Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:14:13 (3683074): wrapper (7.7.26015): starting
06:14:13 (3683074): wrapper: running run_atlas (--nthreads 3)
[2025-10-16 06:14:13] Arguments: --nthreads 3
[2025-10-16 06:14:13] Threads: 3
[2025-10-16 06:14:13] Checking for CVMFS
[2025-10-16 06:14:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 06:14:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 06:14:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 06:14:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 06:14:13] 2.9.2.0 3608131 270 58044 151759 2 56 4586706 36864001 0 130560 0 197296 99.983 13390 1671 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-16 06:14:13] CVMFS is ok
[2025-10-16 06:14:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 06:14:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 06:14:13] Further information can be found at the LHC@home message board.
[2025-10-16 06:14:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 06:14:13] Checking for apptainer binary...
[2025-10-16 06:14:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 06:14:13] Running /usr/bin/apptainer --version
[2025-10-16 06:14:13] apptainer version 1.4.1-1.1
[2025-10-16 06:14:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 06:14:13] cosA121b
[2025-10-16 06:14:13] apptainer works
[2025-10-16 06:14:13] Set ATHENA_PROC_NUMBER=3
[2025-10-16 06:14:13] Set ATHENA_CORE_NUMBER=3
[2025-10-16 06:14:13] Starting ATLAS job with PandaID=6846766319
[2025-10-16 06:14:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 07:52:31]  *** The last 200 lines of the pilot log: ***
[2025-10-16 07:52:31]  status_code=0
[2025-10-16 07:52:31]  storage_token=
[2025-10-16 07:52:31]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6846766319/log.46771637._000024.job.log.tgz.1
[2025-10-16 07:52:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/43/log.46771637._000024.job.log.tgz.1
[2025-10-16 07:52:31]  workdir=None
[2025-10-16 07:52:31] ]
[2025-10-16 07:52:31] 2025-10-16 05:51:36,835 | INFO     | transferring file log.46771637._000024.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6846766319/log.46771637._000024.job.log.tgz.1 to /local/data/boinc/
[2025-10-16 07:52:31] 2025-10-16 05:51:36,835 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6846766319/log.46771637._000024.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._0000
[2025-10-16 07:52:31] 2025-10-16 05:51:36,847 | INFO     | adding to output.list: log.46771637._000024.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/43/log.46771637._000024.job.log.tg
[2025-10-16 07:52:31] 2025-10-16 05:51:36,848 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-16 07:52:31] 2025-10-16 05:51:36,848 | INFO     | summary of transferred files:
[2025-10-16 07:52:31] 2025-10-16 05:51:36,848 | INFO     |  -- lfn=log.46771637._000024.job.log.tgz.1, status_code=0, status=transferred
[2025-10-16 07:52:31] 2025-10-16 05:51:36,848 | INFO     | stage-out finished correctly
[2025-10-16 07:52:31] 2025-10-16 05:51:37,066 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-16 07:52:31] 2025-10-16 05:51:37,098 | INFO     | job 6846766319 has state=finished
[2025-10-16 07:52:31] 2025-10-16 05:51:37,098 | INFO     | preparing for final server update for job 6846766319 in state='finished'
[2025-10-16 07:52:31] 2025-10-16 05:51:37,098 | INFO     | this job has now completed (state=finished)
[2025-10-16 07:52:31] 2025-10-16 05:51:37,098 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-16 07:52:31] 2025-10-16 05:51:37,098 | INFO     | log transfer has been attempted: DONE
[2025-10-16 07:52:31] 2025-10-16 05:51:37,098 | INFO     | job 6846766319 has finished - writing final server update
[2025-10-16 07:52:31] 2025-10-16 05:51:37,098 | INFO     | total number of processed events: 400 (read)
[2025-10-16 07:52:31] 2025-10-16 05:51:37,099 | INFO     | executing command: lscpu
[2025-10-16 07:52:31] 2025-10-16 05:51:37,111 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-16 07:52:31] 2025-10-16 05:51:38,224 | INFO     | time since job start (5839s) is within the limit (172800.0s)
[2025-10-16 07:52:31] 2025-10-16 05:51:39,362 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-16 07:52:31] 2025-10-16 05:51:39,363 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3601.9935833333334
[2025-10-16 07:52:31] 2025-10-16 05:51:39,364 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6846766319/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 07:52:31] 2025-10-16 05:51:39,365 | INFO     | extracted standard info from prmon json
[2025-10-16 07:52:31] 2025-10-16 05:51:39,365 | INFO     | extracted standard memory fields from prmon json
[2025-10-16 07:52:31] 2025-10-16 05:51:39,365 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-16 07:52:31] 2025-10-16 05:51:39,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 07:52:31] 2025-10-16 05:51:39,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | fitting pss+swap vs Time
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | sum of square deviations: 218571540.0
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | sum of deviations: -12519737722.0
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | mean x: 1760591067.0
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | mean y: 2512533.842696629
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | -- intersect: 100848845933.58966
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | intersect: 100848845933.58966
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | chi2: 0.055384129385035966
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | -- intersect: 100848845933.58966
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | current memory leak: -57.28 B/s (using 89 data points, chi2=0.06)
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | could have reported an average CPU frequency of 3896 MHz (7 samples)
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | ..............................
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | . Timing measurements:
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | . get job = 0 s
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | . initial setup = 1 s
[2025-10-16 07:52:31] 2025-10-16 05:51:39,366 | INFO     | . payload setup = 2 s
[2025-10-16 07:52:31] 2025-10-16 05:51:39,367 | INFO     | . stage-in = 0 s
[2025-10-16 07:52:31] 2025-10-16 05:51:39,367 | INFO     | . payload execution = 5817 s
[2025-10-16 07:52:31] 2025-10-16 05:51:39,367 | INFO     | . stage-out = 0 s
[2025-10-16 07:52:31] 2025-10-16 05:51:39,367 | INFO     | . log creation = 0 s
[2025-10-16 07:52:31] 2025-10-16 05:51:39,367 | INFO     | ..............................
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | 
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | job summary report
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | --------------------------------------------------
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | PanDA job id: 6846766319
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | task id: 46771637
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | errors: (none)
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | pilot state: finished 
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | transexitcode: 0
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | exeerrorcode: 0
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | exeerrordiag: 
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | exitcode: 0
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | exitmsg: OK
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | cpuconsumptiontime: 16827 s
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | nevents: 400
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | neventsw: 0
[2025-10-16 07:52:31] 2025-10-16 05:51:39,398 | INFO     | pid: 3693224
[2025-10-16 07:52:31] 2025-10-16 05:51:39,399 | INFO     | pgrp: 3693224
[2025-10-16 07:52:31] 2025-10-16 05:51:39,399 | INFO     | corecount: 3
[2025-10-16 07:52:31] 2025-10-16 05:51:39,399 | INFO     | event service: False
[2025-10-16 07:52:31] 2025-10-16 05:51:39,399 | INFO     | sizes: {0: 2348911, 3: 2349173, 11: 2349201, 5823: 2376062, 5824: 2376061, 5825: 2385305, 5827: 2385443}
[2025-10-16 07:52:31] 2025-10-16 05:51:39,399 | INFO     | --------------------------------------------------
[2025-10-16 07:52:31] 2025-10-16 05:51:39,399 | INFO     | 
[2025-10-16 07:52:31] 2025-10-16 05:51:39,399 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,411 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 07:52:31] 2025-10-16 05:51:39,411 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,411 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 07:52:31] 2025-10-16 05:51:39,411 | INFO     | job 6846766319 has completed (purged errors)
[2025-10-16 07:52:31] 2025-10-16 05:51:39,411 | INFO     | overall cleanup function is called
[2025-10-16 07:52:31] 2025-10-16 05:51:40,417 | INFO     | --- collectZombieJob: --- 10, [3693224]
[2025-10-16 07:52:31] 2025-10-16 05:51:40,418 | INFO     | zombie collector waiting for pid 3693224
[2025-10-16 07:52:31] 2025-10-16 05:51:40,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 07:52:31] 2025-10-16 05:51:40,418 | INFO     | collected zombie processes
[2025-10-16 07:52:31] 2025-10-16 05:51:40,418 | INFO     | will attempt to kill all subprocesses of pid=3693224
[2025-10-16 07:52:31] 2025-10-16 05:51:40,460 | INFO     | process IDs to be killed: [3693224] (in reverse order)
[2025-10-16 07:52:31] 2025-10-16 05:51:40,483 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 07:52:31] 2025-10-16 05:51:40,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 07:52:31] 2025-10-16 05:51:40,485 | INFO     | did not find any defunct processes belonging to 3693224
[2025-10-16 07:52:31] 2025-10-16 05:51:40,486 | INFO     | did not find any defunct processes belonging to 3693224
[2025-10-16 07:52:31] 2025-10-16 05:51:40,486 | INFO     | ready for new job
[2025-10-16 07:52:31] 2025-10-16 05:51:40,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 07:52:31] 2025-10-16 05:51:40,486 | INFO     | ***************************************
[2025-10-16 07:52:31] 2025-10-16 05:51:40,486 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 07:52:31] 2025-10-16 05:51:40,486 | INFO     | ***************************************
[2025-10-16 07:52:31] 2025-10-16 05:51:40,486 | INFO     | 
[2025-10-16 07:52:31] 2025-10-16 05:51:40,487 | INFO     | architecture information:
[2025-10-16 07:52:31] 2025-10-16 05:51:40,487 | INFO     | executing command: cat /etc/os-release
[2025-10-16 07:52:31] 2025-10-16 05:51:40,495 | INFO     | cat /etc/os-release:
[2025-10-16 07:52:31] NAME="CentOS Linux"
[2025-10-16 07:52:31] VERSION="7 (Core)"
[2025-10-16 07:52:31] ID="centos"
[2025-10-16 07:52:31] ID_LIKE="rhel fedora"
[2025-10-16 07:52:31] VERSION_ID="7"
[2025-10-16 07:52:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 07:52:31] ANSI_COLOR="0;31"
[2025-10-16 07:52:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 07:52:31] HOME_URL="https://www.centos.org/"
[2025-10-16 07:52:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 07:52:31] 
[2025-10-16 07:52:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 07:52:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 07:52:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 07:52:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 07:52:31] 
[2025-10-16 07:52:31] 2025-10-16 05:51:40,495 | INFO     | ***************************************
[2025-10-16 07:52:31] 2025-10-16 05:51:40,599 | WARNING  | process 3693224 can no longer be monitored (due to stat problems) - aborting
[2025-10-16 07:52:31] 2025-10-16 05:51:40,628 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 07:52:31] 2025-10-16 05:51:40,628 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-16 07:52:31] 2025-10-16 05:51:40,628 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-16 07:52:31] 2025-10-16 05:51:40,628 | WARNING  | maxPSS not found in memory monitor output
[2025-10-16 07:52:31] 2025-10-16 05:51:40,628 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6846766319/payload.stdout) since it has not been created yet
[2025-10-16 07:52:31] 2025-10-16 05:51:40,628 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-16 07:52:31] 2025-10-16 05:51:40,638 | INFO     | sufficient remaining disk space (356223287296 B)
[2025-10-16 07:52:31] 2025-10-16 05:51:40,639 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-10-16 07:52:31] 2025-10-16 05:51:40,639 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6846766319/HITS.46771637._000024.pool.root.1 since it does not exist
[2025-10-16 07:52:31] 2025-10-16 05:51:40,677 | INFO     | number of running child processes to parent process 3693224: 1
[2025-10-16 07:52:31] 2025-10-16 05:51:40,677 | INFO     | maximum number of monitored processes: 6
[2025-10-16 07:52:31] 2025-10-16 05:51:40,677 | INFO     | aborting job monitoring since job object (job id=6846766319) has expired
[2025-10-16 07:52:31] 2025-10-16 05:51:40,998 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-16 07:52:31] 2025-10-16 05:51:41,011 | INFO     | sufficient remaining disk space (356223287296 B)
[2025-10-16 07:52:31] 2025-10-16 05:51:41,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 07:52:31] 2025-10-16 05:51:41,011 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 07:52:31] 2025-10-16 05:51:41,011 | INFO     | update_server=False
[2025-10-16 07:52:31] 2025-10-16 05:51:41,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 07:52:31] 2025-10-16 05:51:41,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 07:52:31] 2025-10-16 05:51:41,012 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 07:52:31] 2025-10-16 05:51:41,012 | INFO     | will abort loop
[2025-10-16 07:52:31] 2025-10-16 05:51:41,946 | INFO     | all data control threads have been joined
[2025-10-16 07:52:31] 2025-10-16 05:51:42,014 | INFO     | [job] retrieve thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:42,016 | INFO     | [job] queue monitor thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:42,017 | INFO     | [job] job monitor thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:42,034 | INFO     | [payload] validate_post thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:42,132 | INFO     | all payload control threads have been joined
[2025-10-16 07:52:31] 2025-10-16 05:51:42,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 07:52:31] 2025-10-16 05:51:42,478 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:42,478 | INFO     | [job] validate thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:42,608 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:42,617 | INFO     | all job control threads have been joined
[2025-10-16 07:52:31] 2025-10-16 05:51:42,743 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:42,952 | INFO     | [data] control thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:43,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 07:52:31] 2025-10-16 05:51:43,121 | INFO     | [payload] failed_post thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:43,138 | INFO     | [payload] control thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:43,374 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:43,473 | INFO     | [data] copytool_in thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:43,622 | INFO     | [job] control thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:44,398 | INFO     | [data] copytool_out thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:51:47,111 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 07:52:31] 2025-10-16 05:52:11,337 | INFO     | PID=3686792 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-16 07:52:31] 2025-10-16 05:52:11,337 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 07:52:31] 2025-10-16 05:52:11,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 07:52:31] 2025-10-16 05:52:11,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 07:52:31] 2025-10-16 05:52:25,456 | INFO     | [monitor] cgroup control has ended
[2025-10-16 07:52:31] 2025-10-16 05:52:26,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140124501043008)>', '<ExcThread(monitor, started 140124146874112)>']
[2025-10-16 07:52:31] 2025-10-16 05:52:26,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 07:52:31] 2025-10-16 05:52:26,402 | INFO     | [monitor] control thread has ended
[2025-10-16 07:52:31] 2025-10-16 05:52:31,212 | INFO     | all workflow threads have been joined
[2025-10-16 07:52:31] 2025-10-16 05:52:31,212 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 07:52:31] 2025-10-16 05:52:31,212 | INFO     | traces error code: 0
[2025-10-16 07:52:31] 2025-10-16 05:52:31,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 07:52:31] 2025-10-16 05:52:31,263 [wrapper] ==== pilot stdout END ====
[2025-10-16 07:52:31] 2025-10-16 05:52:31,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 07:52:31] 2025-10-16 05:52:31,267 [wrapper] pilotpid: 3686792
[2025-10-16 07:52:31] 2025-10-16 05:52:31,269 [wrapper] Pilot exit status: 0
[2025-10-16 07:52:31] 2025-10-16 05:52:31,276 [wrapper] pandaids: 6846766319
[2025-10-16 07:52:31] 2025-10-16 05:52:31,292 [wrapper] cleanup supervisor_pilot 3705266 3686793
[2025-10-16 07:52:31] 2025-10-16 05:52:31,295 [wrapper] Test setup, not cleaning
[2025-10-16 07:52:31] 2025-10-16 05:52:31,297 [wrapper] apfmon messages muted
[2025-10-16 07:52:31] 2025-10-16 05:52:31,299 [wrapper] ==== wrapper stdout END ====
[2025-10-16 07:52:31] 2025-10-16 05:52:31,301 [wrapper] ==== wrapper stderr END ====
[2025-10-16 07:52:31]  *** Error codes and diagnostics ***
[2025-10-16 07:52:31]     "exeErrorCode": 0,
[2025-10-16 07:52:31]     "exeErrorDiag": "",
[2025-10-16 07:52:31]     "pilotErrorCode": 0,
[2025-10-16 07:52:31]     "pilotErrorDiag": "",
[2025-10-16 07:52:31]  *** Listing of results directory ***
[2025-10-16 07:52:31] total 441668
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc    557409 Oct 16 01:33 pilot3.tar.gz
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc      5112 Oct 16 01:39 queuedata.json
[2025-10-16 07:52:31] -rwx------ 1 boinc boinc     36292 Oct 16 01:41 runpilot2-wrapper.sh
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc       100 Oct 16 06:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 07:52:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 06:14 run_atlas
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc       105 Oct 16 06:14 job.xml
[2025-10-16 07:52:31] -rw-r--r-- 2 boinc boinc 227918943 Oct 16 06:14 EVNT.46771634._000009.pool.root.1
[2025-10-16 07:52:31] -rw-r--r-- 2 boinc boinc    569664 Oct 16 06:14 input.tar.gz
[2025-10-16 07:52:31] -rw-r--r-- 2 boinc boinc     15120 Oct 16 06:14 start_atlas.sh
[2025-10-16 07:52:31] drwxrwx--x 2 boinc boinc      4096 Oct 16 06:14 shared
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc         0 Oct 16 06:14 boinc_setup_complete
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc      6440 Oct 16 06:14 init_data.xml
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc         0 Oct 16 06:14 boinc_lockfile
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc      2547 Oct 16 06:14 pandaJob.out
[2025-10-16 07:52:31] -rw------- 1 boinc boinc    974310 Oct 16 06:14 agis_schedconf.cvmfs.json
[2025-10-16 07:52:31] -rw------- 1 boinc boinc   1560740 Oct 16 06:14 agis_ddmendpoints.agis.ALL.json
[2025-10-16 07:52:31] drwx------ 5 boinc boinc      4096 Oct 16 06:14 pilot3
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc       529 Oct 16 07:51 boinc_task_state.xml
[2025-10-16 07:52:31] -rw------- 1 boinc boinc 218189130 Oct 16 07:51 HITS.46771637._000024.pool.root.1
[2025-10-16 07:52:31] -rw------- 1 boinc boinc      1022 Oct 16 07:51 memory_monitor_summary.json
[2025-10-16 07:52:31] -rw------- 1 boinc boinc    280037 Oct 16 07:51 log.46771637._000024.job.log.tgz.1
[2025-10-16 07:52:31] -rw------- 1 boinc boinc      7759 Oct 16 07:51 heartbeat.json
[2025-10-16 07:52:31] -rw------- 1 boinc boinc        95 Oct 16 07:52 pilot_heartbeat.json
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc      8192 Oct 16 07:52 boinc_mmap_file
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc        27 Oct 16 07:52 wrapper_checkpoint.txt
[2025-10-16 07:52:31] -rw------- 1 boinc boinc      6253 Oct 16 07:52 pilotlog.txt
[2025-10-16 07:52:31] -rw------- 1 boinc boinc    849585 Oct 16 07:52 log.46771637._000024.job.log.1
[2025-10-16 07:52:31] -rw------- 1 boinc boinc       357 Oct 16 07:52 output.list
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc       620 Oct 16 07:52 runtime_log
[2025-10-16 07:52:31] -rw------- 1 boinc boinc   1146880 Oct 16 07:52 result.tar.gz
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc      8787 Oct 16 07:52 runtime_log.err
[2025-10-16 07:52:31] -rw------- 1 boinc boinc       661 Oct 16 07:52 X23MDmKIQT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwznNDmITRBKn.diag
[2025-10-16 07:52:31] -rw-r--r-- 1 boinc boinc     22274 Oct 16 07:52 stderr.txt
[2025-10-16 07:52:31] HITS file was successfully produced:
[2025-10-16 07:52:31] -rw------- 1 boinc boinc 218189130 Oct 16 07:51 shared/HITS.pool.root.1
[2025-10-16 07:52:31]  *** Contents of shared directory: ***
[2025-10-16 07:52:31] total 437360
[2025-10-16 07:52:31] -rw-r--r-- 2 boinc boinc 227918943 Oct 16 06:14 ATLAS.root_0
[2025-10-16 07:52:31] -rw-r--r-- 2 boinc boinc    569664 Oct 16 06:14 input.tar.gz
[2025-10-16 07:52:31] -rw-r--r-- 2 boinc boinc     15120 Oct 16 06:14 start_atlas.sh
[2025-10-16 07:52:31] -rw------- 1 boinc boinc 218189130 Oct 16 07:51 HITS.pool.root.1
[2025-10-16 07:52:31] -rw------- 1 boinc boinc   1146880 Oct 16 07:52 result.tar.gz
07:52:32 (3683074): run_atlas exited; CPU time 16848.614422
07:52:32 (3683074): called boinc_finish(0)

</stderr_txt>
]]>

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