Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:01:45 (2044146): wrapper (7.7.26015): starting
17:01:45 (2044146): wrapper: running run_atlas (--nthreads 11)
[2025-10-15 17:01:45] Arguments: --nthreads 11
[2025-10-15 17:01:45] Threads: 11
[2025-10-15 17:01:45] Checking for CVMFS
[2025-10-15 17:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 17:01:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 17:01:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 17:01:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 17:01:45] 2.13.2.0 3090366 3268 212832 151747 1 828 21059547 32503808 51854 16776704 0 63223334 99.856 20838735 27988 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-15 17:01:45] CVMFS is ok
[2025-10-15 17:01:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 17:01:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 17:01:45] Further information can be found at the LHC@home message board.
[2025-10-15 17:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 17:01:45] Checking for apptainer binary...
[2025-10-15 17:01:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 17:01:45] Running /usr/bin/apptainer --version
[2025-10-15 17:01:45] apptainer version 1.4.3-1.el9
[2025-10-15 17:01:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 17:01:46] c8-7-2.aglt2.org
[2025-10-15 17:01:46] apptainer works
[2025-10-15 17:01:46] Set ATHENA_PROC_NUMBER=11
[2025-10-15 17:01:46] Set ATHENA_CORE_NUMBER=11
[2025-10-15 17:01:46] Starting ATLAS job with PandaID=6837327578
[2025-10-15 17:01:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 17:38:07]  *** The last 200 lines of the pilot log: ***
[2025-10-15 17:38:07]  storage_token=
[2025-10-15 17:38:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837327578/log.46676269._013094.job.log.tgz.1
[2025-10-15 17:38:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/0d/log.46676269._013094.job.log.tgz.1
[2025-10-15 17:38:07]  workdir=None
[2025-10-15 17:38:07] ]
[2025-10-15 17:38:07] 2025-10-15 21:37:26,006 | INFO     | transferring file log.46676269._013094.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837327578/log.46676269._013094.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-15 17:38:07] 2025-10-15 21:37:26,006 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837327578/log.46676269._013094.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._013094.job
[2025-10-15 17:38:07] 2025-10-15 21:37:26,020 | INFO     | adding to output.list: log.46676269._013094.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/0d/log.46676269._013094.job.log.tg
[2025-10-15 17:38:07] 2025-10-15 21:37:26,020 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-15 17:38:07] 2025-10-15 21:37:26,020 | INFO     | summary of transferred files:
[2025-10-15 17:38:07] 2025-10-15 21:37:26,020 | INFO     |  -- lfn=log.46676269._013094.job.log.tgz.1, status_code=0, status=transferred
[2025-10-15 17:38:07] 2025-10-15 21:37:26,021 | INFO     | stage-out finished correctly
[2025-10-15 17:38:07] 2025-10-15 21:37:27,476 | INFO     | time since job start (2131s) is within the limit (172800.0s)
[2025-10-15 17:38:07] 2025-10-15 21:37:27,864 | INFO     | monitor loop #158: job 0:6837327578 is in state 'finished'
[2025-10-15 17:38:07] 2025-10-15 21:37:27,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-15 17:38:07] 2025-10-15 21:37:29,183 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-15 17:38:07] 2025-10-15 21:37:29,484 | INFO     | time since job start (2133s) is within the limit (172800.0s)
[2025-10-15 17:38:07] 2025-10-15 21:37:30,289 | INFO     | job 6837327578 has state=finished
[2025-10-15 17:38:07] 2025-10-15 21:37:30,289 | INFO     | preparing for final server update for job 6837327578 in state='finished'
[2025-10-15 17:38:07] 2025-10-15 21:37:30,290 | INFO     | this job has now completed (state=finished)
[2025-10-15 17:38:07] 2025-10-15 21:37:30,290 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-15 17:38:07] 2025-10-15 21:37:30,290 | INFO     | log transfer has been attempted: DONE
[2025-10-15 17:38:07] 2025-10-15 21:37:30,290 | INFO     | job 6837327578 has finished - writing final server update
[2025-10-15 17:38:07] 2025-10-15 21:37:30,290 | INFO     | total number of processed events: 400 (read)
[2025-10-15 17:38:07] 2025-10-15 21:37:30,291 | INFO     | executing command: lscpu
[2025-10-15 17:38:07] 2025-10-15 21:37:30,358 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-15 17:38:07] 2025-10-15 21:37:30,368 | INFO     | monitor loop #159: job 0:6837327578 is in state 'finished'
[2025-10-15 17:38:07] 2025-10-15 21:37:30,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-15 17:38:07] 2025-10-15 21:37:31,490 | INFO     | time since job start (2135s) is within the limit (172800.0s)
[2025-10-15 17:38:07] 2025-10-15 21:37:32,873 | INFO     | monitor loop #160: job 0:6837327578 is in state 'finished'
[2025-10-15 17:38:07] 2025-10-15 21:37:32,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-15 17:38:07] 2025-10-15 21:37:33,495 | INFO     | time since job start (2137s) is within the limit (172800.0s)
[2025-10-15 17:38:07] 2025-10-15 21:37:34,714 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-15 17:38:07] 2025-10-15 21:37:34,731 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3662.627601562501
[2025-10-15 17:38:07] 2025-10-15 21:37:34,745 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837327578/memory_monitor_summary.json (trf name=prmon)
[2025-10-15 17:38:07] 2025-10-15 21:37:34,745 | INFO     | extracted standard info from prmon json
[2025-10-15 17:38:07] 2025-10-15 21:37:34,745 | INFO     | extracted standard memory fields from prmon json
[2025-10-15 17:38:07] 2025-10-15 21:37:34,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-15 17:38:07] 2025-10-15 21:37:34,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-15 17:38:07] 2025-10-15 21:37:34,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-15 17:38:07] 2025-10-15 21:37:34,746 | INFO     | fitting pss+swap vs Time
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | sum of square deviations: 6798267.0
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | sum of deviations: -1851632521.5
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | mean x: 1760563271.5
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | mean y: 2468325.6785714286
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | -- intersect: 479524118426.7756
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | intersect: 479524118426.7756
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | chi2: 0.06471779755443825
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | -- intersect: 479524118426.7756
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | current memory leak: -272.37 B/s (using 28 data points, chi2=0.06)
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | could have reported an average CPU frequency of 3690 MHz (5 samples)
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | ..............................
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | . Timing measurements:
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | . get job = 0 s
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | . initial setup = 2 s
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | . payload setup = 5 s
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | . stage-in = 0 s
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | . payload execution = 2103 s
[2025-10-15 17:38:07] 2025-10-15 21:37:34,747 | INFO     | . stage-out = 0 s
[2025-10-15 17:38:07] 2025-10-15 21:37:34,748 | INFO     | . log creation = 0 s
[2025-10-15 17:38:07] 2025-10-15 21:37:34,748 | INFO     | ..............................
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | 
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | job summary report
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | --------------------------------------------------
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | PanDA job id: 6837327578
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | task id: 46676269
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | errors: (none)
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | pilot state: finished 
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | transexitcode: 0
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | exeerrorcode: 0
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | exeerrordiag: 
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | exitcode: 0
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | exitmsg: OK
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | cpuconsumptiontime: 20724 s
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | nevents: 400
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | neventsw: 0
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | pid: 2079561
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | pgrp: 2079561
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | corecount: 11
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | event service: False
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | sizes: {0: 2348920, 5: 2349182, 11: 2349238, 2113: 2374332, 2114: 2383330, 2117: 2383386, 2123: 2383740}
[2025-10-15 17:38:07] 2025-10-15 21:37:35,202 | INFO     | --------------------------------------------------
[2025-10-15 17:38:07] 2025-10-15 21:37:35,203 | INFO     | 
[2025-10-15 17:38:07] 2025-10-15 21:37:35,203 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,216 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | job 6837327578 has completed (purged errors)
[2025-10-15 17:38:07] 2025-10-15 21:37:35,217 | INFO     | overall cleanup function is called
[2025-10-15 17:38:07] 2025-10-15 21:37:36,223 | INFO     | --- collectZombieJob: --- 10, [2079561]
[2025-10-15 17:38:07] 2025-10-15 21:37:36,223 | INFO     | zombie collector waiting for pid 2079561
[2025-10-15 17:38:07] 2025-10-15 21:37:36,224 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 17:38:07] 2025-10-15 21:37:36,224 | INFO     | collected zombie processes
[2025-10-15 17:38:07] 2025-10-15 21:37:36,224 | INFO     | will attempt to kill all subprocesses of pid=2079561
[2025-10-15 17:38:07] 2025-10-15 21:37:36,721 | INFO     | process IDs to be killed: [2079561] (in reverse order)
[2025-10-15 17:38:07] 2025-10-15 21:37:36,914 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 17:38:07] 2025-10-15 21:37:36,914 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 17:38:07] 2025-10-15 21:37:36,939 | INFO     | did not find any defunct processes belonging to 2079561
[2025-10-15 17:38:07] 2025-10-15 21:37:36,965 | INFO     | did not find any defunct processes belonging to 2079561
[2025-10-15 17:38:07] 2025-10-15 21:37:36,965 | INFO     | ready for new job
[2025-10-15 17:38:07] 2025-10-15 21:37:36,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 17:38:07] 2025-10-15 21:37:36,966 | INFO     | ***************************************
[2025-10-15 17:38:07] 2025-10-15 21:37:36,966 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 17:38:07] 2025-10-15 21:37:36,966 | INFO     | ***************************************
[2025-10-15 17:38:07] 2025-10-15 21:37:36,966 | INFO     | 
[2025-10-15 17:38:07] 2025-10-15 21:37:36,969 | INFO     | architecture information:
[2025-10-15 17:38:07] 2025-10-15 21:37:36,969 | INFO     | executing command: cat /etc/os-release
[2025-10-15 17:38:07] 2025-10-15 21:37:36,981 | INFO     | cat /etc/os-release:
[2025-10-15 17:38:07] NAME="CentOS Linux"
[2025-10-15 17:38:07] VERSION="7 (Core)"
[2025-10-15 17:38:07] ID="centos"
[2025-10-15 17:38:07] ID_LIKE="rhel fedora"
[2025-10-15 17:38:07] VERSION_ID="7"
[2025-10-15 17:38:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 17:38:07] ANSI_COLOR="0;31"
[2025-10-15 17:38:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 17:38:07] HOME_URL="https://www.centos.org/"
[2025-10-15 17:38:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 17:38:07] 
[2025-10-15 17:38:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 17:38:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 17:38:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 17:38:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 17:38:07] 
[2025-10-15 17:38:07] 2025-10-15 21:37:36,982 | INFO     | ***************************************
[2025-10-15 17:38:07] 2025-10-15 21:37:37,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-15 17:38:07] 2025-10-15 21:37:37,498 | INFO     | sufficient remaining disk space (96662978560 B)
[2025-10-15 17:38:07] 2025-10-15 21:37:37,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 17:38:07] 2025-10-15 21:37:37,498 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 17:38:07] 2025-10-15 21:37:37,498 | INFO     | update_server=False
[2025-10-15 17:38:07] 2025-10-15 21:37:37,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 17:38:07] 2025-10-15 21:37:37,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 17:38:07] 2025-10-15 21:37:37,798 | INFO     | all payload control threads have been joined
[2025-10-15 17:38:07] 2025-10-15 21:37:37,882 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-15 17:38:07] 2025-10-15 21:37:37,883 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-15 17:38:07] 2025-10-15 21:37:37,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 17:38:07] 2025-10-15 21:37:37,883 | INFO     | will abort loop
[2025-10-15 17:38:07] 2025-10-15 21:37:38,102 | INFO     | all data control threads have been joined
[2025-10-15 17:38:07] 2025-10-15 21:37:38,504 | INFO     | [job] retrieve thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:38,657 | INFO     | all job control threads have been joined
[2025-10-15 17:38:07] 2025-10-15 21:37:38,726 | INFO     | [payload] validate_post thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:38,804 | INFO     | [payload] control thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:38,888 | INFO     | [job] job monitor thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:39,108 | INFO     | [data] control thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:39,306 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:39,321 | INFO     | [job] validate thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:39,373 | INFO     | [payload] failed_post thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:39,375 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:39,445 | INFO     | [data] copytool_in thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:39,466 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:39,504 | INFO     | [data] copytool_out thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:39,662 | INFO     | [job] control thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:39,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 17:38:07] 2025-10-15 21:37:39,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 17:38:07] 2025-10-15 21:37:40,808 | INFO     | [job] queue monitor thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:43,746 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:47,575 | INFO     | job.realtimelogging is not enabled
[2025-10-15 17:38:07] 2025-10-15 21:37:48,581 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 17:38:07] 2025-10-15 21:37:59,860 | INFO     | [monitor] cgroup control has ended
[2025-10-15 17:38:07] 2025-10-15 21:37:59,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140449022543680)>', '<ExcThread(monitor, started 140448307865344)>']
[2025-10-15 17:38:07] 2025-10-15 21:38:05,018 | INFO     | all workflow threads have been joined
[2025-10-15 17:38:07] 2025-10-15 21:38:05,019 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 17:38:07] 2025-10-15 21:38:05,019 | INFO     | traces error code: 0
[2025-10-15 17:38:07] 2025-10-15 21:38:05,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 17:38:07] 2025-10-15 21:38:07,217 | INFO     | PID=2056354 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-15 17:38:07] 2025-10-15 21:38:07,220 | INFO     | .. there are 67 such processes running
[2025-10-15 17:38:07] 2025-10-15 21:38:07,220 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 17:38:07] 2025-10-15 21:38:07,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 17:38:07] 2025-10-15 21:38:07,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 17:38:07] 2025-10-15 21:38:07,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 17:38:07] 2025-10-15 21:38:07,220 | CRITICAL | thread 'MainThread' is not alive
[2025-10-15 17:38:07] 2025-10-15 21:38:07,220 | INFO     | [monitor] control thread has ended
[2025-10-15 17:38:07] 2025-10-15 21:38:07,457 [wrapper] ==== pilot stdout END ====
[2025-10-15 17:38:07] 2025-10-15 21:38:07,462 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 17:38:07] 2025-10-15 21:38:07,465 [wrapper] pilotpid: 2056354
[2025-10-15 17:38:07] 2025-10-15 21:38:07,468 [wrapper] Pilot exit status: 0
[2025-10-15 17:38:07] 2025-10-15 21:38:07,478 [wrapper] pandaids: 6837327578
[2025-10-15 17:38:07] 2025-10-15 21:38:07,614 [wrapper] cleanup supervisor_pilot 2880654 2056355
[2025-10-15 17:38:07] 2025-10-15 21:38:07,617 [wrapper] Test setup, not cleaning
[2025-10-15 17:38:07] 2025-10-15 21:38:07,620 [wrapper] apfmon messages muted
[2025-10-15 17:38:07] 2025-10-15 21:38:07,623 [wrapper] ==== wrapper stdout END ====
[2025-10-15 17:38:07] 2025-10-15 21:38:07,625 [wrapper] ==== wrapper stderr END ====
[2025-10-15 17:38:07]  *** Error codes and diagnostics ***
[2025-10-15 17:38:07]     "exeErrorCode": 0,
[2025-10-15 17:38:07]     "exeErrorDiag": "",
[2025-10-15 17:38:07]     "pilotErrorCode": 0,
[2025-10-15 17:38:07]     "pilotErrorDiag": "",
[2025-10-15 17:38:07]  *** Listing of results directory ***
[2025-10-15 17:38:07] total 403944
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-15 17:38:07] -rwx------. 1 boincer umatlas     36292 Oct  9 06:42 runpilot2-wrapper.sh
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:44 queuedata.json
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas       100 Oct 15 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 17:38:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 15 17:01 run_atlas
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas       105 Oct 15 17:01 job.xml
[2025-10-15 17:38:07] -rw-r--r--. 2 boincer umatlas 218959904 Oct 15 17:01 EVNT.46676267._000531.pool.root.1
[2025-10-15 17:38:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 15 17:01 start_atlas.sh
[2025-10-15 17:38:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 15 17:01 shared
[2025-10-15 17:38:07] -rw-r--r--. 2 boincer umatlas    569685 Oct 15 17:01 input.tar.gz
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas         0 Oct 15 17:01 boinc_lockfile
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas      2550 Oct 15 17:01 pandaJob.out
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas    974310 Oct 15 17:01 agis_schedconf.cvmfs.json
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas   1560740 Oct 15 17:01 agis_ddmendpoints.agis.ALL.json
[2025-10-15 17:38:07] drwx------. 5 boincer umatlas      4096 Oct 15 17:01 pilot3
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas 189404852 Oct 15 17:37 HITS.46676269._013094.pool.root.1
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas       529 Oct 15 17:37 boinc_task_state.xml
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas      1038 Oct 15 17:37 memory_monitor_summary.json
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas        95 Oct 15 17:37 pilot_heartbeat.json
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas    343235 Oct 15 17:37 log.46676269._013094.job.log.tgz.1
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas      7781 Oct 15 17:37 heartbeat.json
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas      7160 Oct 15 17:37 init_data.xml
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas        27 Oct 15 17:38 wrapper_checkpoint.txt
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 15 17:38 boinc_mmap_file
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas       893 Oct 15 17:38 pilotlog.txt
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas    342722 Oct 15 17:38 log.46676269._013094.job.log.1
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas       357 Oct 15 17:38 output.list
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas       620 Oct 15 17:38 runtime_log
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas    706560 Oct 15 17:38 result.tar.gz
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas      8695 Oct 15 17:38 runtime_log.err
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas       650 Oct 15 17:38 JyOMDmbH3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGBZNDm4FkKDm.diag
[2025-10-15 17:38:07] -rw-r--r--. 1 boincer umatlas     22117 Oct 15 17:38 stderr.txt
[2025-10-15 17:38:07] HITS file was successfully produced:
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas 189404852 Oct 15 17:37 shared/HITS.pool.root.1
[2025-10-15 17:38:07]  *** Contents of shared directory: ***
[2025-10-15 17:38:07] total 400076
[2025-10-15 17:38:07] -rw-r--r--. 2 boincer umatlas 218959904 Oct 15 17:01 ATLAS.root_0
[2025-10-15 17:38:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 15 17:01 start_atlas.sh
[2025-10-15 17:38:07] -rw-r--r--. 2 boincer umatlas    569685 Oct 15 17:01 input.tar.gz
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas 189404852 Oct 15 17:37 HITS.pool.root.1
[2025-10-15 17:38:07] -rw-------. 1 boincer umatlas    706560 Oct 15 17:38 result.tar.gz
17:38:09 (2044146): run_atlas exited; CPU time 20774.149312
17:38:09 (2044146): called boinc_finish(0)

</stderr_txt>
]]>

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