |
| Credit | 421.68 |
| Device peak FLOPS | 45.39 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.60 GB |
| Peak swap size | 3.15 GB |
| Peak disk usage | 585.16 MB |
Stderr output
<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
05:45:32 (369662): wrapper (7.7.26015): starting
05:45:32 (369662): wrapper: running run_atlas (--nthreads 6)
[2025-10-16 05:45:32] Arguments: --nthreads 6
[2025-10-16 05:45:32] Threads: 6
[2025-10-16 05:45:32] Checking for CVMFS
[2025-10-16 05:45:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 05:45:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 05:45:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 05:45:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 05:45:32] 2.11.5.0 55760 222 52888 151758 3 57 3040752 4194304 1836 130560 0 683378 99.995 12058 130 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2025-10-16 05:45:32] CVMFS is ok
[2025-10-16 05:45:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 05:45:32] Checking for apptainer binary...
[2025-10-16 05:45:32] apptainer is not installed, using version from CVMFS
[2025-10-16 05:45:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 05:45:32] boinc-b450f
[2025-10-16 05:45:32] apptainer works
[2025-10-16 05:45:32] Set ATHENA_PROC_NUMBER=6
[2025-10-16 05:45:32] Set ATHENA_CORE_NUMBER=6
[2025-10-16 05:45:32] Starting ATLAS job with PandaID=6846769025
[2025-10-16 05:45:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 06:48:48] *** The last 200 lines of the pilot log: ***
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | current memory leak: -64.55 B/s (using 52 data points, chi2=0.01)
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | could have reported an average CPU frequency of 3975 MHz (6 samples)
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | ..............................
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . Timing measurements:
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . get job = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . initial setup = 2 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . payload setup = 2 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . stage-in = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . payload execution = 3600 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . stage-out = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . log creation = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | ..............................
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | building log extracts (sent to the server as 'pilotLog')
[2025-10-16 06:48:48] 2025-10-16 04:47:55,358 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6846769025/pilotlog.txt
[2025-10-16 06:48:48] 2025-10-16 04:47:55,363 | WARNING | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-16 06:48:48] - Log from pilotlog.txt -
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | mean x: 1760588215.5
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | mean y: 2490942.6923076925
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | -- intersect: 113656823067.5698
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | intersect: 113656823067.5698
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | chi2: 0.011814317660011633
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | -- intersect: 113656823067.5698
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | current memory leak: -64.55 B/s (using 52 data points, chi2=0.01)
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | could have reported an average CPU frequency of 3975 MHz (6 samples)
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | ..............................
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . Timing measurements:
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . get job = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . initial setup = 2 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . payload setup = 2 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . stage-in = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . payload execution = 3600 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . stage-out = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . log creation = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | ..............................
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | building log extracts (sent to the server as 'pilotLog')
[2025-10-16 06:48:48] 2025-10-16 04:47:55,358 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6846769025/pilotlog.txt
[2025-10-16 06:48:48] 2025-10-16 04:47:55,363 | WARNING |
[2025-10-16 06:48:48] [begin log extracts]
[2025-10-16 06:48:48] - Log from pilotlog.txt -
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | mean x: 1760588215.5
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | mean y: 2490942.6923076925
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | -- intersect: 113656823067.5698
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | intersect: 113656823067.5698
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | chi2: 0.011814317660011633
[2025-10-16 06:48:48] 2025-10-16 04:47:55,356 | INFO | -- intersect: 113656823067.5698
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | current memory leak: -64.55 B/s (using 52 data points, chi2=0.01)
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | could have reported an average CPU frequency of 3975 MHz (6 samples)
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | ..............................
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . Timing measurements:
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . get job = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . initial setup = 2 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . payload setup = 2 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . stage-in = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . payload execution = 3600 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . stage-out = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | . log creation = 0 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | ..............................
[2025-10-16 06:48:48] 2025-10-16 04:47:55,357 | INFO | building log extracts (sent to the server as 'pilotLog')
[2025-10-16 06:48:48] 2025-10-16 04:47:55,358 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6846769025/pilotlog.txt
[2025-10-16 06:48:48] [end log extracts]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,363 | WARNING | pilotErrorCodes = [1305, 1328] (will report primary/first error code)
[2025-10-16 06:48:48] 2025-10-16 04:47:55,363 | WARNING | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a
[2025-10-16 06:48:48] 2025-10-16 04:47:55,544 | INFO |
[2025-10-16 06:48:48] 2025-10-16 04:47:55,544 | INFO | job summary report
[2025-10-16 06:48:48] 2025-10-16 04:47:55,544 | INFO | --------------------------------------------------
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | PanDA job id: 6846769025
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | task id: 46771637
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-16 06:45:49,160 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | error 2/2: 1328: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: "Co
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | pilot error code: 1328
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | pilot error diag: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: "C
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | status: LOG_TRANSFER = DONE
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | pilot state: failed
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | transexitcode: 65
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | exeerrorcode: 0
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | exeerrordiag:
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | exitcode: 65
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | exitmsg: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: "CoreDumpSvc FATAL Caught fatal signal. Printing details to stdout."
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | cpuconsumptiontime: 20397 s
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | nevents: 0
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | neventsw: 0
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | pid: 381396
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | pgrp: 381396
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | corecount: 6
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | event service: False
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | sizes: {0: 2348925, 2: 2349187, 11: 2349215, 3607: 2377684, 3608: 2382042, 3726: 2382236}
[2025-10-16 06:48:48] 2025-10-16 04:47:55,545 | INFO | --------------------------------------------------
[2025-10-16 06:48:48] 2025-10-16 04:47:55,546 | INFO |
[2025-10-16 06:48:48] 2025-10-16 04:47:55,546 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue jobs had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue payloads had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue data_in had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue data_out had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue current_data_in had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue completed_jobids has 1 job(s)
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | queue messages had 0 job(s) [purged]
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | job 6846769025 has completed (purged errors)
[2025-10-16 06:48:48] 2025-10-16 04:47:55,554 | INFO | overall cleanup function is called
[2025-10-16 06:48:48] 2025-10-16 04:47:56,560 | INFO | --- collectZombieJob: --- 10, [381396]
[2025-10-16 06:48:48] 2025-10-16 04:47:56,560 | INFO | zombie collector waiting for pid 381396
[2025-10-16 06:48:48] 2025-10-16 04:47:56,560 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 06:48:48] 2025-10-16 04:47:56,561 | INFO | collected zombie processes
[2025-10-16 06:48:48] 2025-10-16 04:47:56,561 | INFO | will attempt to kill all subprocesses of pid=381396
[2025-10-16 06:48:48] 2025-10-16 04:47:56,635 | INFO | process IDs to be killed: [381396] (in reverse order)
[2025-10-16 06:48:48] 2025-10-16 04:47:56,658 | WARNING | found no corresponding commands to process id(s)
[2025-10-16 06:48:48] 2025-10-16 04:47:56,659 | INFO | Do not look for orphan processes in BOINC jobs
[2025-10-16 06:48:48] 2025-10-16 04:47:56,660 | INFO | did not find any defunct processes belonging to 381396
[2025-10-16 06:48:48] 2025-10-16 04:47:56,662 | INFO | did not find any defunct processes belonging to 381396
[2025-10-16 06:48:48] 2025-10-16 04:47:56,662 | INFO | ready for new job
[2025-10-16 06:48:48] 2025-10-16 04:47:56,662 | INFO | pilot has finished with previous job - re-establishing logging
[2025-10-16 06:48:48] 2025-10-16 04:47:56,663 | INFO | ***************************************
[2025-10-16 06:48:48] 2025-10-16 04:47:56,663 | INFO | *** PanDA Pilot version 3.11.0.29 ***
[2025-10-16 06:48:48] 2025-10-16 04:47:56,663 | INFO | ***************************************
[2025-10-16 06:48:48] 2025-10-16 04:47:56,663 | INFO |
[2025-10-16 06:48:48] 2025-10-16 04:47:56,664 | INFO | architecture information:
[2025-10-16 06:48:48] 2025-10-16 04:47:56,664 | INFO | executing command: cat /etc/os-release
[2025-10-16 06:48:48] 2025-10-16 04:47:56,670 | INFO | cat /etc/os-release:
[2025-10-16 06:48:48] NAME="CentOS Linux"
[2025-10-16 06:48:48] VERSION="7 (Core)"
[2025-10-16 06:48:48] ID="centos"
[2025-10-16 06:48:48] ID_LIKE="rhel fedora"
[2025-10-16 06:48:48] VERSION_ID="7"
[2025-10-16 06:48:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 06:48:48] ANSI_COLOR="0;31"
[2025-10-16 06:48:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 06:48:48] HOME_URL="https://www.centos.org/"
[2025-10-16 06:48:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 06:48:48]
[2025-10-16 06:48:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 06:48:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 06:48:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 06:48:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 06:48:48]
[2025-10-16 06:48:48] 2025-10-16 04:47:56,670 | INFO | ***************************************
[2025-10-16 06:48:48] 2025-10-16 04:47:57,173 | INFO | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-16 06:48:48] 2025-10-16 04:47:57,181 | INFO | sufficient remaining disk space (16867393536 B)
[2025-10-16 06:48:48] 2025-10-16 04:47:57,181 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 06:48:48] 2025-10-16 04:47:57,181 | INFO | current server update state: UPDATING_FINAL
[2025-10-16 06:48:48] 2025-10-16 04:47:57,181 | INFO | update_server=False
[2025-10-16 06:48:48] 2025-10-16 04:47:57,181 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 06:48:48] 2025-10-16 04:47:57,181 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 06:48:48] 2025-10-16 04:47:57,182 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 06:48:48] 2025-10-16 04:47:57,182 | INFO | aborting loop
[2025-10-16 06:48:48] 2025-10-16 04:47:57,700 | INFO | all payload control threads have been joined
[2025-10-16 06:48:48] 2025-10-16 04:47:57,931 | INFO | all job control threads have been joined
[2025-10-16 06:48:48] 2025-10-16 04:47:58,006 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 06:48:48] 2025-10-16 04:47:58,031 | INFO | all data control threads have been joined
[2025-10-16 06:48:48] 2025-10-16 04:47:58,187 | INFO | [job] retrieve thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,187 | INFO | [job] queue monitor thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,187 | INFO | [job] job monitor thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,254 | INFO | [payload] execute_payloads thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,347 | INFO | [payload] failed_post thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,352 | INFO | [job] create_data_payload thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,427 | INFO | [job] validate thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,557 | INFO | [payload] validate_pre thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,605 | INFO | [payload] validate_post thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,690 | INFO | [payload] run_realtimelog thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,704 | INFO | [payload] control thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:58,936 | INFO | [job] control thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:59,036 | INFO | [data] control thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:47:59,290 | INFO | [data] copytool_in thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:48:00,011 | INFO | [data] copytool_out thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:48:00,524 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 06:48:48] 2025-10-16 04:48:04,530 | INFO | [data] queue_monitor thread has finished
[2025-10-16 06:48:48] 2025-10-16 04:48:27,185 | INFO | PID=373470 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-16 06:48:48] 2025-10-16 04:48:27,186 | INFO | .. there are 3 such processes running
[2025-10-16 06:48:48] 2025-10-16 04:48:27,186 | INFO | found 0 job(s) in 20 queues
[2025-10-16 06:48:48] 2025-10-16 04:48:27,186 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 06:48:48] 2025-10-16 04:48:27,186 | WARNING | will wait for a maximum of 300 s for threads to finish
[2025-10-16 06:48:48] 2025-10-16 04:48:43,104 | INFO | [monitor] cgroup control has ended
[2025-10-16 06:48:48] 2025-10-16 04:48:43,760 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140255140988736)>', '<ExcThread(monitor, started 140254723938048)>']
[2025-10-16 06:48:48] 2025-10-16 04:48:44,269 | WARNING | job_aborted has been set - aborting pilot monitoring
[2025-10-16 06:48:48] 2025-10-16 04:48:44,269 | INFO | [monitor] control thread has ended
[2025-10-16 06:48:48] 2025-10-16 04:48:48,784 | INFO | all workflow threads have been joined
[2025-10-16 06:48:48] 2025-10-16 04:48:48,785 | INFO | end of generic workflow (traces error code: 0)
[2025-10-16 06:48:48] 2025-10-16 04:48:48,785 | INFO | traces error code: 0
[2025-10-16 06:48:48] 2025-10-16 04:48:48,785 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 06:48:48] 2025-10-16 04:48:48,849 [wrapper] ==== pilot stdout END ====
[2025-10-16 06:48:48] 2025-10-16 04:48:48,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 06:48:48] 2025-10-16 04:48:48,852 [wrapper] pilotpid: 373470
[2025-10-16 06:48:48] 2025-10-16 04:48:48,853 [wrapper] Pilot exit status: 0
[2025-10-16 06:48:48] 2025-10-16 04:48:48,858 [wrapper] pandaids: 6846769025
[2025-10-16 06:48:48] 2025-10-16 04:48:48,872 [wrapper] cleanup supervisor_pilot 460824 373471
[2025-10-16 06:48:48] 2025-10-16 04:48:48,873 [wrapper] Test setup, not cleaning
[2025-10-16 06:48:48] 2025-10-16 04:48:48,874 [wrapper] apfmon messages muted
[2025-10-16 06:48:48] 2025-10-16 04:48:48,876 [wrapper] ==== wrapper stdout END ====
[2025-10-16 06:48:48] 2025-10-16 04:48:48,877 [wrapper] ==== wrapper stderr END ====
[2025-10-16 06:48:48] *** Error codes and diagnostics ***
[2025-10-16 06:48:48] "exeErrorCode": 0,
[2025-10-16 06:48:48] "exeErrorDiag": "",
[2025-10-16 06:48:48] "pilotErrorCode": 1305,
[2025-10-16 06:48:48] "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc FATAL Caught fatal signal. Printing details to stdout.\"",
[2025-10-16 06:48:48] *** Listing of results directory ***
[2025-10-16 06:48:48] total 225559
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 557409 Oct 16 01:33 pilot3.tar.gz
[2025-10-16 06:48:48] -rwx------ 1 boinc boinc 36292 Oct 16 01:43 runpilot2-wrapper.sh
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 5112 Oct 16 01:44 queuedata.json
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 100 Oct 16 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 06:48:48] -rwxr-xr-x 1 boinc boinc 7986 Oct 16 05:45 run_atlas
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 105 Oct 16 05:45 job.xml
[2025-10-16 06:48:48] -rw-r--r-- 2 boinc boinc 15120 Oct 16 05:45 start_atlas.sh
[2025-10-16 06:48:48] drwxrwx--x 2 boinc boinc 5 Oct 16 05:45 shared
[2025-10-16 06:48:48] -rw-r--r-- 2 boinc boinc 569672 Oct 16 05:45 input.tar.gz
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 6795 Oct 16 05:45 init_data.xml
[2025-10-16 06:48:48] -rw-r--r-- 2 boinc boinc 229174463 Oct 16 05:45 EVNT.46771634._000164.pool.root.1
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 0 Oct 16 05:45 boinc_lockfile
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 2552 Oct 16 05:45 pandaJob.out
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 974318 Oct 16 05:45 agis_schedconf.cvmfs.json
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 1560740 Oct 16 05:45 agis_ddmendpoints.agis.ALL.json
[2025-10-16 06:48:48] drwx------ 5 boinc boinc 22 Oct 16 05:45 pilot3
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 529 Oct 16 06:45 boinc_task_state.xml
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 1034 Oct 16 06:45 memory_monitor_summary.json
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 270095 Oct 16 06:45 log.46771637._001553.job.log.tgz.1
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 9702 Oct 16 06:47 heartbeat.json
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 27 Oct 16 06:48 wrapper_checkpoint.txt
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 8192 Oct 16 06:48 boinc_mmap_file
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 95 Oct 16 06:48 pilot_heartbeat.json
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 4829 Oct 16 06:48 pilotlog.txt
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 577801 Oct 16 06:48 log.46771637._001553.job.log.1
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 620 Oct 16 06:48 runtime_log
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 870400 Oct 16 06:48 result.tar.gz
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 188 Oct 16 06:48 output.list
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 8650 Oct 16 06:48 runtime_log.err
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 657 Oct 16 06:48 iWXMDmEKQT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX9nNDmPtIMRm.diag
[2025-10-16 06:48:48] -rw-r--r-- 1 boinc boinc 21537 Oct 16 06:48 stderr.txt
[2025-10-16 06:48:48] No HITS result produced
[2025-10-16 06:48:48] *** Contents of shared directory: ***
[2025-10-16 06:48:48] total 224509
[2025-10-16 06:48:48] -rw-r--r-- 2 boinc boinc 15120 Oct 16 05:45 start_atlas.sh
[2025-10-16 06:48:48] -rw-r--r-- 2 boinc boinc 569672 Oct 16 05:45 input.tar.gz
[2025-10-16 06:48:48] -rw-r--r-- 2 boinc boinc 229174463 Oct 16 05:45 ATLAS.root_0
[2025-10-16 06:48:48] -rw------- 1 boinc boinc 870400 Oct 16 06:48 result.tar.gz
06:48:50 (369662): run_atlas exited; CPU time 20441.711583
06:48:50 (369662): called boinc_finish(0)
</stderr_txt>
]]>
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