Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:26:30 (615895): wrapper (7.7.26015): starting
20:26:30 (615895): wrapper: running run_atlas (--nthreads 12)
[2025-10-15 20:26:30] Arguments: --nthreads 12
[2025-10-15 20:26:30] Threads: 12
[2025-10-15 20:26:30] Checking for CVMFS
[2025-10-15 20:26:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 20:26:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 20:26:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 20:26:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 20:26:31] 2.13.2.0 1918225 2976 217336 151745 0 103 27645554 46080000 44577 130560 0 12731452 99.917 2920478 22080 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-15 20:26:31] CVMFS is ok
[2025-10-15 20:26:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 20:26:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 20:26:31] Further information can be found at the LHC@home message board.
[2025-10-15 20:26:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 20:26:31] Checking for apptainer binary...
[2025-10-15 20:26:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 20:26:31] Running /usr/bin/apptainer --version
[2025-10-15 20:26:31] apptainer version 1.4.2-1.el9
[2025-10-15 20:26:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 20:26:31] mff2104.farm.particle.cz
[2025-10-15 20:26:31] apptainer works
[2025-10-15 20:26:31] Set ATHENA_PROC_NUMBER=12
[2025-10-15 20:26:31] Set ATHENA_CORE_NUMBER=12
[2025-10-15 20:26:31] Starting ATLAS job with PandaID=6845704734
[2025-10-15 20:26:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 22:33:59]  *** The last 200 lines of the pilot log: ***
[2025-10-15 22:33:59]  status=None
[2025-10-15 22:33:59]  status_code=0
[2025-10-15 22:33:59]  storage_token=
[2025-10-15 22:33:59]  surl=/scratch/.boinc/slots/0/PanDA_Pilot-6845704734/log.46776533._004104.job.log.tgz.1
[2025-10-15 22:33:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/21/log.46776533._004104.job.log.tgz.1
[2025-10-15 22:33:59]  workdir=None
[2025-10-15 22:33:59] ]
[2025-10-15 22:33:59] 2025-10-15 19:30:58,057 | INFO     | transferring file log.46776533._004104.job.log.tgz.1 from /scratch/.boinc/slots/0/PanDA_Pilot-6845704734/log.46776533._004104.job.log.tgz.1 to /scratch/.boinc/slot
[2025-10-15 22:33:59] 2025-10-15 19:30:58,057 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/0/PanDA_Pilot-6845704734/log.46776533._004104.job.log.tgz.1 /scratch/.boinc/slots/0/log.46776533._004104.j
[2025-10-15 22:33:59] 2025-10-15 19:30:58,087 | INFO     | adding to output.list: log.46776533._004104.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/21/log.46776533._004104.job.log.tg
[2025-10-15 22:33:59] 2025-10-15 19:30:58,087 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-15 22:33:59] 2025-10-15 19:30:58,088 | INFO     | summary of transferred files:
[2025-10-15 22:33:59] 2025-10-15 19:30:58,088 | INFO     |  -- lfn=log.46776533._004104.job.log.tgz.1, status_code=0, status=transferred
[2025-10-15 22:33:59] 2025-10-15 19:30:58,088 | INFO     | stage-out finished correctly
[2025-10-15 22:33:59] 2025-10-15 19:30:58,175 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-15 22:33:59] 2025-10-15 19:30:58,261 | INFO     | job 6845704734 has state=finished
[2025-10-15 22:33:59] 2025-10-15 19:30:58,262 | INFO     | preparing for final server update for job 6845704734 in state='finished'
[2025-10-15 22:33:59] 2025-10-15 19:30:58,262 | INFO     | this job has now completed (state=finished)
[2025-10-15 22:33:59] 2025-10-15 19:30:58,262 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-15 22:33:59] 2025-10-15 19:30:58,262 | INFO     | log transfer has been attempted: DONE
[2025-10-15 22:33:59] 2025-10-15 19:30:58,262 | INFO     | job 6845704734 has finished - writing final server update
[2025-10-15 22:33:59] 2025-10-15 19:30:58,263 | INFO     | total number of processed events: 400 (read)
[2025-10-15 22:33:59] 2025-10-15 19:30:58,263 | INFO     | executing command: lscpu
[2025-10-15 22:33:59] 2025-10-15 19:30:58,340 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-15 22:33:59] 2025-10-15 19:30:58,409 | INFO     | time since job start (3850s) is within the limit (172800.0s)
[2025-10-15 22:33:59] 2025-10-15 19:31:00,416 | INFO     | time since job start (3852s) is within the limit (172800.0s)
[2025-10-15 22:33:59] 2025-10-15 19:31:01,196 | WARNING  | process 638113 can no longer be monitored (due to stat problems) - aborting
[2025-10-15 22:33:59] 2025-10-15 19:31:01,196 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6845704734/memory_monitor_summary.json (trf name=prmon)
[2025-10-15 22:33:59] 2025-10-15 19:31:01,785 | INFO     | number of running child processes to parent process 638113: 1
[2025-10-15 22:33:59] 2025-10-15 19:31:01,786 | INFO     | maximum number of monitored processes: 6
[2025-10-15 22:33:59] 2025-10-15 19:31:02,421 | INFO     | time since job start (3854s) is within the limit (172800.0s)
[2025-10-15 22:33:59] 2025-10-15 19:31:04,288 | INFO     | monitor loop #260: job 0:6845704734 is in state 'finished'
[2025-10-15 22:33:59] 2025-10-15 19:31:04,350 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-15 22:33:59] 2025-10-15 19:31:04,426 | INFO     | time since job start (3856s) is within the limit (172800.0s)
[2025-10-15 22:33:59] 2025-10-15 19:31:05,768 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-15 22:33:59] 2025-10-15 19:31:05,856 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2930.954572916667
[2025-10-15 22:33:59] 2025-10-15 19:31:05,886 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6845704734/memory_monitor_summary.json (trf name=prmon)
[2025-10-15 22:33:59] 2025-10-15 19:31:05,887 | INFO     | extracted standard info from prmon json
[2025-10-15 22:33:59] 2025-10-15 19:31:05,887 | INFO     | extracted standard memory fields from prmon json
[2025-10-15 22:33:59] 2025-10-15 19:31:05,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-15 22:33:59] 2025-10-15 19:31:05,888 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-15 22:33:59] 2025-10-15 19:31:05,888 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-15 22:33:59] 2025-10-15 19:31:05,890 | INFO     | fitting pss+swap vs Time
[2025-10-15 22:33:59] 2025-10-15 19:31:05,890 | INFO     | sum of square deviations: 54438230.0
[2025-10-15 22:33:59] 2025-10-15 19:31:05,890 | INFO     | sum of deviations: -1372489538.5
[2025-10-15 22:33:59] 2025-10-15 19:31:05,891 | INFO     | mean x: 1760554826.5
[2025-10-15 22:33:59] 2025-10-15 19:31:05,891 | INFO     | mean y: 2795777.339285714
[2025-10-15 22:33:59] 2025-10-15 19:31:05,891 | INFO     | -- intersect: 44389673920.27179
[2025-10-15 22:33:59] 2025-10-15 19:31:05,891 | INFO     | intersect: 44389673920.27179
[2025-10-15 22:33:59] 2025-10-15 19:31:05,891 | INFO     | chi2: 0.01585165669741637
[2025-10-15 22:33:59] 2025-10-15 19:31:05,891 | INFO     | -- intersect: 44389673920.27179
[2025-10-15 22:33:59] 2025-10-15 19:31:05,891 | INFO     | current memory leak: -25.21 B/s (using 56 data points, chi2=0.02)
[2025-10-15 22:33:59] 2025-10-15 19:31:05,892 | INFO     | could have reported an average CPU frequency of 2919 MHz (6 samples)
[2025-10-15 22:33:59] 2025-10-15 19:31:05,892 | INFO     | ..............................
[2025-10-15 22:33:59] 2025-10-15 19:31:05,892 | INFO     | . Timing measurements:
[2025-10-15 22:33:59] 2025-10-15 19:31:05,892 | INFO     | . get job = 0 s
[2025-10-15 22:33:59] 2025-10-15 19:31:05,892 | INFO     | . initial setup = 2 s
[2025-10-15 22:33:59] 2025-10-15 19:31:05,893 | INFO     | . payload setup = 9 s
[2025-10-15 22:33:59] 2025-10-15 19:31:05,893 | INFO     | . stage-in = 0 s
[2025-10-15 22:33:59] 2025-10-15 19:31:05,893 | INFO     | . payload execution = 3817 s
[2025-10-15 22:33:59] 2025-10-15 19:31:05,893 | INFO     | . stage-out = 0 s
[2025-10-15 22:33:59] 2025-10-15 19:31:05,893 | INFO     | . log creation = 0 s
[2025-10-15 22:33:59] 2025-10-15 19:31:05,893 | INFO     | ..............................
[2025-10-15 22:33:59] 2025-10-15 19:31:06,255 | INFO     | 
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | job summary report
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | --------------------------------------------------
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | PanDA job id: 6845704734
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | task id: 46776533
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | errors: (none)
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | pilot state: finished 
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | transexitcode: 0
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | exeerrorcode: 0
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | exeerrordiag: 
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | exitcode: 0
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | exitmsg: OK
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | cpuconsumptiontime: 40334 s
[2025-10-15 22:33:59] 2025-10-15 19:31:06,256 | INFO     | nevents: 400
[2025-10-15 22:33:59] 2025-10-15 19:31:06,257 | INFO     | neventsw: 0
[2025-10-15 22:33:59] 2025-10-15 19:31:06,257 | INFO     | pid: 638113
[2025-10-15 22:33:59] 2025-10-15 19:31:06,257 | INFO     | pgrp: 638113
[2025-10-15 22:33:59] 2025-10-15 19:31:06,257 | INFO     | corecount: 12
[2025-10-15 22:33:59] 2025-10-15 19:31:06,257 | INFO     | event service: False
[2025-10-15 22:33:59] 2025-10-15 19:31:06,257 | INFO     | sizes: {0: 2348699, 1: 2348954, 8: 2349216, 12: 2349244, 3831: 2375088, 3832: 2384272, 3840: 2384410}
[2025-10-15 22:33:59] 2025-10-15 19:31:06,257 | INFO     | --------------------------------------------------
[2025-10-15 22:33:59] 2025-10-15 19:31:06,257 | INFO     | 
[2025-10-15 22:33:59] 2025-10-15 19:31:06,257 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-10-15 22:33:59] 2025-10-15 19:31:06,284 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,285 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,285 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,285 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,287 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 22:33:59] 2025-10-15 19:31:06,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,287 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 22:33:59] 2025-10-15 19:31:06,287 | INFO     | job 6845704734 has completed (purged errors)
[2025-10-15 22:33:59] 2025-10-15 19:31:06,287 | INFO     | overall cleanup function is called
[2025-10-15 22:33:59] 2025-10-15 19:31:06,306 | INFO     | PID=622603 has CPU usage=18.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-15 22:33:59] 2025-10-15 19:31:06,307 | INFO     | .. there are 78 such processes running
[2025-10-15 22:33:59] 2025-10-15 19:31:07,297 | INFO     | --- collectZombieJob: --- 10, [638113]
[2025-10-15 22:33:59] 2025-10-15 19:31:07,297 | INFO     | zombie collector waiting for pid 638113
[2025-10-15 22:33:59] 2025-10-15 19:31:07,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 22:33:59] 2025-10-15 19:31:07,298 | INFO     | collected zombie processes
[2025-10-15 22:33:59] 2025-10-15 19:31:07,298 | INFO     | will attempt to kill all subprocesses of pid=638113
[2025-10-15 22:33:59] 2025-10-15 19:31:07,890 | INFO     | process IDs to be killed: [638113] (in reverse order)
[2025-10-15 22:33:59] 2025-10-15 19:31:08,109 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 22:33:59] 2025-10-15 19:31:08,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 22:33:59] 2025-10-15 19:31:08,136 | INFO     | did not find any defunct processes belonging to 638113
[2025-10-15 22:33:59] 2025-10-15 19:31:08,163 | INFO     | did not find any defunct processes belonging to 638113
[2025-10-15 22:33:59] 2025-10-15 19:31:08,163 | INFO     | ready for new job
[2025-10-15 22:33:59] 2025-10-15 19:31:08,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 22:33:59] 2025-10-15 19:31:08,165 | INFO     | ***************************************
[2025-10-15 22:33:59] 2025-10-15 19:31:08,165 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 22:33:59] 2025-10-15 19:31:08,165 | INFO     | ***************************************
[2025-10-15 22:33:59] 2025-10-15 19:31:08,165 | INFO     | 
[2025-10-15 22:33:59] 2025-10-15 19:31:08,171 | INFO     | architecture information:
[2025-10-15 22:33:59] 2025-10-15 19:31:08,172 | INFO     | executing command: cat /etc/os-release
[2025-10-15 22:33:59] 2025-10-15 19:31:08,206 | INFO     | cat /etc/os-release:
[2025-10-15 22:33:59] NAME="CentOS Linux"
[2025-10-15 22:33:59] VERSION="7 (Core)"
[2025-10-15 22:33:59] ID="centos"
[2025-10-15 22:33:59] ID_LIKE="rhel fedora"
[2025-10-15 22:33:59] VERSION_ID="7"
[2025-10-15 22:33:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 22:33:59] ANSI_COLOR="0;31"
[2025-10-15 22:33:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 22:33:59] HOME_URL="https://www.centos.org/"
[2025-10-15 22:33:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 22:33:59] 
[2025-10-15 22:33:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 22:33:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 22:33:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 22:33:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 22:33:59] 
[2025-10-15 22:33:59] 2025-10-15 19:31:08,206 | INFO     | ***************************************
[2025-10-15 22:33:59] 2025-10-15 19:31:08,708 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-10-15 22:33:59] 2025-10-15 19:31:08,735 | INFO     | sufficient remaining disk space (1675959992320 B)
[2025-10-15 22:33:59] 2025-10-15 19:31:08,735 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 22:33:59] 2025-10-15 19:31:08,736 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 22:33:59] 2025-10-15 19:31:08,736 | INFO     | update_server=False
[2025-10-15 22:33:59] 2025-10-15 19:31:08,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 22:33:59] 2025-10-15 19:31:08,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 22:33:59] 2025-10-15 19:31:08,737 | INFO     | aborting loop
[2025-10-15 22:33:59] 2025-10-15 19:31:08,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 22:33:59] 2025-10-15 19:31:08,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 22:33:59] 2025-10-15 19:31:08,904 | INFO     | all data control threads have been joined
[2025-10-15 22:33:59] 2025-10-15 19:31:09,005 | INFO     | all payload control threads have been joined
[2025-10-15 22:33:59] 2025-10-15 19:31:09,741 | INFO     | [job] retrieve thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:09,743 | INFO     | [job] job monitor thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:09,910 | INFO     | [data] control thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:09,953 | INFO     | [payload] failed_post thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:10,011 | INFO     | [payload] control thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:10,169 | INFO     | [job] validate thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:10,173 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:10,200 | INFO     | [data] copytool_in thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:10,211 | INFO     | all job control threads have been joined
[2025-10-15 22:33:59] 2025-10-15 19:31:10,650 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:10,654 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:10,744 | INFO     | [data] copytool_out thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:10,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:11,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 22:33:59] 2025-10-15 19:31:11,050 | INFO     | [payload] validate_post thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:11,216 | INFO     | [job] control thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:12,008 | INFO     | [job] queue monitor thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:12,785 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 22:33:59] 2025-10-15 19:31:39,140 | INFO     | PID=622603 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-15 22:33:59] 2025-10-15 19:31:39,140 | INFO     | .. there are 78 such processes running
[2025-10-15 22:33:59] 2025-10-15 19:31:39,140 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 22:33:59] 2025-10-15 19:31:39,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 22:33:59] 2025-10-15 19:31:39,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 22:33:59] 2025-10-15 19:31:54,344 | INFO     | [monitor] cgroup control has ended
[2025-10-15 22:33:59] 2025-10-15 19:31:55,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140222904563520)>', '<ExcThread(monitor, started 140222268425984)>']
[2025-10-15 22:33:59] 2025-10-15 19:31:56,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 22:33:59] 2025-10-15 19:31:56,227 | INFO     | [monitor] control thread has ended
[2025-10-15 22:33:59] 2025-10-15 19:32:00,659 | INFO     | all workflow threads have been joined
[2025-10-15 22:33:59] 2025-10-15 19:32:00,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 22:33:59] 2025-10-15 19:32:00,660 | INFO     | traces error code: 0
[2025-10-15 22:33:59] 2025-10-15 19:32:00,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 22:33:59] 2025-10-15 19:32:00,854 [wrapper] ==== pilot stdout END ====
[2025-10-15 22:33:59] 2025-10-15 19:32:00,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 22:33:59] 2025-10-15 19:32:00,864 [wrapper] pilotpid: 622603
[2025-10-15 22:33:59] 2025-10-15 19:32:00,867 [wrapper] Pilot exit status: 0
[2025-10-15 22:33:59] 2025-10-15 19:32:00,885 [wrapper] pandaids: 6845704734
[2025-10-15 22:33:59] 2025-10-15 19:32:01,032 [wrapper] cleanup supervisor_pilot  885125 622604
[2025-10-15 22:33:59] 2025-10-15 19:32:01,037 [wrapper] Test setup, not cleaning
[2025-10-15 22:33:59] 2025-10-15 19:32:01,043 [wrapper] apfmon messages muted
[2025-10-15 22:33:59] 2025-10-15 19:32:01,048 [wrapper] ==== wrapper stdout END ====
[2025-10-15 22:33:59] 2025-10-15 19:32:01,052 [wrapper] ==== wrapper stderr END ====
[2025-10-15 22:33:59]  *** Error codes and diagnostics ***
[2025-10-15 22:33:59]     "exeErrorCode": 0,
[2025-10-15 22:33:59]     "exeErrorDiag": "",
[2025-10-15 22:33:59]     "pilotErrorCode": 0,
[2025-10-15 22:33:59]     "pilotErrorDiag": "",
[2025-10-15 22:33:59]  *** Listing of results directory ***
[2025-10-15 22:33:59] total 429372
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc    557409 Oct 15 11:36 pilot3.tar.gz
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc      5112 Oct 15 11:50 queuedata.json
[2025-10-15 22:33:59] -rwx------ 1 boinc boinc     36292 Oct 15 11:53 runpilot2-wrapper.sh
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc       100 Oct 15 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 22:33:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 15 20:26 run_atlas
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc       105 Oct 15 20:26 job.xml
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc      6665 Oct 15 20:26 init_data.xml
[2025-10-15 22:33:59] -rw-r--r-- 2 boinc boinc 231325976 Oct 15 20:26 EVNT.46776529._000219.pool.root.1
[2025-10-15 22:33:59] -rw-r--r-- 2 boinc boinc     15120 Oct 15 20:26 start_atlas.sh
[2025-10-15 22:33:59] drwxrwx--x 2 boinc boinc      4096 Oct 15 20:26 shared
[2025-10-15 22:33:59] -rw-r--r-- 2 boinc boinc    569679 Oct 15 20:26 input.tar.gz
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc         0 Oct 15 20:26 boinc_lockfile
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc      2558 Oct 15 20:26 pandaJob.out
[2025-10-15 22:33:59] -rw------- 1 boinc boinc    974310 Oct 15 20:26 agis_schedconf.cvmfs.json
[2025-10-15 22:33:59] -rw------- 1 boinc boinc   1560740 Oct 15 20:26 agis_ddmendpoints.agis.ALL.json
[2025-10-15 22:33:59] drwx------ 5 boinc boinc      4096 Oct 15 20:26 pilot3
[2025-10-15 22:33:59] -rw------- 1 boinc boinc 202615460 Oct 15 21:30 HITS.46776533._004104.pool.root.1
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc       529 Oct 15 21:30 boinc_task_state.xml
[2025-10-15 22:33:59] -rw------- 1 boinc boinc        95 Oct 15 21:30 pilot_heartbeat.json
[2025-10-15 22:33:59] -rw------- 1 boinc boinc      1023 Oct 15 21:30 memory_monitor_summary.json
[2025-10-15 22:33:59] -rw------- 1 boinc boinc    360232 Oct 15 21:30 log.46776533._004104.job.log.tgz.1
[2025-10-15 22:33:59] -rw------- 1 boinc boinc      7783 Oct 15 21:31 heartbeat.json
[2025-10-15 22:33:59] -rw------- 1 boinc boinc      4826 Oct 15 21:32 pilotlog.txt
[2025-10-15 22:33:59] -rw------- 1 boinc boinc    557102 Oct 15 21:32 log.46776533._004104.job.log.1
[2025-10-15 22:33:59] -rw------- 1 boinc boinc       357 Oct 15 21:32 output.list
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc       620 Oct 15 21:32 runtime_log
[2025-10-15 22:33:59] -rw------- 1 boinc boinc    931840 Oct 15 21:32 result.tar.gz
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc      8764 Oct 15 21:32 runtime_log.err
[2025-10-15 22:33:59] -rw------- 1 boinc boinc       664 Oct 15 21:32 olgNDmaNDT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyFWMDmMOvTen.diag
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc        26 Oct 15 22:33 wrapper_checkpoint.txt
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc      8192 Oct 15 22:33 boinc_mmap_file
[2025-10-15 22:33:59] -rw-r--r-- 1 boinc boinc     22101 Oct 15 22:33 stderr.txt
[2025-10-15 22:33:59] HITS file was successfully produced:
[2025-10-15 22:33:59] -rw------- 1 boinc boinc 202615460 Oct 15 21:30 shared/HITS.pool.root.1
[2025-10-15 22:33:59]  *** Contents of shared directory: ***
[2025-10-15 22:33:59] total 425272
[2025-10-15 22:33:59] -rw-r--r-- 2 boinc boinc 231325976 Oct 15 20:26 ATLAS.root_0
[2025-10-15 22:33:59] -rw-r--r-- 2 boinc boinc     15120 Oct 15 20:26 start_atlas.sh
[2025-10-15 22:33:59] -rw-r--r-- 2 boinc boinc    569679 Oct 15 20:26 input.tar.gz
[2025-10-15 22:33:59] -rw------- 1 boinc boinc 202615460 Oct 15 21:30 HITS.pool.root.1
[2025-10-15 22:33:59] -rw------- 1 boinc boinc    931840 Oct 15 21:32 result.tar.gz
22:34:01 (615895): run_atlas exited; CPU time 40513.121010
22:34:01 (615895): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN