Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
04:35:44 (290613): wrapper (7.7.26015): starting
04:35:44 (290613): wrapper: running run_atlas (--nthreads 6)
[2025-10-16 04:35:44] Arguments: --nthreads 6
[2025-10-16 04:35:44] Threads: 6
[2025-10-16 04:35:44] Checking for CVMFS
[2025-10-16 04:35:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 04:35:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 04:35:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 04:35:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 04:35:44] 2.11.5.0 55760 152 51780 151756 0 188 3025359 4194305 1792 130560 0 511033 99.996 8061 95 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2025-10-16 04:35:44] CVMFS is ok
[2025-10-16 04:35:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 04:35:44] Checking for apptainer binary...
[2025-10-16 04:35:44] apptainer is not installed, using version from CVMFS
[2025-10-16 04:35:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 04:35:44] boinc-b450f
[2025-10-16 04:35:44] apptainer works
[2025-10-16 04:35:44] Set ATHENA_PROC_NUMBER=6
[2025-10-16 04:35:44] Set ATHENA_CORE_NUMBER=6
[2025-10-16 04:35:44] Starting ATLAS job with PandaID=6846768660
[2025-10-16 04:35:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 05:48:01]  *** The last 200 lines of the pilot log: ***
[2025-10-16 05:48:01]  is_tar=False
[2025-10-16 05:48:01]  lfn=log.46771637._001241.job.log.tgz.1
[2025-10-16 05:48:01]  mtime=0
[2025-10-16 05:48:01]  protocol_id=None
[2025-10-16 05:48:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-16 05:48:01]  replicas=None
[2025-10-16 05:48:01]  scope=mc23_13p6TeV
[2025-10-16 05:48:01]  status=None
[2025-10-16 05:48:01]  status_code=0
[2025-10-16 05:48:01]  storage_token=
[2025-10-16 05:48:01]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6846768660/log.46771637._001241.job.log.tgz.1
[2025-10-16 05:48:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/52/log.46771637._001241.job.log.tgz.1
[2025-10-16 05:48:01]  workdir=None
[2025-10-16 05:48:01] ]
[2025-10-16 05:48:01] 2025-10-16 03:46:50,222 | INFO     | transferring file log.46771637._001241.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6846768660/log.46771637._001241.job.log.tgz.1 to /var/lib/boinc
[2025-10-16 05:48:01] 2025-10-16 03:46:50,222 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6846768660/log.46771637._001241.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.467716
[2025-10-16 05:48:01] 2025-10-16 03:46:50,228 | INFO     | adding to output.list: log.46771637._001241.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/52/log.46771637._001241.job.log.tg
[2025-10-16 05:48:01] 2025-10-16 03:46:50,229 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-16 05:48:01] 2025-10-16 03:46:50,229 | INFO     | summary of transferred files:
[2025-10-16 05:48:01] 2025-10-16 03:46:50,229 | INFO     |  -- lfn=log.46771637._001241.job.log.tgz.1, status_code=0, status=transferred
[2025-10-16 05:48:01] 2025-10-16 03:46:50,229 | INFO     | stage-out finished correctly
[2025-10-16 05:48:01] 2025-10-16 03:46:50,251 | INFO     | time since job start (4262s) is within the limit (172800.0s)
[2025-10-16 05:48:01] 2025-10-16 03:46:51,072 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-16 05:48:01] 2025-10-16 03:46:51,759 | INFO     | monitor loop #328: job 0:6846768660 is in state 'finished'
[2025-10-16 05:48:01] 2025-10-16 03:46:51,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-16 05:48:01] 2025-10-16 03:46:52,271 | INFO     | time since job start (4264s) is within the limit (172800.0s)
[2025-10-16 05:48:01] 2025-10-16 03:46:52,541 | INFO     | job 6846768660 has state=finished
[2025-10-16 05:48:01] 2025-10-16 03:46:52,542 | INFO     | preparing for final server update for job 6846768660 in state='finished'
[2025-10-16 05:48:01] 2025-10-16 03:46:52,542 | INFO     | this job has now completed (state=finished)
[2025-10-16 05:48:01] 2025-10-16 03:46:52,542 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-16 05:48:01] 2025-10-16 03:46:52,542 | INFO     | log transfer has been attempted: DONE
[2025-10-16 05:48:01] 2025-10-16 03:46:52,542 | INFO     | job 6846768660 has finished - writing final server update
[2025-10-16 05:48:01] 2025-10-16 03:46:52,542 | INFO     | total number of processed events: 400 (read)
[2025-10-16 05:48:01] 2025-10-16 03:46:52,544 | INFO     | executing command: lscpu
[2025-10-16 05:48:01] 2025-10-16 03:46:52,553 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-16 05:48:01] 2025-10-16 03:46:53,900 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-16 05:48:01] 2025-10-16 03:46:53,902 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3984.460416666667
[2025-10-16 05:48:01] 2025-10-16 03:46:53,903 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6846768660/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 05:48:01] 2025-10-16 03:46:53,904 | INFO     | extracted standard info from prmon json
[2025-10-16 05:48:01] 2025-10-16 03:46:53,904 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 05:48:01] 2025-10-16 03:46:53,904 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 05:48:01] 2025-10-16 03:46:53,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 05:48:01] 2025-10-16 03:46:53,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | fitting pss+swap vs Time
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | sum of square deviations: 77515872.0
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | sum of deviations: -3965969899.999999
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | mean x: 1760584360.0
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | mean y: 2482320.9365079366
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | -- intersect: 90079835487.66296
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | intersect: 90079835487.66296
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | chi2: 0.012994396120536543
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | -- intersect: 90079835487.66296
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | current memory leak: -51.16 B/s (using 63 data points, chi2=0.01)
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | could have reported an average CPU frequency of 3978 MHz (6 samples)
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | ..............................
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | . Timing measurements:
[2025-10-16 05:48:01] 2025-10-16 03:46:53,905 | INFO     | . get job = 0 s
[2025-10-16 05:48:01] 2025-10-16 03:46:53,906 | INFO     | . initial setup = 1 s
[2025-10-16 05:48:01] 2025-10-16 03:46:53,906 | INFO     | . payload setup = 1 s
[2025-10-16 05:48:01] 2025-10-16 03:46:53,906 | INFO     | . stage-in = 0 s
[2025-10-16 05:48:01] 2025-10-16 03:46:53,906 | INFO     | . payload execution = 4243 s
[2025-10-16 05:48:01] 2025-10-16 03:46:53,906 | INFO     | . stage-out = 0 s
[2025-10-16 05:48:01] 2025-10-16 03:46:53,906 | INFO     | . log creation = 0 s
[2025-10-16 05:48:01] 2025-10-16 03:46:53,906 | INFO     | ..............................
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | 
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | job summary report
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | --------------------------------------------------
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | PanDA job id: 6846768660
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | task id: 46771637
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | errors: (none)
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | pilot state: finished 
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | transexitcode: 0
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | exeerrorcode: 0
[2025-10-16 05:48:01] 2025-10-16 03:46:54,134 | INFO     | exeerrordiag: 
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | exitcode: 0
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | exitmsg: OK
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | cpuconsumptiontime: 24365 s
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | nevents: 400
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | neventsw: 0
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | pid: 302329
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | pgrp: 302329
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | corecount: 6
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | event service: False
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | sizes: {0: 2348927, 1: 2349189, 11: 2349217, 4248: 2375418, 4249: 2384430, 4250: 2384486, 4253: 2384808}
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | --------------------------------------------------
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | 
[2025-10-16 05:48:01] 2025-10-16 03:46:54,135 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 05:48:01] 2025-10-16 03:46:54,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,143 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 05:48:01] 2025-10-16 03:46:54,143 | INFO     | job 6846768660 has completed (purged errors)
[2025-10-16 05:48:01] 2025-10-16 03:46:54,143 | INFO     | overall cleanup function is called
[2025-10-16 05:48:01] 2025-10-16 03:46:55,148 | INFO     | --- collectZombieJob: --- 10, [302329]
[2025-10-16 05:48:01] 2025-10-16 03:46:55,149 | INFO     | zombie collector waiting for pid 302329
[2025-10-16 05:48:01] 2025-10-16 03:46:55,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 05:48:01] 2025-10-16 03:46:55,149 | INFO     | collected zombie processes
[2025-10-16 05:48:01] 2025-10-16 03:46:55,149 | INFO     | will attempt to kill all subprocesses of pid=302329
[2025-10-16 05:48:01] 2025-10-16 03:46:55,227 | INFO     | process IDs to be killed: [302329] (in reverse order)
[2025-10-16 05:48:01] 2025-10-16 03:46:55,244 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 05:48:01] 2025-10-16 03:46:55,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 05:48:01] 2025-10-16 03:46:55,246 | INFO     | did not find any defunct processes belonging to 302329
[2025-10-16 05:48:01] 2025-10-16 03:46:55,248 | INFO     | did not find any defunct processes belonging to 302329
[2025-10-16 05:48:01] 2025-10-16 03:46:55,248 | INFO     | ready for new job
[2025-10-16 05:48:01] 2025-10-16 03:46:55,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 05:48:01] 2025-10-16 03:46:55,249 | INFO     | ***************************************
[2025-10-16 05:48:01] 2025-10-16 03:46:55,249 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 05:48:01] 2025-10-16 03:46:55,249 | INFO     | ***************************************
[2025-10-16 05:48:01] 2025-10-16 03:46:55,249 | INFO     | 
[2025-10-16 05:48:01] 2025-10-16 03:46:55,249 | INFO     | architecture information:
[2025-10-16 05:48:01] 2025-10-16 03:46:55,250 | INFO     | executing command: cat /etc/os-release
[2025-10-16 05:48:01] 2025-10-16 03:46:55,254 | INFO     | cat /etc/os-release:
[2025-10-16 05:48:01] NAME="CentOS Linux"
[2025-10-16 05:48:01] VERSION="7 (Core)"
[2025-10-16 05:48:01] ID="centos"
[2025-10-16 05:48:01] ID_LIKE="rhel fedora"
[2025-10-16 05:48:01] VERSION_ID="7"
[2025-10-16 05:48:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 05:48:01] ANSI_COLOR="0;31"
[2025-10-16 05:48:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 05:48:01] HOME_URL="https://www.centos.org/"
[2025-10-16 05:48:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 05:48:01] 
[2025-10-16 05:48:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 05:48:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 05:48:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 05:48:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 05:48:01] 
[2025-10-16 05:48:01] 2025-10-16 03:46:55,254 | INFO     | ***************************************
[2025-10-16 05:48:01] 2025-10-16 03:46:55,757 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-16 05:48:01] 2025-10-16 03:46:55,764 | INFO     | sufficient remaining disk space (16804478976 B)
[2025-10-16 05:48:01] 2025-10-16 03:46:55,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 05:48:01] 2025-10-16 03:46:55,764 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 05:48:01] 2025-10-16 03:46:55,764 | INFO     | update_server=False
[2025-10-16 05:48:01] 2025-10-16 03:46:55,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 05:48:01] 2025-10-16 03:46:55,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 05:48:01] 2025-10-16 03:46:55,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 05:48:01] 2025-10-16 03:46:55,765 | INFO     | aborting loop
[2025-10-16 05:48:01] 2025-10-16 03:46:55,774 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 05:48:01] 2025-10-16 03:46:56,207 | INFO     | all data control threads have been joined
[2025-10-16 05:48:01] 2025-10-16 03:46:56,769 | INFO     | [job] retrieve thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:56,770 | INFO     | [job] queue monitor thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:56,770 | INFO     | [job] job monitor thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:56,855 | INFO     | all payload control threads have been joined
[2025-10-16 05:48:01] 2025-10-16 03:46:57,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 05:48:01] 2025-10-16 03:46:57,212 | INFO     | [data] control thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:57,331 | INFO     | all job control threads have been joined
[2025-10-16 05:48:01] 2025-10-16 03:46:57,360 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:57,443 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:57,612 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:57,649 | INFO     | [job] validate thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:57,775 | INFO     | [data] copytool_in thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:57,780 | INFO     | [data] copytool_out thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:57,860 | INFO     | [payload] control thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:58,014 | INFO     | [payload] validate_post thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:58,265 | INFO     | [payload] failed_post thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:46:58,337 | INFO     | [job] control thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:47:01,153 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:47:05,984 | INFO     | job.realtimelogging is not enabled
[2025-10-16 05:48:01] 2025-10-16 03:47:06,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 05:48:01] 2025-10-16 03:47:25,451 | INFO     | PID=294426 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-16 05:48:01] 2025-10-16 03:47:25,451 | INFO     | .. there are 3 such processes running
[2025-10-16 05:48:01] 2025-10-16 03:47:25,451 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 05:48:01] 2025-10-16 03:47:25,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 05:48:01] 2025-10-16 03:47:25,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 05:48:01] 2025-10-16 03:47:54,694 | INFO     | [monitor] cgroup control has ended
[2025-10-16 05:48:01] 2025-10-16 03:47:56,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749345318720)>', '<ExcThread(monitor, started 139748429522688)>']
[2025-10-16 05:48:01] 2025-10-16 03:47:56,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 05:48:01] 2025-10-16 03:47:56,590 | INFO     | [monitor] control thread has ended
[2025-10-16 05:48:01] 2025-10-16 03:48:01,440 | INFO     | all workflow threads have been joined
[2025-10-16 05:48:01] 2025-10-16 03:48:01,440 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 05:48:01] 2025-10-16 03:48:01,440 | INFO     | traces error code: 0
[2025-10-16 05:48:01] 2025-10-16 03:48:01,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 05:48:01] 2025-10-16 03:48:01,495 [wrapper] ==== pilot stdout END ====
[2025-10-16 05:48:01] 2025-10-16 03:48:01,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 05:48:01] 2025-10-16 03:48:01,497 [wrapper] pilotpid: 294426
[2025-10-16 05:48:01] 2025-10-16 03:48:01,497 [wrapper] Pilot exit status: 0
[2025-10-16 05:48:01] 2025-10-16 03:48:01,502 [wrapper] pandaids: 6846768660
[2025-10-16 05:48:01] 2025-10-16 03:48:01,512 [wrapper] cleanup supervisor_pilot  360018 294427
[2025-10-16 05:48:01] 2025-10-16 03:48:01,513 [wrapper] Test setup, not cleaning
[2025-10-16 05:48:01] 2025-10-16 03:48:01,513 [wrapper] apfmon messages muted
[2025-10-16 05:48:01] 2025-10-16 03:48:01,514 [wrapper] ==== wrapper stdout END ====
[2025-10-16 05:48:01] 2025-10-16 03:48:01,515 [wrapper] ==== wrapper stderr END ====
[2025-10-16 05:48:01]  *** Error codes and diagnostics ***
[2025-10-16 05:48:01]     "exeErrorCode": 0,
[2025-10-16 05:48:01]     "exeErrorDiag": "",
[2025-10-16 05:48:01]     "pilotErrorCode": 0,
[2025-10-16 05:48:01]     "pilotErrorDiag": "",
[2025-10-16 05:48:01]  *** Listing of results directory ***
[2025-10-16 05:48:01] total 430137
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc    557409 Oct 16 01:33 pilot3.tar.gz
[2025-10-16 05:48:01] -rwx------ 1 boinc boinc     36292 Oct 16 01:42 runpilot2-wrapper.sh
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc      5112 Oct 16 01:44 queuedata.json
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc       100 Oct 16 04:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 05:48:01] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 04:35 run_atlas
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc       105 Oct 16 04:35 job.xml
[2025-10-16 05:48:01] -rw-r--r-- 2 boinc boinc 231473327 Oct 16 04:35 EVNT.46771634._000151.pool.root.1
[2025-10-16 05:48:01] -rw-r--r-- 2 boinc boinc     15120 Oct 16 04:35 start_atlas.sh
[2025-10-16 05:48:01] drwxrwx--x 2 boinc boinc         5 Oct 16 04:35 shared
[2025-10-16 05:48:01] -rw-r--r-- 2 boinc boinc    569674 Oct 16 04:35 input.tar.gz
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc      6795 Oct 16 04:35 init_data.xml
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc         0 Oct 16 04:35 boinc_lockfile
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc      2553 Oct 16 04:35 pandaJob.out
[2025-10-16 05:48:01] -rw------- 1 boinc boinc    974318 Oct 16 04:35 agis_schedconf.cvmfs.json
[2025-10-16 05:48:01] -rw------- 1 boinc boinc   1560740 Oct 16 04:35 agis_ddmendpoints.agis.ALL.json
[2025-10-16 05:48:01] drwx------ 5 boinc boinc        22 Oct 16 04:35 pilot3
[2025-10-16 05:48:01] -rw------- 1 boinc boinc 207050045 Oct 16 05:46 HITS.46771637._001241.pool.root.1
[2025-10-16 05:48:01] -rw------- 1 boinc boinc      1035 Oct 16 05:46 memory_monitor_summary.json
[2025-10-16 05:48:01] -rw------- 1 boinc boinc    293537 Oct 16 05:46 log.46771637._001241.job.log.tgz.1
[2025-10-16 05:48:01] -rw------- 1 boinc boinc      7760 Oct 16 05:46 heartbeat.json
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc       529 Oct 16 05:46 boinc_task_state.xml
[2025-10-16 05:48:01] -rw------- 1 boinc boinc        95 Oct 16 05:47 pilot_heartbeat.json
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc        27 Oct 16 05:47 wrapper_checkpoint.txt
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc      8192 Oct 16 05:47 boinc_mmap_file
[2025-10-16 05:48:01] -rw------- 1 boinc boinc      4901 Oct 16 05:48 pilotlog.txt
[2025-10-16 05:48:01] -rw------- 1 boinc boinc       357 Oct 16 05:48 output.list
[2025-10-16 05:48:01] -rw------- 1 boinc boinc    646982 Oct 16 05:48 log.46771637._001241.job.log.1
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc      8802 Oct 16 05:48 runtime_log.err
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc       620 Oct 16 05:48 runtime_log
[2025-10-16 05:48:01] -rw------- 1 boinc boinc    962560 Oct 16 05:48 result.tar.gz
[2025-10-16 05:48:01] -rw------- 1 boinc boinc       657 Oct 16 05:48 0GCODmuJQT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv8nNDmVnHzwm.diag
[2025-10-16 05:48:01] -rw-r--r-- 1 boinc boinc     21225 Oct 16 05:48 stderr.txt
[2025-10-16 05:48:01] HITS file was successfully produced:
[2025-10-16 05:48:01] -rw------- 1 boinc boinc 207050045 Oct 16 05:46 shared/HITS.pool.root.1
[2025-10-16 05:48:01]  *** Contents of shared directory: ***
[2025-10-16 05:48:01] total 429081
[2025-10-16 05:48:01] -rw-r--r-- 2 boinc boinc 231473327 Oct 16 04:35 ATLAS.root_0
[2025-10-16 05:48:01] -rw-r--r-- 2 boinc boinc     15120 Oct 16 04:35 start_atlas.sh
[2025-10-16 05:48:01] -rw-r--r-- 2 boinc boinc    569674 Oct 16 04:35 input.tar.gz
[2025-10-16 05:48:01] -rw------- 1 boinc boinc 207050045 Oct 16 05:46 HITS.pool.root.1
[2025-10-16 05:48:01] -rw------- 1 boinc boinc    962560 Oct 16 05:48 result.tar.gz
05:48:03 (290613): run_atlas exited; CPU time 24416.627108
05:48:03 (290613): called boinc_finish(0)

</stderr_txt>
]]>

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