Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:45:43 (2583845): wrapper (7.7.26015): starting
09:45:43 (2583845): wrapper: running run_atlas (--nthreads 4)
[2025-10-15 09:45:43] Arguments: --nthreads 4
[2025-10-15 09:45:43] Threads: 4
[2025-10-15 09:45:43] Checking for CVMFS
[2025-10-15 09:45:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 09:45:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 09:45:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 09:45:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 09:45:49] 2.13.2.0 2584057 0 29748 151737 3 1 2840680 4096000 0 130560 0 0 0.000 1291 521 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-15 09:45:49] CVMFS is ok
[2025-10-15 09:45:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 09:45:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-15 09:45:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-15 09:45:49] Further information can be found at the LHC@home message board.
[2025-10-15 09:45:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 09:45:49] Checking for apptainer binary...
[2025-10-15 09:45:49] apptainer is not installed, using version from CVMFS
[2025-10-15 09:45:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 09:45:49] tower
[2025-10-15 09:45:49] apptainer works
[2025-10-15 09:45:49] Set ATHENA_PROC_NUMBER=4
[2025-10-15 09:45:49] Set ATHENA_CORE_NUMBER=4
[2025-10-15 09:45:49] Starting ATLAS job with PandaID=6845695604
[2025-10-15 09:45:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 11:29:44]  *** The last 200 lines of the pilot log: ***
[2025-10-15 11:29:44] 2025-10-15 16:29:09,852 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-15 11:29:44] 2025-10-15 16:29:11,170 | INFO     | time since job start (6181s) is within the limit (172800.0s)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,354 | INFO     | monitor loop #473: job 0:6845695604 is in state 'finished'
[2025-10-15 11:29:44] 2025-10-15 16:29:12,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,469 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-15 11:29:44] 2025-10-15 16:29:12,470 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3352.55775
[2025-10-15 11:29:44] 2025-10-15 16:29:12,471 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6845695604/memory_monitor_summary.json (trf name=prmon)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,471 | INFO     | extracted standard info from prmon json
[2025-10-15 11:29:44] 2025-10-15 16:29:12,471 | INFO     | extracted standard memory fields from prmon json
[2025-10-15 11:29:44] 2025-10-15 16:29:12,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-15 11:29:44] 2025-10-15 16:29:12,471 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-15 11:29:44] 2025-10-15 16:29:12,471 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-15 11:29:44] 2025-10-15 16:29:12,472 | INFO     | fitting pss+swap vs Time
[2025-10-15 11:29:44] 2025-10-15 16:29:12,472 | INFO     | sum of square deviations: 319447850.0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | sum of deviations: -11633570409.000002
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | mean x: 1760542642.0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | mean y: 2459983.693069307
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | -- intersect: 64117453350.38464
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | intersect: 64117453350.38464
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | chi2: 1.3953535158696804
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | sum of square deviations: 274312120.0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | sum of deviations: -10776491708.500004
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | mean x: 1760542489.5
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | mean y: 2462881.9270833335
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | -- intersect: 69166273582.52138
[2025-10-15 11:29:44] 2025-10-15 16:29:12,473 | INFO     | intersect: 69166273582.52138
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | chi2: 1.3871629319334717
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | current chi2=1.3871629319334717 (change=0.5869898805611067 %)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | right removable region: 95
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | sum of square deviations: 274312120.0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | sum of deviations: -19815377249.999996
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | mean x: 1760542794.5
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | mean y: 2486322.6458333335
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | -- intersect: 127178127113.82457
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | intersect: 127178127113.82457
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | chi2: 0.21986584834718084
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | current chi2=0.21986584834718084 (change=84.24300036896776 %)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,474 | INFO     | sum of square deviations: 233641590.0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | sum of deviations: -15489550477.0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | mean x: 1760542947.0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | mean y: 2470072.0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | -- intersect: 116719784161.85376
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | intersect: 116719784161.85376
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | chi2: 0.21167066702505608
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | current chi2=0.21167066702505608 (change=3.7273552867492654 %)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | left removable region: 20
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | sum of square deviations: 130793150.0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | sum of deviations: -5840085771.000001
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | mean x: 1760543069.0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | mean y: 2430697.466666667
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | -- intersect: 78612988868.89668
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | intersect: 78612988868.89668
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | chi2: 0.1400190574449478
[2025-10-15 11:29:44] 2025-10-15 16:29:12,475 | INFO     | -- intersect: 78612988868.89668
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | current memory leak: -44.65 B/s (using 75 data points, chi2=0.14)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | could have reported an average CPU frequency of 3307 MHz (7 samples)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | ..............................
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | . Timing measurements:
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | . get job = 0 s
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | . initial setup = 4 s
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | . payload setup = 3 s
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | . stage-in = 0 s
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | . payload execution = 6145 s
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | . stage-out = 0 s
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | . log creation = 0 s
[2025-10-15 11:29:44] 2025-10-15 16:29:12,476 | INFO     | ..............................
[2025-10-15 11:29:44] 2025-10-15 16:29:12,515 | INFO     | 
[2025-10-15 11:29:44] 2025-10-15 16:29:12,515 | INFO     | job summary report
[2025-10-15 11:29:44] 2025-10-15 16:29:12,515 | INFO     | --------------------------------------------------
[2025-10-15 11:29:44] 2025-10-15 16:29:12,515 | INFO     | PanDA job id: 6845695604
[2025-10-15 11:29:44] 2025-10-15 16:29:12,515 | INFO     | task id: 46776533
[2025-10-15 11:29:44] 2025-10-15 16:29:12,515 | INFO     | errors: (none)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,515 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 11:29:44] 2025-10-15 16:29:12,515 | INFO     | pilot state: finished 
[2025-10-15 11:29:44] 2025-10-15 16:29:12,515 | INFO     | transexitcode: 0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,515 | INFO     | exeerrorcode: 0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | exeerrordiag: 
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | exitcode: 0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | exitmsg: OK
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | cpuconsumptiontime: 23638 s
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | nevents: 400
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | neventsw: 0
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | pid: 2594451
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | pgrp: 2594451
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | corecount: 4
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | event service: False
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | sizes: {0: 2348765, 1: 2348964, 3: 2349226, 11: 2349254, 6152: 2376309, 6153: 2385321, 6156: 2385505, 6168: 2385699}
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | --------------------------------------------------
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | 
[2025-10-15 11:29:44] 2025-10-15 16:29:12,516 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,528 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,528 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,528 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 11:29:44] 2025-10-15 16:29:12,528 | INFO     | job 6845695604 has completed (purged errors)
[2025-10-15 11:29:44] 2025-10-15 16:29:12,528 | INFO     | overall cleanup function is called
[2025-10-15 11:29:44] 2025-10-15 16:29:13,534 | INFO     | --- collectZombieJob: --- 10, [2594451]
[2025-10-15 11:29:44] 2025-10-15 16:29:13,535 | INFO     | zombie collector waiting for pid 2594451
[2025-10-15 11:29:44] 2025-10-15 16:29:13,535 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 11:29:44] 2025-10-15 16:29:13,535 | INFO     | collected zombie processes
[2025-10-15 11:29:44] 2025-10-15 16:29:13,535 | INFO     | will attempt to kill all subprocesses of pid=2594451
[2025-10-15 11:29:44] 2025-10-15 16:29:13,568 | INFO     | process IDs to be killed: [2594451] (in reverse order)
[2025-10-15 11:29:44] 2025-10-15 16:29:13,586 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 11:29:44] 2025-10-15 16:29:13,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 11:29:44] 2025-10-15 16:29:13,587 | INFO     | did not find any defunct processes belonging to 2594451
[2025-10-15 11:29:44] 2025-10-15 16:29:13,588 | INFO     | did not find any defunct processes belonging to 2594451
[2025-10-15 11:29:44] 2025-10-15 16:29:13,588 | INFO     | ready for new job
[2025-10-15 11:29:44] 2025-10-15 16:29:13,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 11:29:44] 2025-10-15 16:29:13,589 | INFO     | ***************************************
[2025-10-15 11:29:44] 2025-10-15 16:29:13,589 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 11:29:44] 2025-10-15 16:29:13,589 | INFO     | ***************************************
[2025-10-15 11:29:44] 2025-10-15 16:29:13,589 | INFO     | 
[2025-10-15 11:29:44] 2025-10-15 16:29:13,590 | INFO     | architecture information:
[2025-10-15 11:29:44] 2025-10-15 16:29:13,590 | INFO     | executing command: cat /etc/os-release
[2025-10-15 11:29:44] 2025-10-15 16:29:13,596 | INFO     | cat /etc/os-release:
[2025-10-15 11:29:44] NAME="CentOS Linux"
[2025-10-15 11:29:44] VERSION="7 (Core)"
[2025-10-15 11:29:44] ID="centos"
[2025-10-15 11:29:44] ID_LIKE="rhel fedora"
[2025-10-15 11:29:44] VERSION_ID="7"
[2025-10-15 11:29:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 11:29:44] ANSI_COLOR="0;31"
[2025-10-15 11:29:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 11:29:44] HOME_URL="https://www.centos.org/"
[2025-10-15 11:29:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 11:29:44] 
[2025-10-15 11:29:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 11:29:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 11:29:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 11:29:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 11:29:44] 
[2025-10-15 11:29:44] 2025-10-15 16:29:13,597 | INFO     | ***************************************
[2025-10-15 11:29:44] 2025-10-15 16:29:14,100 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-15 11:29:44] 2025-10-15 16:29:14,115 | INFO     | sufficient remaining disk space (75730255872 B)
[2025-10-15 11:29:44] 2025-10-15 16:29:14,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 11:29:44] 2025-10-15 16:29:14,115 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 11:29:44] 2025-10-15 16:29:14,116 | INFO     | update_server=False
[2025-10-15 11:29:44] 2025-10-15 16:29:14,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 11:29:44] 2025-10-15 16:29:14,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 11:29:44] 2025-10-15 16:29:14,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 11:29:44] 2025-10-15 16:29:14,116 | INFO     | aborting loop
[2025-10-15 11:29:44] 2025-10-15 16:29:14,477 | INFO     | all job control threads have been joined
[2025-10-15 11:29:44] 2025-10-15 16:29:14,534 | INFO     | all payload control threads have been joined
[2025-10-15 11:29:44] 2025-10-15 16:29:14,966 | INFO     | all data control threads have been joined
[2025-10-15 11:29:44] 2025-10-15 16:29:15,121 | INFO     | [job] retrieve thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:15,122 | INFO     | [job] queue monitor thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:15,122 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:15,123 | INFO     | [job] job monitor thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:15,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 11:29:44] 2025-10-15 16:29:15,482 | INFO     | [job] control thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:15,540 | INFO     | [payload] control thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:15,587 | INFO     | [data] copytool_in thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:15,624 | INFO     | [payload] failed_post thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:15,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 11:29:44] 2025-10-15 16:29:15,807 | INFO     | [job] validate thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:15,972 | INFO     | [data] control thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:15,976 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:16,037 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:16,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:16,360 | INFO     | [payload] validate_post thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:17,365 | INFO     | [data] copytool_out thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:19,813 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 11:29:44] 2025-10-15 16:29:20,094 | INFO     | [monitor] cgroup control has ended
[2025-10-15 11:29:44] 2025-10-15 16:29:21,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516315686720)>', '<ExcThread(monitor, started 140515399943936)>']
[2025-10-15 11:29:44] 2025-10-15 16:29:26,828 | INFO     | all workflow threads have been joined
[2025-10-15 11:29:44] 2025-10-15 16:29:26,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 11:29:44] 2025-10-15 16:29:26,829 | INFO     | traces error code: 0
[2025-10-15 11:29:44] 2025-10-15 16:29:26,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 11:29:44] 2025-10-15 16:29:44,250 | INFO     | PID=2588087 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-15 11:29:44] 2025-10-15 16:29:44,250 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 11:29:44] 2025-10-15 16:29:44,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 11:29:44] 2025-10-15 16:29:44,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 11:29:44] 2025-10-15 16:29:44,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 11:29:44] 2025-10-15 16:29:44,251 | INFO     | [monitor] control thread has ended
[2025-10-15 11:29:44] 2025-10-15 16:29:44,306 [wrapper] ==== pilot stdout END ====
[2025-10-15 11:29:44] 2025-10-15 16:29:44,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 11:29:44] 2025-10-15 16:29:44,310 [wrapper] pilotpid: 2588087
[2025-10-15 11:29:44] 2025-10-15 16:29:44,312 [wrapper] Pilot exit status: 0
[2025-10-15 11:29:44] 2025-10-15 16:29:44,317 [wrapper] pandaids: 6845695604
[2025-10-15 11:29:44] 2025-10-15 16:29:44,328 [wrapper] cleanup supervisor_pilot 2606905 2588088
[2025-10-15 11:29:44] 2025-10-15 16:29:44,330 [wrapper] Test setup, not cleaning
[2025-10-15 11:29:44] 2025-10-15 16:29:44,331 [wrapper] apfmon messages muted
[2025-10-15 11:29:44] 2025-10-15 16:29:44,333 [wrapper] ==== wrapper stdout END ====
[2025-10-15 11:29:44] 2025-10-15 16:29:44,334 [wrapper] ==== wrapper stderr END ====
[2025-10-15 11:29:44]  *** Error codes and diagnostics ***
[2025-10-15 11:29:44]     "exeErrorCode": 0,
[2025-10-15 11:29:44]     "exeErrorDiag": "",
[2025-10-15 11:29:44]     "pilotErrorCode": 0,
[2025-10-15 11:29:44]     "pilotErrorDiag": "",
[2025-10-15 11:29:44]  *** Listing of results directory ***
[2025-10-15 11:29:44] total 435000
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc    557409 Oct 15 04:36 pilot3.tar.gz
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc      5112 Oct 15 04:46 queuedata.json
[2025-10-15 11:29:44] -rwx------ 1 boinc boinc     36292 Oct 15 04:47 runpilot2-wrapper.sh
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc       100 Oct 15 09:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 11:29:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 15 09:45 run_atlas
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc       105 Oct 15 09:45 job.xml
[2025-10-15 11:29:44] -rw-r--r-- 2 boinc boinc     15120 Oct 15 09:45 start_atlas.sh
[2025-10-15 11:29:44] drwxrwx--x 2 boinc boinc      4096 Oct 15 09:45 shared
[2025-10-15 11:29:44] -rw-r--r-- 2 boinc boinc    569691 Oct 15 09:45 input.tar.gz
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc      6734 Oct 15 09:45 init_data.xml
[2025-10-15 11:29:44] -rw-r--r-- 2 boinc boinc 229160229 Oct 15 09:45 EVNT.46776529._000210.pool.root.1
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc         0 Oct 15 09:45 boinc_lockfile
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc      2561 Oct 15 09:45 pandaJob.out
[2025-10-15 11:29:44] -rw------- 1 boinc boinc    973863 Oct 15 09:46 agis_schedconf.cvmfs.json
[2025-10-15 11:29:44] -rw------- 1 boinc boinc   1560740 Oct 15 09:46 agis_ddmendpoints.agis.ALL.json
[2025-10-15 11:29:44] drwx------ 5 boinc boinc      4096 Oct 15 09:46 pilot3
[2025-10-15 11:29:44] -rw------- 1 boinc boinc 210003133 Oct 15 11:28 HITS.46776533._003893.pool.root.1
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc       529 Oct 15 11:28 boinc_task_state.xml
[2025-10-15 11:29:44] -rw------- 1 boinc boinc      1018 Oct 15 11:28 memory_monitor_summary.json
[2025-10-15 11:29:44] -rw------- 1 boinc boinc    289595 Oct 15 11:28 log.46776533._003893.job.log.tgz.1
[2025-10-15 11:29:44] -rw------- 1 boinc boinc      7749 Oct 15 11:29 heartbeat.json
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc        27 Oct 15 11:29 wrapper_checkpoint.txt
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc      8192 Oct 15 11:29 boinc_mmap_file
[2025-10-15 11:29:44] -rw------- 1 boinc boinc       747 Oct 15 11:29 pilotlog.txt
[2025-10-15 11:29:44] -rw------- 1 boinc boinc        95 Oct 15 11:29 pilot_heartbeat.json
[2025-10-15 11:29:44] -rw------- 1 boinc boinc    900694 Oct 15 11:29 log.46776533._003893.job.log.1
[2025-10-15 11:29:44] -rw------- 1 boinc boinc       357 Oct 15 11:29 output.list
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc       620 Oct 15 11:29 runtime_log
[2025-10-15 11:29:44] -rw------- 1 boinc boinc   1208320 Oct 15 11:29 result.tar.gz
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc      8736 Oct 15 11:29 runtime_log.err
[2025-10-15 11:29:44] -rw------- 1 boinc boinc       637 Oct 15 11:29 7X7KDmxHDT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmDWMDmEzAoFm.diag
[2025-10-15 11:29:44] -rw-r--r-- 1 boinc boinc     21238 Oct 15 11:29 stderr.txt
[2025-10-15 11:29:44] HITS file was successfully produced:
[2025-10-15 11:29:44] -rw------- 1 boinc boinc 210003133 Oct 15 11:28 shared/HITS.pool.root.1
[2025-10-15 11:29:44]  *** Contents of shared directory: ***
[2025-10-15 11:29:44] total 430640
[2025-10-15 11:29:44] -rw-r--r-- 2 boinc boinc     15120 Oct 15 09:45 start_atlas.sh
[2025-10-15 11:29:44] -rw-r--r-- 2 boinc boinc    569691 Oct 15 09:45 input.tar.gz
[2025-10-15 11:29:44] -rw-r--r-- 2 boinc boinc 229160229 Oct 15 09:45 ATLAS.root_0
[2025-10-15 11:29:44] -rw------- 1 boinc boinc 210003133 Oct 15 11:28 HITS.pool.root.1
[2025-10-15 11:29:44] -rw------- 1 boinc boinc   1208320 Oct 15 11:29 result.tar.gz
11:29:45 (2583845): run_atlas exited; CPU time 23671.763877
11:29:45 (2583845): called boinc_finish(0)

</stderr_txt>
]]>

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